Nucleotide Global Alignment
Description
- Query:
- TRCN0000473040
- Subject:
- XM_006500784.3
- Aligned Length:
- 2548
- Identities:
- 1386
- Gaps:
- 1022
Alignment
Query 1 ---------------------------------------------ATGAAACGAGGTCGCCTTCCCAGCAGCAG 29
|||||||||||||||||||||||||||||
Sbjct 1 ATGGCTTCCTGTGACAGAGGCTGCCTGCTGTCTCCCGGGGAGATCATGAAACGAGGTCGCCTTCCCAGCAGCAG 74
Query 30 TGAGGATTCTGACGACAATGGCAGCCTGTCAACTACTTGGTCCCAGAATTCCCGATCCCAGCAT---AGGAGAA 100
|||||||||||||||||||||||||.|||||||.||.|||||||||.||||.|||||||||||| |||||.|
Sbjct 75 TGAGGATTCTGACGACAATGGCAGCTTGTCAACGACATGGTCCCAGCATTCTCGATCCCAGCATGGGAGGAGTA 148
Query 101 GCTCCTGCTCCAGACATGAAGATCGAAAGCCTTCAGAGGTGTTTAGGACAGACCTGATCACTGCCATGAAGTTG 174
|..|||||||.||||.||||||||||||||||||.||||||||||||||.||||||||||||||||||||||||
Sbjct 149 GTACCTGCTCTAGACCTGAAGATCGAAAGCCTTCTGAGGTGTTTAGGACCGACCTGATCACTGCCATGAAGTTG 222
Query 175 CATGACTCCTACCAGCTGAATCCGGATGAGTACTATGTGTTGGCAGATCCCTGGAGACAGGAATGGGAGAAAGG 248
||||||||||||||||||||.||||||||.|||||.|||.||||.|||||||||||||||||.|||||||||||
Sbjct 223 CATGACTCCTACCAGCTGAACCCGGATGACTACTACGTGCTGGCTGATCCCTGGAGACAGGAGTGGGAGAAAGG 296
Query 249 GGTCCAGGTGCCTGTGAGCCCGGGGACCATCCCTCAGCCTGTGGCCAGGGTTGTGTCTGAAGAGAAATCCCTCA 322
|||||||||||||||||||||.|||||||||||.||||||||||||||||||||||||||||||||.||.||||
Sbjct 297 GGTCCAGGTGCCTGTGAGCCCAGGGACCATCCCACAGCCTGTGGCCAGGGTTGTGTCTGAAGAGAAGTCTCTCA 370
Query 323 TGTTCATCAGGCCCAAGAAGTACATCGTGTCATCAGGCTCTGAGCCTCCCGAGTTGGGCTATGTGGACATCCGG 396
|||||||||||||||||||||||||||.|||.||.|||||||||||.||.|.|||.|||||.||.||.||||||
Sbjct 371 TGTTCATCAGGCCCAAGAAGTACATCGCGTCGTCCGGCTCTGAGCCCCCAGCGTTAGGCTACGTCGATATCCGG 444
Query 397 ACGCTGGCTGACAGCGTGTGTCGCTATGACCTCAATGACATGGATGCTGCATGGCTGGAACTGACCAATGAAGA 470
||.|||||.|||||.||||||||.||||||||||||||.|||||||||||.|||||||||.|.|||||||||||
Sbjct 445 ACTCTGGCAGACAGTGTGTGTCGGTATGACCTCAATGATATGGATGCTGCGTGGCTGGAAGTAACCAATGAAGA 518
Query 471 ATTTAAGGAGATGGGAATGCCTGAACTAGATGAATACACCATGGAGAGGGTCCTAGAGGAATTTGAGCAGCGAT 544
|||||||||||||||.|||||.||.||.||.||.|||||||||||.||||||.|.||||||||.||.|||||||
Sbjct 519 ATTTAAGGAGATGGGGATGCCGGAGCTGGACGAGTACACCATGGAAAGGGTCTTGGAGGAATTCGAACAGCGAT 592
Query 545 GCTACGACAATATGAATCATGCCATAGAGACTGAGGAAGGCCTGGGGATCGAATATGATGAAGATGTTGTCTGT 618
||||.||||||||||||||||||||||||||.||.||.|||.|||||||.|||||.||.|||||.||||||||.
