Nucleotide Global Alignment

Description

Query:
TRCN0000473121
Subject:
XM_006713754.4
Aligned Length:
3006
Identities:
388
Gaps:
2610

Alignment

Query    1  ATGGATACTGAACCAAACCCGGGAACATCTTCTGTGTCAACAACAACCAGCAGTACCACCACCACCACCATCAC  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGATACTGAACCAAACCCGGGAACATCTTCTGTGTCAACAACAACCAGCAGTACCACCACCACCACCATCAC  74

Query   75  CACTTCCTCCTCTCGAATGCAGCAGCCACAGATCTCTGTCTACAGTGGTTCAGACCGACATGCTGT--------  140
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        
Sbjct   75  CACTTCCTCCTCTCGAATGCAGCAGCCACAGATCTCTGTCTACAGTGGTTCAGACCGACATGCTGTACAGGTAA  148

Query  141  ----ACAGGCATTGCATCGGCCCCCCAGCTCAGCTGCTCAGTACCTTCAGCAAATGTATGCAGCCCAACAACAG  210
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TTCAACAGGCATTGCATCGGCCCCCCAGCTCAGCTGCTCAGTACCTTCAGCAAATGTATGCAGCCCAACAACAG  222

Query  211  CACTTGATGCTGCATACTGCAGCTCTTCAGCAGCAGCATTTAAGCAGCTCCCAGCTTCAGAGCCTTGCTGCTGT  284
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CACTTGATGCTGCATACTGCAGCTCTTCAGCAGCAGCATTTAAGCAGCTCCCAGCTTCAGAGCCTTGCTGCTGT  296

Query  285  TCAGGCAAGTTTGTCCAGTGGAAGACCATCTACATCTCCCACAGGAAGTGTCACACAGCAGTCAAGTATGTCCC  358
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TCAGGCAAGTTTGTCCAGTGGAAGACCATCTACATCTCCCACAGGAAGTGTCACACAGCAGTCAAGTATGTCCC  370

Query  359  AAACGTCTGT-AAGTTC---------CCTAAATTTTTTTTTCCTG--GATTTAAAA----TTT-----------  405
            ||||||||.| ||..||         ||||.|         ||||  .|.||||.|    .||           
Sbjct  371  AAACGTCTATCAACCTCTCCACTTCTCCTACA---------CCTGCACAGTTAATAAGCCGTTCCCAGGCTTCC  435

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct  436  AGTTCTACCAGCGGCAGTATTACCCAACAGACTATGTTACTAGGGAGTACTTCCCCTACCCTAACGGCAAGCCA  509

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct  510  AGCTCAAATGTATCTCCGAGCTCAAATGCTGATTTTCACACCCGCTACCACTGTGGCTGCTGTACAGTCTGACA  583

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct  584  TTCCTGTTGTCTCGTCGTCATCGTCATCTTCCTGTCAGTCTGCAGCTACTCAGGTTCAGAATTTAACATTACGC  657

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct  658  AGCCAGAAGTTGGGTGTATTATCTAGCTCACAGAATGGTCCACCAAAAAGCACTAGTCAAACTCAGTCATTGAC  731

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct  732  AATTTGTCATAACAAAACAACAGTGACCAGTTCTAAAATCAGCCAACGAGATCCTTCTCCAGAAAGTAATAAGA  805

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct  806  AAGGAGAGAGCCCAAGCCTGGAATCACGAAGCACAGCTGTCACCCGGACATCAAGTATTCACCAGTTAATAGCA  879

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct  880  CCAGCTTCATATTCTCCAATTCAGCCTCATTCTCTAATAAAACATCAGCAGATTCCTCTTCATTCACCACCTTC  953

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct  954  CAAAGTTTCCCATCATCAGCTGATATTACAACAGCAGCAACAGCAAATTCAGCCAATCACACTTCAGAATTCAA  1027

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1028  CTCAAGACCCACCCCCATCCCAGCACTGTATACCACTCCAGAACCATGGCCTTCCTCCAGCTCCCAGTAATGCC  1101

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1102  CAGTCACAGCATTGTTCACCGATTCAGAGTCATCCCTCTCCTTTAACAGTGTCTCCTAATCAGTCACAGTCAGC  1175

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1176  ACAGCAGTCTGTAGTGGTGTCTCCTCCACCACCTCATTCACCAAGTCAGTCTCCTACTATAATTATTCATCCAC  1249

