Nucleotide Global Alignment
Description
- Query:
- TRCN0000473708
- Subject:
- NR_003654.2
- Aligned Length:
- 3956
- Identities:
- 161
- Gaps:
- 3775
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TCCGGTGCTCAGTGGCTAGCCGAATAGCCGTGTTTGGGACCTGGGCTCGGGCTTCTTGCGTCCCCGCTAAGAAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ATGTCACGGGGCCGAATCGTCCGTATTCTCTCAGCTTCAAGCTCCTCTACTTTTCAACCAGGTCACTAGCCCTT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GACTCCTCTTATCAAACTTCCGGAACTGCCACCCCACCAGTGACTCCACAGGCACCAGGGCATGCAACAGGGCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGGACAGGAAGGCTCTCTTCTTCACCTCAAGCCTGCTGGGCTAACACTTGCGATTTTTACTAGAGTTAACTTTG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TAATGTATGTCTCTGACTCTAGAATTTCAAGAGAAGTTCCACTTAGTGACTCCTAAGTGGAAGTTCTAAGATGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTTCCCAGTGAGGTGATGAAGAGGTTTGAGCTTTAGAGTGCGGTTGCAAAGCTCTTCTCTGACCTGAACAATGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTGTAGCTGTGGACCAACAAATCCAGACTCCTTCAGTACAAGATCTCCAAATAGTTAAACTGGAAGAAGATTCC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CACTGGGAGCAGGAAATTTCCCTTCAAGGGAATTACCCTGGACCAGAGACATCCTGCCAGAGCTTTTGGCATTT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CCGTTACCAAGAAGCATCACGACCCCGAGAGGCCCTCCTCCAGCTCCAGAAGCTCTGTTGTCAGTGGCTAAGGC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CAGAGAAGTGTACAAAAGAGCAGATCCTGGAGTTGCTGGTCCTAGAACAGTTCCCGACTGTCCTTCTCCAGGAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ATCCAGATCTGGGTCAGACAGCAGCATCCGGAGAGTGGAGAGGAGGCAGTGGCCCTGGTGGAAGACTTGCAGAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGAACCTGGAAGACAGAGGCTGGAGCCCTGCCTGATGTGGCTCTGGGAATTCCTGCAGAGAAGAGCAGGGGTGG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CCAGGAGATAGTGAGCAGCTCCCAGGAGGCATGGAGGGATCCAGAACCTGGACTGAAGAACCACCTAGAAATAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CTCAGCAGAATTCTGAAAATGAGGTCACGCTGGATTTTCCAATCCATAGGCCCAAAGTGAACTCCCACGTGGAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TAGGATGAAAACCCACAGCATCTAGATCTTCAAATTCTGGAGAAAAAGAGAGTGTGAAAGACTGCTCAGTGGCT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GGGGTGAGAGTCAAGTCTGGCCAGGTGCTAATCTGGAGAAAAGCCAAGACCTGGAGCGAGCTGGAGTGGCAGGC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CCTGGAGGATGAGAAGGTGGCAGGAGTGCACTGGGGATACAAAGAAACCAAGATTTTTCTGGGAATTCTCAGAG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GCCTGGATCCACGAAAAACTCCGCACCTGCCATCGAAACCACCAGGTGTACCGGATTATGGCTGAGCAGCTGTG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AGAACATGGCTTCCTGTGGACCCTGGAGCAATGTTGCTATCGGTTCAAAAACCTCCTGACCGACTACTGCAAAG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CCAGGAGCACCTACACACCAGGCACCAGTGTCTTCTATGATGAGATGGATGCCCTGTTGAGTCTTGGGGCACTT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TCTAACACCTTTGATGCCTTAGAGGTGGTAGGAGGCCTTCTTTGGGATTGAGAGGATTCCAAAGGGAACCAGGG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CATAGCACTAGAAGATGTGGCGGGATGGTAATGAAATAGTGGAGGAGTCTCAAGAGGAATCCTGGAGGCTTGGT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CCCCAGGCCTTGAGGTGGAATCCCAGTGGCAACTCTCCCCCACAATGGACCTCAGAGCAGTGGGAGCGACGCAG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TCCTGTGGGAAGCATTCAGGCTCAGAATCAGGAGATGTGATTATTGTCCTGGCTCTGTTATGACTAATTTGGGT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CTGGAATGGCCTCATCGGGGGAAAAATTGGTGACAACTTTAAGAAATACTGTTTATATCCCGTCCTCAAATATT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GCTTGACTCAACCCTCTACTGAACCAGTAGTCCAGGGTGGCTCACAAAGACCACTTTGAGGCTCTTGCTCTGCT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CTTTAGCCAAGGAGTCTCCCTTCCTGCCTTCAGTAACAACATTACAGGAAGAGAGGAGAGAAAGGTAGGAGTTA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 