Nucleotide Global Alignment

Description

Query:
TRCN0000472489
Subject:
XR_001782405.1
Aligned Length:
3304
Identities:
2260
Gaps:
810

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CACATTACCCACGAGGCACCGCGAACGGATTCGCACTGTGTTTCCCAGAGTTCCCCGCGTCTGTCGCCAACGTT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GAAGACGTCGAAGCCAAGATGGCGACCGGGACAGGCAAGCACAAGCTGCTGAGTACTGGCCCAACAGAGCCATG  148

Query    1  -------------------------------------ATGAGAAGTGGCGATCAAAATTGGGTATCAGTTAGCA  37
                                                 |||||.|||||.|||||.||.||||||||||||||||
Sbjct  149  GTCCATCCGAGAGAAGTTGTGTTTAGCATCTTCTGTCATGAGGAGTGGGGATCAGAACTGGGTATCAGTTAGCA  222

Query   38  GAGCAATCAAGCCCTTTGCAGAACCTGGCCGCCCTCCAGACTGGTTCTCTCAAAAACATTGTGCTTCCCAGTAC  111
            |||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||.|||||.
Sbjct  223  GAGCAATCAAGCCCTTTGCAGAACCTGGCCGGCCTCCAGACTGGTTCTCTCAAAAACATTGTGCTTCTCAGTAT  296

Query  112  TCGGAGCTTTTAGAGACCACTGAGACACCAAAACGGAAACGAGGTGAAAAGGGAGAAGTGGTGGAAACTGTTGA  185
            ||.|||||.||||||||.||||||||.||||||||||||||.||||||||.|||||||||||.|||||||||||
Sbjct  297  TCTGAGCTCTTAGAGACTACTGAGACTCCAAAACGGAAACGGGGTGAAAAAGGAGAAGTGGTAGAAACTGTTGA  370

Query  186  AGATGTTATTGTTCGGAAATTGACTGCTGAGCGAGTTGAAGAACTAAAGAAAGTGATAAAGGAAACCCAGGAGA  259
            |||||||||||||||.|||.|||||||||||.|||||||||||||.||||||||.||||||||.||.|||||||
Sbjct  371  AGATGTTATTGTTCGCAAACTGACTGCTGAGAGAGTTGAAGAACTGAAGAAAGTCATAAAGGAGACACAGGAGA  444

Query  260  GATATAGACGGCTAAAGAGAGATGCAGAACTAATTCAAGCTGGACACATGGACAGCAGACTGGATGAGCTTTGC  333
            ||||.||.||.||.||.|||||||||||||||||.|||||.||.||||||||||||||||||||||||||.|||
Sbjct  445  GATACAGGCGTCTGAAAAGAGATGCAGAACTAATCCAAGCCGGGCACATGGACAGCAGACTGGATGAGCTCTGC  518

Query  334  AATGACATTGCAACGAAAAAGAAATTGGAAGAAGAGGAGGCTGAAGTAAAGAGGAAGGCTACAGATGCTGCATA  407
            |||||||||||||.||||||||||||||||||.||.||||||||||||||.||||||||.||.||||||||.||
Sbjct  519  AATGACATTGCAATGAAAAAGAAATTGGAAGAGGAAGAGGCTGAAGTAAAAAGGAAGGCCACCGATGCTGCGTA  592

Query  408  CCAGGCTCGTCAAGCAGTAAAAACACCCCCCCGGAGGTTACCCACTGTGATGGTTCGCTCTCCTATAGATTCTG  481
            ||||||.||.||||||||.|||||.||.||.||.||||||||.|||||||||||.|||||||||.||||.||||
Sbjct  593  CCAGGCGCGACAAGCAGTGAAAACGCCTCCTCGAAGGTTACCGACTGTGATGGTCCGCTCTCCTGTAGACTCTG  666

