Nucleotide Global Alignment

Description

• Query: TRCN0000473109
• Subject: XM_006515055.2
• Aligned Length: 1056
• Identities: 785
• Gaps: 159

Alignment

Query    1  ATGAACATACACAGGTCTACCCCCATCACAATAGCGAGATATGGGAGATCGCGGAACAAAACCCAGGATTTCGA  74
                                          ||     ||.|.|||                 ||.||       
Sbjct    1  ------------------------------AT-----GACAGGGG-----------------CCGGG-------  15

Query   75  AGAGTTGTCGTCTATAAGGTCCGCGGAGCCCAGCCAGAGTTTCAGCCCGAACCTCGGCTCCCCGAGCCCGCCCG  148
             |.||.|  ||     |||   ||||.|||               ..||||            |||   |.|.|
Sbjct   16  -GCGTGG--GT-----AGG---GCGGGGCC---------------GGCGAA------------GAG---GGCGG  48

Query  149  AGACTCCG----AACTTGTCGCATTGCGTTTC-TTGTATCGGGAAATACTTATTGTTGGAACCTCTGGAGGGAG  217
            .|.|||.|    ||..|||||      ||..| |||.||.||||              ||.|     |||.|.|
Sbjct   49  GGGCTCTGTGGAAATGTGTCG------GTGACATTGAATGGGGA--------------GACC-----GAGCGCG  97

Query  218  ACCACGTTTTTCGTGCCGTGCATCTGCACA-----GCGGAGA-GGAGCTGGTGT----------------GCAA  269
            |.||.|     ||.|.||.||  ..|||||     |||.|.| ..|||.||..|                ||.|
Sbjct   98  AGCAAG-----CGAGGCGCGC--GCGCACACATACGCGCACACACAGCCGGGCTCGCTCCGAGATCCCCGGCCA  164

Query  270  GGTGTTTGATATCAGCTGCTACCAGGAATCCCTGGCACCGTGCTTTTGCCTGTCTGCTCATAGTAACATCAACC  343
            .||||||||.|||||||||||||||||.||||||||.||.|||||.|||||||||||.|||||.||||||||||
Sbjct  165  CGTGTTTGAGATCAGCTGCTACCAGGAGTCCCTGGCCCCCTGCTTCTGCCTGTCTGCCCATAGCAACATCAACC  238

Query  344  AAATCACTGAAATTATCCTGGGTGAGACCAAAGCCTATGTGTTCTTTGAGCGAAGCTATGGGGACATGCATTCC  417
            |||||||.|||||..|||||||.||||||||||||||||||||||||||||||||||||||.||||||||||||
Sbjct  239  AAATCACGGAAATCCTCCTGGGAGAGACCAAAGCCTATGTGTTCTTTGAGCGAAGCTATGGAGACATGCATTCC  312

Query  418  TTCGTCCGCACCTGCAAGAAGCTGAGAGAGGAGGAGGCAGCCAGACTGTTCTACCAGATTGCCTCGGCAGTGGC  491
            ||.||||||||.||.|||||||||||.|||||||||||||||.||||||||||||||||||||||.||.|||||
Sbjct  313  TTTGTCCGCACTTGTAAGAAGCTGAGGGAGGAGGAGGCAGCCCGACTGTTCTACCAGATTGCCTCAGCTGTGGC  386

Query  492  CCACTGCCATGACGGGGGGCTGGTGCTGCGGGACCTCAAGCTGCGGAAATTCATCTTTAAGGACGAAGAGAGGA  565
            |||.|||||.||.||.||.|||||||||||.||||||||||||||||||||.|||||.|||||.||||||||||
Sbjct  387  CCATTGCCACGATGGAGGCCTGGTGCTGCGTGACCTCAAGCTGCGGAAATTTATCTTCAAGGATGAAGAGAGGA  460

Query  566  CTCGGGTCAAGCTGGAAAGCCTGGAAGACGCCTACATTCTGCGGGGAGATGATGATTCCCTCTCCGACAAGCAT  639
            ||||.|||||||||||.||..||||||||||.||||||||.|||||.||||||||.||.|||||.|||||||||
Sbjct  461  CTCGTGTCAAGCTGGAGAGTTTGGAAGACGCTTACATTCTCCGGGGTGATGATGACTCACTCTCTGACAAGCAT  534

Query  640  GGCTGCCCGGCTTACGTAAGCCCAGAGATCTTGAACACCAGTGGCAGCTACTCGGGCAAAGCAGCCGACGTGTG  713
            ||||||||.||.||.||.|||||||||||||||||||||||.|||||.||.||||||||.|||||.||||||||
Sbjct  535  GGCTGCCCAGCGTATGTCAGCCCAGAGATCTTGAACACCAGCGGCAGTTATTCGGGCAAGGCAGCGGACGTGTG  608

Query  714  GAGCCTGGGGGTGATGCTGTACACCATGTTGGTGGGGCGGTACCCTTTCCATGACATTGAACCCAGCTCCCTCT  787
            ||||||||||||.||||||||||||||||||||||||||.||||||||||||||||||||.||.||.||.||.|
Sbjct  609  GAGCCTGGGGGTAATGCTGTACACCATGTTGGTGGGGCGTTACCCTTTCCATGACATTGAGCCTAGTTCTCTTT  682

Query  788  TCAGCAAGATCCGGCGTGGCCAGTTCAACATTCCAGAGACTCTGTCGCCCAAGGCCAAGTGCCTCATCCGAAGC  861
            ||||.||||||||..|.||||||||||||||||||||.||||||||.|||||||||||||||||||||||||||
Sbjct  683  TCAGTAAGATCCGCAGGGGCCAGTTCAACATTCCAGAAACTCTGTCTCCCAAGGCCAAGTGCCTCATCCGAAGC  756

Query  862  ATTCTGCGTCGGGAGCCCTCAGAGCGGCTGACCTCGCAGGAAATTCTGGACCATCCTTGGTTTTCTACAGATTT  935
            ||.|||||.||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  757  ATCCTGCGACGGGAGCCGTCAGAGCGGCTGACCTCGCAGGAAATTCTGGACCATCCTTGGTTTTCTACAGATTT  830

Query  936  TAGCGTCTCGAATTCAGCATATGGTGCTAAGGAAGTGTCTGACCAGCTGGTGCCGGACGTCAACATGGAAGAGA  1009
            |||.|||||.|||||.|.||.|||||||||.||.|.||.|||||||||||||||.||||||||||||||.||||
Sbjct  831  TAGTGTCTCAAATTCGGGATTTGGTGCTAAAGAGGCGTGTGACCAGCTGGTGCCAGACGTCAACATGGAGGAGA  904

Query 1010  ACTTGGACCCTTTCTTTAAC  1029
            ||||||||||||||||||||
Sbjct  905  ACTTGGACCCTTTCTTTAAC  924