Nucleotide Global Alignment
Description
- Query:
- TRCN0000472221
- Subject:
- XR_001781569.1
- Aligned Length:
- 2029
- Identities:
- 657
- Gaps:
- 1288
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCTCCAGACTACAGCTCCCGGCATGCCCTGCACCTGGTACTCGCCCGCGGCGTGCGGAGGGAAGGATGCAGACA 74
Query 1 ------------ATGAGGATGGAGGCCGGGGAGGCAGCGCCGCCGGCGGGGGCGGGCGGCCGCGCCACAGGCGG 62
|||||||||||||||||||||||||||||.||||.||||||||||||||||.||...|||||
Sbjct 75 ACGCGGCCGGCGATGAGGATGGAGGCCGGGGAGGCAGCGCCACCGGTGGGGGCGGGCGGCCGCCCCGGGGGCGG 148
Query 63 CTGGGGCAAGTGGGTGCGGCTCAACGTGGGGGGCACGGTGTTCCTGACCACCCGGCAGACGCTGTGCCGCGAGC 136
|||||||||||||||||||||.||||||||||||||||||||||||||||||||.|||||||||||.||.||||
Sbjct 149 CTGGGGCAAGTGGGTGCGGCTGAACGTGGGGGGCACGGTGTTCCTGACCACCCGCCAGACGCTGTGTCGGGAGC 222
Query 137 AGAAGTCCTTCCTCAGCCGCCTGTGCCAGGGGGAAGAGCTGCAGTCGGACCGGGATGAGACCGGGGCCTACCTC 210
|||||||||||||||||||||||||.|||||.||||||||.||.||||||.|||||||||||||||||||||||
Sbjct 223 AGAAGTCCTTCCTCAGCCGCCTGTGTCAGGGCGAAGAGCTTCAATCGGACAGGGATGAGACCGGGGCCTACCTC 296
Query 211 ATTGACCGTGACCCCACCTACTTCGGGCCCATCCTGAACTTCCTCCGGCATGGCAAGCTGGTGCTGGACAAGGA 284
||||||||||||||||||||||||||||||||||||||.||||||.|||||||.||..||||||||||||||||
Sbjct 297 ATTGACCGTGACCCCACCTACTTCGGGCCCATCCTGAATTTCCTCAGGCATGGAAAATTGGTGCTGGACAAGGA 370
Query 285 CATGGCTGAGGAGGGGGTCCTGGAGGAAGCCGAGTTCTACAACATCGGCCCGCTGATCCGCATCATCAAAGACC 358
||||||.|||||||||||||||||||||||.||||||||||||||.||.||.|||||.||.||||||||||||.
Sbjct 371 CATGGCCGAGGAGGGGGTCCTGGAGGAAGCAGAGTTCTACAACATTGGTCCTCTGATTCGAATCATCAAAGACA 444
Query 359 GGATGGAAGAGAAGGACTACACGGTCACCCAGGTCCCACCCAAGCACGTGTACCGCGTGCTGCAGTGCCAGGAG 432
|||||||.|||||.||||||||.||..|||||||.|||||.|||||.||.|||||.||||||||||||||.|||
Sbjct 445 GGATGGAGGAGAAAGACTACACAGTGGCCCAGGTGCCACCTAAGCATGTATACCGAGTGCTGCAGTGCCAAGAG 518
Query 433 GAGGAGCTCACGCAAATGGTCTCCACCATGTCTGATGGCTGGCGCTTCGAGCAGCTGGTGAACATCGGCTCCTC 506
|||||||||||.||.|||||.|||||.|||||.||.||||||||||||||||||||||||||||||||||||||
Sbjct 519 GAGGAGCTCACACAGATGGTATCCACTATGTCCGACGGCTGGCGCTTCGAGCAGCTGGTGAACATCGGCTCCTC 592
Query 507 CTACAACTACGGCAGCGAGGACCAGGCAGAGTTCCTGTGTGTGGTGTCCAAGGAGCTCCACAGCACCCCAAACG 580
|||||||||.||.||.|||||||||||.||||||||||||||||||||.|||||||||||||||.|||||.|||
Sbjct 593 CTACAACTATGGGAGTGAGGACCAGGCCGAGTTCCTGTGTGTGGTGTCTAAGGAGCTCCACAGCTCCCCACACG 666
Query 581 GGCTGAGCTCAGAGTCCAGCCGCAAAACCAAG----------------------------------------AG 614
|.||||||||.|||||||..|||||..||||| |.