Query  482  CCTCCCCAGGAGGTGATTATCCACTTGGGGACTTGACTCCAACCACTATGGAAGAGGCTACCTCTGGGGTAACC  555
            |||||||||||||||||||.||||||||.||||||||||||||||||||||||||||||||||||||       
Sbjct  667  CCTCCCCAGGAGGTGATTACCCACTTGGAGACTTGACTCCAACCACTATGGAAGAGGCTACCTCTGG-------  733

Query  556  CCCGGGACTTTGCCGAGTACCCCAGTCACCTCGTTTCCTGGGATTCCTGACACCCTTCCTCCAGGCTCTGCACC  629
                                                                                      
Sbjct  734  --------------------------------------------------------------------------  733

Query  630  CTTAGAAGCCCCCATGACCCCAGTAACAGATGATTCACCCCAGAAAAAGATGCTTGGACAGAAAGCAACTCCAC  703
                                                                                      
Sbjct  734  --------------------------------------------------------------------------  733

Query  704  CCCCCTCCCCTCTGCTGTCAGAGCTCTTGAAGAAGGGCAGCCTCCTGCCTACTAGCCCCAGACTGGTCAATGAG  777
                                                                            |||.||||||
Sbjct  734  ----------------------------------------------------------------GGTGAATGAG  743

Query  778  AGTGAAATGGCTGTGGCTTCTGGCCACCTGAACAGTACAGGTGTCCTCCTGGAGGTAGGCGGGGTCCTTCCCAT  851
            |||||||||.||||..|..|||||||.||||||||.|||||.||.|||.||||||||||.|||||.||||||||
Sbjct  744  AGTGAAATGCCTGTACCCCCTGGCCATCTGAACAGCACAGGGGTTCTCTTGGAGGTAGGAGGGGTTCTTCCCAT  817

Query  852  GATACATGGTGGGGAGATACAGCAAACACCCAATACTGTTGCAGCCTCCCCTGCTGCATCAGGTGCTCCCACTC  925
            |||||||||||||||||||||||.||||.|||.|.||||.||.||||||||.|||||.||||||||||||||||
Sbjct  818  GATACATGGTGGGGAGATACAGCCAACAACCAGTGCTGTGGCGGCCTCCCCGGCTGCCTCAGGTGCTCCCACTC  891

Query  926  TTTCCCGGCTTTTAGAAGCTGGTCCTACACAGTTCACCACACCTCTTGCTTCCTTCACTACTGTTGCCAGTGAG  999
            ||||||||||||||||||||||.||.||||||||||||||.||||||.||||||||||||||||||||||||||
Sbjct  892  TTTCCCGGCTTTTAGAAGCTGGGCCCACACAGTTCACCACTCCTCTTCCTTCCTTCACTACTGTTGCCAGTGAG  965

Query 1000  CCTCCAGTTAAACTTGTGCCACCCCCTGTAGAGTCTGTGTCCCAAGCTACCATTGTCATGATGCCTGCGCTGCC  1073
            ||.||||||||.||||||||||||||||||||||||||||||||.||||||||||||||||||||.||||||||
Sbjct  966  CCGCCAGTTAAGCTTGTGCCACCCCCTGTAGAGTCTGTGTCCCAGGCTACCATTGTCATGATGCCCGCGCTGCC  1039

Query 1074  AGCACCATCCTCTGCTCCGGCTGTCTCCACTACTGAAAGTGTAGCTCCAGTGAGTCAACCCGACAACTGTGTTC  1147
            ||||||||||||||||.||||||||||||||.|||||||||.||||||||||||.||.||.||...||||||.|
Sbjct 1040  AGCACCATCCTCTGCTGCGGCTGTCTCCACTTCTGAAAGTGGAGCTCCAGTGAGCCAGCCTGAGCCCTGTGTAC  1113

Query 1148  CCATGGAGGCTGTGGGGGATCCACATACTGTGACTGTTTCCATGGACAGCAGTGAAATATCCATGATCATCAAT  1221
            ||.||||.||||||||||||||||||||||||||||||||||||||.||||.||||||.|||||||||||.|||
Sbjct 1114  CCCTGGAAGCTGTGGGGGATCCACATACTGTGACTGTTTCCATGGATAGCAATGAAATCTCCATGATCATTAAT  1187

