Nucleotide Global Alignment

Description

• Query: TRCN0000472221
• Subject: XM_011530374.2
• Aligned Length: 1127
• Identities: 700
• Gaps: 403

Alignment

Query    1  ---------------------ATGAGGATGGAGGCCGGGGAGGCAGCGCCGCCGGCGGGGGCGGGCGGCCGCGC  53
                                 |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGCAGACGCCGCGGCCGGCGATGAGGATGGAGGCCGGGGAGGCAGCGCCGCCGGCGGGGGCGGGCGGCCGCGC  74

Query   54  CACAGGCGGCTGGGGCAAGTGGGTGCGGCTCAACGTGGGGGGCACGGTGTTCCTGACCACCCGGCAGACGCTGT  127
            |.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CGCAGGCGGCTGGGGCAAGTGGGTGCGGCTCAACGTGGGGGGCACGGTGTTCCTGACCACCCGGCAGACGCTGT  148

Query  128  GCCGCGAGCAGAAGTCCTTCCTCAGCCGCCTGTGCCAGGGGGAAGAGCTGCAGTCGGACCGGGATGAGACCGGG  201
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GCCGCGAGCAGAAGTCCTTCCTCAGCCGCCTGTGCCAGGGGGAAGAGCTGCAGTCGGACCGGGATGAGACCGGG  222

Query  202  GCCTACCTCATTGACCGTGACCCCACCTACTTCGGGCCCATCCTGAACTTCCTCCGGCATGGCAAGCTGGTGCT  275
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GCCTACCTCATTGACCGTGACCCCACCTACTTCGGGCCCATCCTGAACTTCCTCCGGCATGGCAAGCTGGTGCT  296

Query  276  GGACAAGGACATGGCTGAGGAGGGGGTCCTGGAGGAAGCCGAGTTCTACAACATCGGCCCGCTGATCCGCATCA  349
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GGACAAGGACATGGCTGAGGAGGGGGTCCTGGAGGAAGCCGAGTTCTACAACATCGGCCCGCTGATCCGCATCA  370

Query  350  TCAAAGACCGGATGGAAGAGAAGGACTACACGGTCACCCAGGTCCCACCCAAGCACGTGTACCGCGTGCTGCAG  423
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TCAAAGACCGGATGGAAGAGAAGGACTACACGGTCACCCAGGTCCCACCCAAGCACGTGTACCGCGTGCTGCAG  444

Query  424  TGCCAGGAGGAGGAGCTCACGCAAATGGTCTCCACCATGTCTGATGGCTGGCGCTTCGAGCAGCTGGTGAACAT  497
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  TGCCAGGAGGAGGAGCTCACGCAAATGGTCTCCACCATGTCTGATGGCTGGCGCTTCGAGCAGCTGGTGAACAT  518

Query  498  CGGCTCCTCCTACAACTACGGCAGCGAGGACCAGGCAGAGTTCCTGTGTGTGGTGTCCAAGGAGCTCCACAGCA  571
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CGGCTCCTCCTACAACTACGGCAGCGAGGACCAGGCAGAGTTCCTGTGTGTGGTGTCCAAGGAGCTCCACAGCA  592

Query  572  CCCCAAACGGGCTGAGCTCAGAGTCCAGCCGCAAAACCAAGAGCA-----CGGAGGA-----------------  623
            |||||||||||||||||||||||||||||||||||||||||..||     |..||||                 
Sbjct  593  CCCCAAACGGGCTGAGCTCAGAGTCCAGCCGCAAAACCAAGCCCAGTCATCTCAGGATCCCGCTAACCTTTTCT  666

Query  624  -----------------------------GCAGCTGGAGG----------------------------------  634
                                         .|.||||||||                                  
Sbjct  667  CCCTCCCACCACTGCCTCCTCCTCCGCTTCCCGCTGGAGGTCCTGCCTCATCTTCATCCACCTCTTCTTCCTCC  740

Query  635  --------------------------------------------------------------------------  634
                                                                                      
Sbjct  741  TGGATCTCATCTGCACCCTGCCTCTTCCCTCTCTGCCCCTGTCCGGGTTTTCTCTCTGCCTGCTCACGCCTCCA  814

Query  635  ---------------------AG------------------CAG-------------------CAG--------  642
                                 ||                  |||                   |||        
Sbjct  815  TCCCGGGTCTGCCCTGGTCCCAGCCTCCCGTGCCCTCCACCCAGGCCCCCTGGCCCTGCATCCCAGAGCGTCCT  888

Query  643  -----------------------------------------CAGCAGGAGGAGGAGGTGGAGGAGGTGGA----  671
                                                     ||||..|.|||||||| ||.|.||.||.|    
Sbjct  889  GCCTGCCGCCTCCTGCGCCCCTTCTGGTACCTCCTGCCTCCCAGCCTGGGGAGGAGG-GGCGCAGCTGCACCTC  961

Query  672  ----------------------GG-------TGGAACAGG--------TGCAGG--------------------  688
                                  ||       ||..||.||        ||||||                    
Sbjct  962  CTCTGTGCCCACTAACCCTGCCGGGCACCTCTGAGACTGGGCCCTGGCTGCAGGCCCTGCCCCCCCTCCTCTCC  1035

Query  689  ----------------------------TGGAGGCAGATGCACAGGAGAAAGGTGCAGCCAACCC------ACA  728
                                        |    ||||.|.|.|         || |.||  ||||      ||.
Sbjct 1036  TCCCGGCCTCCTCCTCACGTTTCCTCCTT----GCAGGTTCCC---------GT-CCGC--ACCCTCTCAGACC  1093

Query  729  GGAGGATGA--TTGC--  741
            .||||.|||  ||||  
Sbjct 1094  TGAGGCTGAGCTTGCAG  1110