Sbjct 593 GCTATGACAATATGAATCATGCCATAGAGACAGAAGAGGGCTTGGGGATTGAATACGACGAAGACGTTGTCTGC 666
Query 619 GATGTCTGCCAGTCTCCTGATGGTGAGGACGGCAATGAGATGGTGTTCTGTGACAAATGCAACATCTGTGTGCA 692
||||||||||||||.||||||||.|||||||||||.||||||||||||||||||||.||.||||||||||||||
Sbjct 667 GATGTCTGCCAGTCACCTGATGGCGAGGACGGCAACGAGATGGTGTTCTGTGACAAGTGTAACATCTGTGTGCA 740
Query 693 CCAGGCCTGTTATGGAATCCTCAAGGTACCAGAGGGCAGCTGGCTGTGCCGGACATGTGCCCTGGGGGTTCAGC 766
||||||.||.|||||.|||||||||||.|||||||||||.|||||.||.||.||||||||||||||.|||||||
Sbjct 741 CCAGGCTTGCTATGGGATCCTCAAGGTGCCAGAGGGCAGTTGGCTATGTCGTACATGTGCCCTGGGAGTTCAGC 814
Query 767 CAAAATGTCTGCTGTGTCCGAAGAAGGGTGGAGCTATGAAGCCCACCCGTAGCGGAACCAAGTGGGTCCACGTT 840
||||||||.||||||||||.|||||.||.||||||||||||||.|||||.|||||||||||||||||||||||.
Sbjct 815 CAAAATGTTTGCTGTGTCCCAAGAAAGGCGGAGCTATGAAGCCGACCCGCAGCGGAACCAAGTGGGTCCACGTC 888
Query 841 AGCTGTGCTCTGTGGATCCCTGAGGTGAGCATTGGCAGCCCAGAGAAGATGGAGCCCATCACCAAGGTGTCACA 914
||||||||.|||||||||||||||||.||||||||||||||.||||||||||||||||||||.||.|||||.||
Sbjct 889 AGCTGTGCCCTGTGGATCCCTGAGGTAAGCATTGGCAGCCCTGAGAAGATGGAGCCCATCACAAAAGTGTCTCA 962
Query 915 CATTCCCAGCAGCCGGTGGGCGCTAGTGTGCAGCCTCTGCAATGAGAAGTTTGGGGCCTCTATACAGTGCTCTG 988
||||||||||||||||||||||||.|||||||||||||||||||||||.||.||||||||.|||||||||||||
Sbjct 963 CATTCCCAGCAGCCGGTGGGCGCTTGTGTGCAGCCTCTGCAATGAGAAATTCGGGGCCTCCATACAGTGCTCTG 1036
Query 989 TGAAGAACTGCCGCACAGCCTTCCATGTGACCTGTGCTTTTGACCGGGGCCTGGAGATGAAGACCATCTTAGCA 1062
|||||||||||||.|||||||||||.|||||.||||||||||||||.||||||||||||||||||||.||.|||
Sbjct 1037 TGAAGAACTGCCGGACAGCCTTCCACGTGACTTGTGCTTTTGACCGTGGCCTGGAGATGAAGACCATATTGGCA 1110
Query 1063 GAGAATGATGAAGTCAAGTTCAAGTCCTATTGCCCAAAGCACAGCTCACATAGGAAACCCGAGGAGAGTCTTGG 1136
|||||||||||||||||.|||||||||||.||||||||||||||||||||.|||||||||||||||.|.||.||
Sbjct 1111 GAGAATGATGAAGTCAAATTCAAGTCCTACTGCCCAAAGCACAGCTCACACAGGAAACCCGAGGAGGGCCTGGG 1184
Query 1137 CAAGGGGGCTGCACAGGAGAATGGGGCCCCTGAGTGTTCCCCCCGGAATCCGCTGGAGCCCTTTGCCAGCCTTG 1210
..|.||.||.||.|||||||||||||||||||||.||||.||||.||..||.||||||||||.||..||.||.|
Sbjct 1185 TGAAGGAGCAGCCCAGGAGAATGGGGCCCCTGAGAGTTCTCCCCAGAGCCCTCTGGAGCCCTATGGTAGTCTGG 1258
Query 1211 AGCAGAACCGGGAGGAGGCCCACCGGGTGAGTGTCCGTAAGCAGAAGCTGCAGCAGTTGGAGGATGAGTTCTAC 1284
|||.|||.||.|||||||||||||||||||||||.||.|||||||||||.||||||.|||||||||||||||||
Sbjct 1259 AGCCGAATCGAGAGGAGGCCCACCGGGTGAGTGTTCGCAAGCAGAAGCTACAGCAGCTGGAGGATGAGTTCTAC 1332
Query 1285 ACCTTCGTCAACCTGCTGGATGTTGCCAGGGCTCTGCGGCTGCCTGAGGAAGTAGTGGATTTCCTGTACCAGTA 1358
|||||.|||||||||||||||||.||||||||.||||||||||||||||||||.||||||||||||||||||||
Sbjct 1333 ACCTTTGTCAACCTGCTGGATGTGGCCAGGGCGCTGCGGCTGCCTGAGGAAGTGGTGGATTTCCTGTACCAGTA 1406
Query 1359 CTGGAAGTTGAAGAGGAAGGTCAACTTCAACAAGCCCCTGATCACCCCAAAGAAAGATGAAGAGGACAATCTAG 1432
|||||||||||||||||||.|||||||||||||||||||.|||||||||||||||||.||||||||||||||||