Query 1222  TCTATCAAAGAAGAGTGTTTTCGATCAGGGGTAGCAGAGGCTCCTGTTGGATCAAAGGCTCCCAGCATAGATGG  1295
            ||.|||||||||||||||||.||.||||||||||||||||||||||.|||||||||||||||.|||||||||||
Sbjct 1188  TCCATCAAAGAAGAGTGTTTCCGCTCAGGGGTAGCAGAGGCTCCTGGTGGATCAAAGGCTCCAAGCATAGATGG  1261

Query 1296  GAAGGAAGAATTAGATCTGGCTGAGAAGATGGATATTGCTGTGTCTTACACAGGTGAAGAGCTGGATTTTGAGA  1369
            |||||||||.||.|||||.||.|||||||||||||||||||||||||||||||||||||||.||||.|||||.|
Sbjct 1262  GAAGGAAGACTTGGATCTAGCGGAGAAGATGGATATTGCTGTGTCTTACACAGGTGAAGAGTTGGACTTTGAAA  1335

Query 1370  CTGTTGGAGACATCATTGCCATCATTGAGGACAAGGTAGATGATCATCCTGAAGTGCTGGATGTGGCAGCAGTG  1443
            |.|||||||||||||||||||||||||||||||||||.||||||||.|||||||||||||||||||||||.||.
Sbjct 1336  CAGTTGGAGACATCATTGCCATCATTGAGGACAAGGTGGATGATCACCCTGAAGTGCTGGATGTGGCAGCGGTA  1409

Query 1444  GAAGCAGCACTGTCATTTTGTGAAGAAAATGATGATCCTCAGTCCCTGCCTGGCCCCTGGGAGCATCCTATCCA  1517
            |||||.||..|.||.||.||||||||.||||||||.|||||||||||||||||||||||||||||.||||||||
Sbjct 1410  GAAGCGGCGTTATCGTTCTGTGAAGAGAATGATGACCCTCAGTCCCTGCCTGGCCCCTGGGAGCACCCTATCCA  1483

Query 1518  GCAGGAGCGGGACAAGCCAGTACCTCTCCCTGCACCAGAAATGACGGTCAAGCAAGAGAGACTGGACTTTGAGG  1591
            |||||||||.|||||||||||||||||.||.||||||||.|||||.|||||.||||||||.||.|||||.||||
Sbjct 1484  GCAGGAGCGCGACAAGCCAGTACCTCTGCCAGCACCAGAGATGACAGTCAAACAAGAGAGGCTAGACTTCGAGG  1557

Query 1592  AAACGGAAAACAAGGGAATACATGAACTGGTGGACATCAGGGAGCCCAGTGCAGAGATCAAGGTGGAACCTGCA  1665
            ||.|.||||||||.||..|.|||||.|||||||||||||||||..||.|||..|||||.|||||||||||..||
Sbjct 1558  AATCAGAAAACAAAGGGCTCCATGACCTGGTGGACATCAGGGATTCCGGTGTTGAGATTAAGGTGGAACCCACA  1631

Query 1666  GAACCAGAGCCAGTCATTTCAGGAGCCGAAATAGTAGCTGGAGTTGTTCCAGCCACAAGTATGGAGCCACCAGA  1739
            ||.||||||||||.|||.||.||.||.||.||||||||||||||||.|||||...|||||||||||||||||||
Sbjct 1632  GAGCCAGAGCCAGGCATGTCTGGGGCTGAGATAGTAGCTGGAGTTGGTCCAGTTCCAAGTATGGAGCCACCAGA  1705