Sbjct 667 GCCTGAGCTCCGAGTCCACTCGCAAGGCCAAGCCCTGTCATCTCAGGATCCCGCTAACCTTTTCTCCCTCCCAC 740
Query 615 CAC--------------------------GGAGGAGCAG----------------------------CTGGA-- 632
||| |||||..|.| |||||
Sbjct 741 CACCGCCTCCTCCTCCTCCGCTTCCTGCTGGAGGTCCTGCTTCATCTTCATCCACCTCCTCTTCCTCCTGGATC 814
Query 633 ------------------------------------------------------------------------GG 634
||
Sbjct 815 TCATCTGCACCCTGCCTCTTCCCTCTCTGCCCCTGCCCAGGTTTCCTCTCCGCCTGCTCCCGTCTCCACCCTGG 888
Query 635 AGCAGC-------------------------------AGC--------------------AGCA---------- 647
.||.|| ||| ||||
Sbjct 889 GGCTGCCCTAGTCCCAGTCTCCCGCGCCCTCTCCCCAAGCCCCCTCGCCCTGCATCCCCAAGCATCCTGCCTGC 962
Query 648 -------------------------------------------GGAGGAGGAG-GTGG---------------- 661
||||||||.| ||||
Sbjct 963 CGCCTCCTTCGCCCCTTCCAGCCCCTCCTGCCTCCTGGCCTGGGGAGGAGGGGCGTGGCCGCATCTGCTCTTTG 1036
Query 662 -----------AG------------GAGG-TGGAGGTGG-AACAGG---------------------------- 682
|| |||| |||...||| .|||||
Sbjct 1037 TCCTCCAACCCAGCAGAGCACCTCTGAGGCTGGCCTTGGCCACAGGCCCCACTCTTCCCACTTGCCTCCTCACG 1110
Query 683 ---------TGCAGGTGGAGG------------CAGATGCA------------CAG-GAG-------------- 708
|||||||....| ||||..|| ||| |||
Sbjct 1111 TTTCCTCCTTGCAGGTCCCTGTCCGCACCCTCCCAGACCCAAGCCTGAGCTTGCAGTGAGAGCTCCTCGGCCCC 1184
Query 709 ------------AAAGGTGCAGC-----------CAACCCACAGG----AGGATGATTGC-------------- 741
|.||.|||.|| |||.|||.||| .|||||...||
Sbjct 1185 GCGCCCGCCCCCAGAGCTGCCGCCCCTGCTATTACAAGCCAGAGGCACCCGGATGTGAGCCCCCAGATCACCTC 1258
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1259 CAGGGACTTGGGGTTCCGATCTGAAATCCTTTATTTTTGTACCACGGGGTGGGCCCCTGGCCCGAGGAGGAAGA 1332
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1333 CAAGCCCTCTACCTTGTCAGTGCTGCCTGCATCTGCCGGGCTGAGACTCACTCCTGCCTTGGGGCCCAGGCCTG 1406
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1407 GGGCCCTCTGGGACCTTGGAAGGCCTGACATGGGTCCTGGGGTCTCCAGGCAGAGACGCCAAGGCCAAACTGTG 1480
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1481 GCACTACCTACCCATATCTTCCAGGCCCTTTTGTCCCCTCACCTGGGCGCCCTTGCTGCATGGCGGATACACTC 1554
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1555 CCTCCCAGTCCCATCATAGCACCTCTTAGAGCCTCAGTCTCTATGGCACCATAGGGTCATCCTCTCCTCCCACC 1628
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1629 TACCTCACAGGGTTGTTGTGAGAATCAGGGAGGATCATGGGGTTCCTGGGAGCCCTGAGTGTGTTGGGGCTACA 1702
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1703 ATCATTACCTTCTTAGGGGAAGGGCTCTAGCCCCGCCCCTGTATGGGACACTATGGCCTCAGATACTGGTGGGG 1776
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1777 GACAATGTGAGGACTTTGCCAGGCAGGAAGGAAGTTACAGGCTTAACAGCACCTTGGCCACCACTTCTCTGTGC 1850
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1851 CACCGTGTGTTTGGCAGCAGAGTACAGTGTCCAGGGACTTGGGATGGGGAAGGGGACAGGTGTAACGGGTTGAG 1924
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1925 CTGTCCCGCCCGTGTCTTGACCACCCCGGGATGGGCACATGTCTGTCAGTTGTGTCCCACCCGCCATGAAATAA 1998
Query 742 ------------------------------- 741
Sbjct 1999 AGCTGAACAAACAGGCTTGGCCTGGCTGCCA 2029