Sbjct 1407 CTGGAAGTTGAAGAGGAAGATCAACTTCAACAAGCCCCTCATCACCCCAAAGAAAGACGAAGAGGACAATCTAG 1480
Query 1433 CCAAGCGGGAGCAGGATGTCTTATTTAGGAGGCTGCAGCTGTTCACGCACCTGCGGCAGGACCTGGAGAGGGT- 1505
||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 CCAAGCGGGAGCAGGATGTCTTGTTTAGGAGGCTGCAGCTGTTCACGCACCTGCGGCAGGACCTGGAGAGGGTT 1554
Query 1506 ---AA--TGATTGACA--CTGACACC------------TTA--------------------------------- 1527
|| |.|.|.||| .|||| || |||
Sbjct 1555 CGGAACCTCACTTACATGGTGAC-CCGCAGGGAAAAGATTAAACGGTCTGTGTGCAAAGTCCAGGAACAAATTT 1627
Query 1528 -------------------------------------------------------------------------- 1527
Sbjct 1628 TCACTCAGTACACTAAGCTCTTGGAGCAAGAAAAAGTTTCAGGTGTGCCTTCTTCCTGCTCCTCCGCACTGGAG 1701
Query 1528 -------------------------------------------------------------------------- 1527
Sbjct 1702 AACATGCTTTTTTTCAACAGTCCTTCTGTGGGCCCCAATGCTCCCAAGATAGAGGACTTGAAATGGCATTCTGC 1775
Query 1528 -------------------------------------------------------------------------- 1527
Sbjct 1776 ATTCTTCAGGAAACAAATGGGCACTTCCTTGGTTCATCCACTGAAAAAGTCCCATAAACGAGATGCAGTGCAGA 1849
Query 1528 -------------------------------------------------------------------------- 1527
Sbjct 1850 ATAGTTCTGGGACCGAGGGCAAGACCTCGCATAAGCAGCCAGGTCTTTGTGGTAGAAGGGAGGGGCTGGAGGTC 1923
Query 1528 -------------------------------------------------------------------------- 1527
Sbjct 1924 TCAGAAAGCTTGCTGAGCTTAGAAAAGACTTTTGCAGAAGCACGTCTCCTATCATCAGCACAACAGAAAAATGG 1997
Query 1528 -------------------------------------------------------------------------- 1527
Sbjct 1998 TGTGGTGACCCCAGACCATGGGAAAAGAAGAGACAATCGTTTTCATTGTGATCTCGTTAAAGGAGACTTAAAGG 2071
Query 1528 -------------------------------------------------------------------------- 1527
Sbjct 2072 ACAAATCTTTTAAGCAGAGTCACAAGCCTCTCAGGTCCACAGACACATCCCAGAGGCATCTGGACAACACAAGA 2145
Query 1528 -------------------------------------------------------------------------- 1527
Sbjct 2146 GCTGCCACCTCCCCTGGAGTAGGGCAGTCAGCACCTGGCACCAGGAAGGAGATTGTGCCCAAGTGCAATGGCTC 2219
Query 1528 -------------------------------------------------------------------------- 1527
Sbjct 2220 CCTAGTCAAAGTGCCTATAACACCTGCCAGCCCAGTGAAAAGCTGGGGAGGATTCCGGATTCCAAAGAAGGGGG 2293
Query 1528 -------------------------------------------------------------------------- 1527
Sbjct 2294 AGCGGCAGCAGCAAGGAGAAGCCCATGATGGGGCCTGCCACCAGCACTCAGACTGCTCCCATCTGGGTGTAAGC 2367
Query 1528 -------------------------------------------------------------------------- 1527
Sbjct 2368 CGAGCTCCAGCCAAGGAGAGAGCGAAGAGCAGGTTAAGAGCTGACAGTGAGAATGATGGGTACGCCCCTGATGG 2441
Query 1528 -------------------------------------------------------------------------- 1527
Sbjct 2442 GGAAATGAGTGACTCAGAGAGCGAGGCATCAGAGAAGAAATGTATCCATGCCAGCAGCACCATCAGCAGGAGGA 2515
Query 1528 -------------------------------- 1527
Sbjct 2516 CAGATATCATCAGGCGAAGCATCTTGGCCTCT 2547