Query 1740  ACTCAGGAGTCAGGACTTAGATGAGGAACTGGGAAGTACTGCAGCTGGAGAGATTGTTGAAGCAGATGTTGCCA  1813
            ||||||||||||.||||.||||||.||||...|||||.|||||||||||||.||||.|||.|||||||.|.|||
Sbjct 1706  ACTCAGGAGTCAAGACTCAGATGAAGAACCTAGAAGTTCTGCAGCTGGAGACATTGGTGAGGCAGATGGTTCCA  1779

Query 1814  TTGGGAAAGGCGATGAGACTCCACTTACAAATGTGAAGACAGAGGCATCCCCTGAAAGCATGTTGTCTCCATCA  1887
            .|||||||||||||||||..||||||.||..||||||||||||||||||||||||.||||||||||||||||||
Sbjct 1780  GTGGGAAAGGCGATGAGAGGCCACTTTCAGCTGTGAAGACAGAGGCATCCCCTGAGAGCATGTTGTCTCCATCA  1853

Query 1888  CATGGCTCAAATCCCATTGAAGATCCTTTAGAGGCAGAGACTCAGCACAAGTTTGAAATGTCAGACTCATTGAA  1961
            |||||||||||||..|||||||||||||||||||||||||||||.|||||||||||||||||            
Sbjct 1854  CATGGCTCAAATCTTATTGAAGATCCTTTAGAGGCAGAGACTCAACACAAGTTTGAAATGTC------------  1915

Query 1962  AGAAGAATCAGGGACTATTTTTGGAAGCCAGATAAAGGATGCCCCAGGTGAGGATGAGGAGGAAGATGGTGTCA  2035
                                               ||||||||||||||||.||||||||.||||||||.||||
Sbjct 1916  -----------------------------------AGGATGCCCCAGGTGACGATGAGGAAGAAGATGGAGTCA  1954

Query 2036  GTGAAGCGGCCAGCCTAGAGGAGCCTAAGGAAGAGGATCAAGGAGAAGGCTACTTGTCAGAAATGGATAATGAA  2109
            |||||||.||.|||||||||||||||||||||||||||||||||||||||||.|||||.||.|||||||||||.
Sbjct 1955  GTGAAGCAGCTAGCCTAGAGGAGCCTAAGGAAGAGGATCAAGGAGAAGGCTATTTGTCTGAGATGGATAATGAG  2028

Query 2110  CCTCCTGTGAGCGAGAGTGATGATGGCTTCAGCATACACAATGCTACACTGCAGTCACACACACTGGCAGACTC  2183
            ||.||||||||.|||||||||||||||||.||.|||||.||.||.|||||||||||||||||.|||||||||||
Sbjct 2029  CCCCCTGTGAGTGAGAGTGATGATGGCTTTAGTATACATAACGCCACACTGCAGTCACACACTCTGGCAGACTC  2102

Query 2184  CATCCCCAGCAGCCCTGCTTCTTCACAGTTCTCTGTCTGTAGTGAGGATCAGGAAGCTATTCAGGCACAGAAAA  2257
            ||||||.|||||||||||.||.||.|||||.||.||.||.|||||.|||||.|||||.||||||||.|||||||
Sbjct 2103  CATCCCAAGCAGCCCTGCCTCCTCCCAGTTTTCCGTGTGCAGTGAAGATCAAGAAGCAATTCAGGCTCAGAAAA  2176

Query 2258  TTTGGAAGAAAGCCATCATGCTTGTATGGAGAGCTGCAGCTAATCATAGGTATGCCAATGTCTTCCTGCAGCCT  2331
            |.|||||||||||||||||||||||||||||.||||||||.||||||||||||||||||||.||||||||.|||
Sbjct 2177  TATGGAAGAAAGCCATCATGCTTGTATGGAGGGCTGCAGCAAATCATAGGTATGCCAATGTGTTCCTGCAACCT  2250