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1250  AAGCACTTATTCAGCCACACCCTCTTGTGTCATCAGCTCTCCAGCCAGGGCCAAATTTGCAGCAGTCCACTGCT  1323

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1324  AATCAGGTGCAAGCTACAGCACAGTTGAATCTTCCATCCCATCTTCCACTTCCAGCTTCCCCTGTTGTACACAT  1397

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1398  TGGCCCAGTTCAGCAGTCTGCCTTGGTATCCCCAGGCCAGCAGATTGTCTCTCCATCACACCAGCAATATTCAT  1471

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1472  CCCTGCAGTCCTCTCCAATCCCAATTGCAAGTCCTCCACAGATGTCGACATCTCCTCCAGCTCAGATTCCACCA  1545

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1546  CTGCCCTTGCAGTCTATGCAGTCTTTACAAGTGCAGCCTGAAATTCTGTCCCAGGGCCAGGTTTTGGTGCAGAA  1619

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1620  TGCTTTGGTGTCAGAAGAGGAACTTCCAGCTGCAGAAGCTTTGGTCCAGTTGCCATTTCAGACTCTTCCTCCTC  1693

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1694  CACAGACTGTTGCGGTAAACCTACAAGTGCAACCACCAGCACCTGTTGATCCACCAGTGGGAATGCATTTGAAC  1767

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1768  CAGTGTCATCTGCACAAAGTTTTTTCTCTTAAGGTTTATCAGGTAGAAGATGTGTGTGAAGAAGAAATGCCAGA  1841

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1842  AGAGTCAGATGAATGTGTCCGGATGGATAGAACCCCACCACCACCCACTTTGTCTCCAGCAGCTATAACAGTGG  1915

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1916  GGAGAGGAGAAGATTTGACTTCTGAACATCCTTTGTTAGAGCAAGTGGAATTACCTGCTGTGGCATCAGTCAGT  1989

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1990  GCTTCAGTAATTAAATCTCCATCAGATCCCTCACATGTTTCTGTTCCACCACCTCCATTGTTACTTCCAGCTGC  2063

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2064  CACCACAAGGAGTAACAGTACATCTATGCACAGTAGCATTCCCAGTATAGAGAACAAACCTCCACAGGCTATTG  2137

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2138  TTAAACCACAGATCCTAACCCATGTTATTGAAGGCTTTGTGATTCAGGAGGGATTGGAGCCATTTCCTGTGAGT  2211

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2212  CGTTCCTCTTTGCTAATAGAACAGCCTGTGAAAAAACGGCCTCTTTTGGATAATCAGGTGATAAATTCAGTGTG  2285

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2286  TGTTCAGCCAGAGCTACAGAATAATACAAAACATGCGGATAATTCATCTGACACAGAGATGGAAGACATGATTG  2359

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2360  CTGAAGAGACATTAGAAGAAATGGACAGTGAGTTGCTCAAGTGTGAATTCTGTGGGAAAATGGGATATGCTAAT  2433

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2434  GAATTTTTGCGGTCAAAACGATTCTGCACTATGTCATGTGCCAAAAGGTACAATGTTAGCTGTTCTAAAAAATT  2507

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2508  TGCACTTAGTCGTTGGAATCGTAAGCCTGATAATCAAAGTCTTGGGCATCGTGGCCGTCGTCCAAGTGGCCCTG  2581

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2582  ATGGGGCAGCGAGAGAACATATCCTTAGGCAGCTTCCAATTACTTATCCATCTGCAGAAGAAGACTTGGCTTCT  2655

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2656  CATGAAGATTCTGTGCCATCTGCTATGACAACTCGTCTGCGCAGGCAGAGCGAGCGGGAAAGAGAACGTGAGCT  2729

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2730  TCGGGATGTGAGAATTCGGAAAATGCCTGAGAACAGTGACTTGCTACCAGTTGCACAAACAGAGCCATCTATAT  2803

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2804  GGACAGTTGATGATGTCTGGGCCTTCATCCATTCTTTGCCTGGCTGCCAGGATATCGCAGATGAATTCAGAGCA  2877

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2878  CAGGAGATTGATGGACAGGCCCTTCTCTTGCTGAAAGAAGACCATCTCATGAGTGCAATGAATATCAAGCTAGG  2951

Query  406  ----------------------------------------------  405
                                                          
Sbjct 2952  CCCAGCCCTGAAGATCTGTGCACGCATCAACTCTCTGAAGGAATCT  2997

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