Query 2332  GTTACAGATGACATAGCACCTGGCTACCACAGCATTGTGCAGAGGCCTATGGATTTGTCAACTATTAAGAAAAA  2405
            |||||||||||||||||.|||||.|||||.||||||||.||||||||||||||||||||||||||.||||||||
Sbjct 2251  GTTACAGATGACATAGCTCCTGGTTACCATAGCATTGTACAGAGGCCTATGGATTTGTCAACTATAAAGAAAAA  2324

Query 2406  CATAGAAAATGGACTGATCCGAAGCACAGCTGAATTTCAGCGTGACATTATGCTGATGTTTCAGAATGCTGTAA  2479
            |||.|||||||||||||||||||||||||||||.||||||||||||||.|||||||||||||||||||||||.|
Sbjct 2325  CATTGAAAATGGACTGATCCGAAGCACAGCTGAGTTTCAGCGTGACATCATGCTGATGTTTCAGAATGCTGTTA  2398

Query 2480  TGTACAATAGCTCAGACCATGATGTCTATCACATGGCAGTGGAGATGCAGCGAGATGTCTTGGAACAGATCCAG  2553
            ||||||||||||||||||||||||||||||||||||||||.|||||||||.|||||||||||||||||||||||
Sbjct 2399  TGTACAATAGCTCAGACCATGATGTCTATCACATGGCAGTAGAGATGCAGAGAGATGTCTTGGAACAGATCCAG  2472

Query 2554  CAATTCTTGGCCACGCAGTTGATTATGCAAACATCCGAGTCTGGGATCAGTGCTAAAAGTCTTCGAGGGAGAGA  2627
            ||||||||||||||.||||||||||||||||||||.||||||||.|||||||||||||||||.||.||||||||
Sbjct 2473  CAATTCTTGGCCACACAGTTGATTATGCAAACATCTGAGTCTGGAATCAGTGCTAAAAGTCTCCGGGGGAGAGA  2546

Query 2628  TTCTACCCGCAAACAGGATGCTTCAGAGAAGGACAGTGTCCCAATGGGCTCTCCTGCCTTCCTTCTCTCTCTCT  2701
            .||||||||.|||||.||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||
Sbjct 2547  CTCTACCCGAAAACAAGATGCTTCAGAGAAGGACAGTGTCCCCATGGGCTCTCCTGCCTTCCTTCTCTCTCTCT  2620

Query 2702  TTGATGGAGGAACCAGGGGACGCCGCTGTGCCATTGAAGCAGATATGAAGATGAAAAAG---------------  2760
            |||||||.|||||||||||||||||||||||||||||||||||||||||||||||.|||               
Sbjct 2621  TTGATGGGGGAACCAGGGGACGCCGCTGTGCCATTGAAGCAGATATGAAGATGAAGAAGTGAATGCCCTCTTTG  2694

Query 2761  --------------------------------------------------------------------------  2760
                                                                                      
Sbjct 2695  AGCTGAGCCTGAAATAGAAATAAGCAAGATACTTTAGCTTGGGCTTGTGGGCTCAGTTCCACACTTGATCTTAG  2768

Query 2761  --------------------------------------------------------------------------  2760
                                                                                      
Sbjct 2769  TCAAAAGGCTGAGAAGCAGGGAGTCCAGAAGTGGAATTACAGAAGAGGAGGTGCCTGGGCCAAATGACATGAGT  2842

Query 2761  --------------------------------------------------------------------------  2760
                                                                                      
Sbjct 2843  TGAGAAAATCTCTTTTCAGAGAGTTGGAGTAGCACAGATGCCTGTTTTAGGGCAGAAATCATGGGCTCTGTTAA  2916

Query 2761  --------------------------------------------------------------------------  2760
                                                                                      
Sbjct 2917  TGCCCTAATGTGTAACTAGCAGATTGTAGCTAATTTGTACTGTCTTGTGAAGTGTACAGATTTTTTAAATAATA  2990

Query 2761  ------------------------------------------------  2760
                                                            
Sbjct 2991  ATAATAATAAACCTGTGAAGTGTGTATATATAACAATCAGAAGGAAAA  3038

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