AAGATCCAGTCATTTGTTTCCATCTAAAGTGCCCTATAAGCCGGGCATGGTGGCGCAAGCCTGTAGTCCCAGCT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 ACTCGGGAGGCTGGGGCAGGAGAATCACTTGAGCCCAGGAGTTGGAGGCCGCAGTGAGCTGTGATCATGCCACT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GCATTCCAGCCTGGGCGACAGAGTGAGACCCAGACTCAGCTGAAAAATAATAATATTATTAAAAGAATTTAAAA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TAAAGTGTTCCATAGATGTGAACCCTGCGTAGATTATACACACCAGTCTGCCATTTAAAAGGTTTGTTGTTCTT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GGGCAACCTCTTTAAATACCCTTAGCCTCCATTTTCTCATCTGGACAGTGGACATTGTGATGGTTTCTACCTCC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 CTGGGCTGTTATGAGGATCCTGACACAGTATTAGCACTTGGCAAACGTTAGTTTTCATTATCATCATCATTATA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 ATTATTATGAAAATAGATAAGGGCATTATCCTGTACCCTCAAAGGAGTAAAAGGGGGAAAATGAGTCATTAAAC 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TTTCTCTTCTGGGAACTAGACCTTCTTGAGAGGCACTATCATTCTCATTTCACCTGTCACTTCCAGACATGGGA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GCAGAAAGTGAATTTCAGAACTCCATGTCCCCTCCTGCTTTTCTCTGAGCAGGACTTCCAGTTCCCCAGCCAGA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TGGGGTCACAATGCTGCAGAAAAGTGAAGAGCTTTGGAATGAAGATCTCCCGGACTTCAAGGAGATTCAGAAAA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 CGTCCAGTGCAGGTGGGAAATGAATGGGAGCTAGCATTCCACCAACAAAGTCAGCCCTGGGATTCTAAACTCGG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 ACAAGCCAGCACTGGTTAAGGGCTGAGGGGAACCAGGCACTCAGTGCACCCAGTTTACTATTCTGTGGTGTGGA 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 AAGCACAGGACTTGAGAAGCAGGTGGCACCCAGGAAAGCCTGTTCCCCTAAGTAAGTTTGAACTTTAGTTACTT 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 GAAAAAAGGTATAACTGAATTATGAGTGTTTATGATTTTATCTTTATTTTATTTTTTTTGAGATGGAGTCTCAC 3034
Query 1 ------------------ATGCAGTGGCGCCATCTCAGCTCACTGCAACCTCCATCTCCCAGGTTCAAGCGATT 56
||||||||||.|.|||||.|.||||||||.||||.|.|||.|||||||||||.|||
Sbjct 3035 CCTGTCACCCAGGCTGGAATGCAGTGGCACAATCTCGGTTCACTGCAGCCTCTACCTCTCAGGTTCAAGCAATT 3108
Query 57 CTCGTGCCTCGGCCTCCTGAGTAGCTGGGATTACAGGCGTGTGCCACTACACTCA--------ACTAATTTTTG 122
|||.||||||..||||||||||||..|||||||||| |||||||||.|| || .|||||||||.
Sbjct 3109 CTCCTGCCTCACCCTCCTGAGTAGTGGGGATTACAG--GTGTGCCACCAC---CATGCCCGTCTCTAATTTTTA 3177
Query 123 TATTTTTAGGAGAGACGGGGTTTCACCCTGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG---------- 186
|||||||||.|||||||||||||||||.||||||||||||||||||.|||||||||||||||||
Sbjct 3178 TATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCCACCC 3251
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3252 ACCTTGGCCCCCCACAAAGTGCTGGGATTACAGGCGTGAGCCACTGTGCCTGGTCTATCTTTAAATTCCTATCT 3325
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3326 GAATTTGTTTAGGTTTTTTAAATAAAAATCTTTCTTTTTTTTTAGAGACAGGGGTTCACCATGGTGCCCAGGCT 3399
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3400 GATCTCGAACTCCTCCTGGACTCAAGCTATCCTCCCACCTCAGCCTCCCAAAGTACTGGGATTACAGACATGAG 3473
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3474 CCACATGCTTGACCTGAATTTTAACTGCAGTTAATTATCACTTAACCAGCGAATTCACACAGGAGAAATCCCCT 3547
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3548 GGCCGGGCGCGGTGGCTCACACCTGTAATCCCAGCTCTTCGGGAGGCCGAGGTGGGTAGATCACAAGGTCAAGA 3621
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3622 GATCAAGACCATTCTGGCCAACATGGTGAAACTCCGTCTGTACCAAAAATACAAAAATTACCTGGGCATGGTGG 3695
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3696 TACGTGCCTGTAATCCCAGCTACTTGGCAGGCTGAGGCAGGAGCATTGCTTGAACCCATGAGGTGGAGGTTGCA 3769
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3770 GTGAGCCGAGATCACGCCACTGCACTCAAGCCTGGGTGACAGAGCAAGACTCCATCTCTACTACAAAAAAAAAA 3843
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3844 AAAAAAAAAATTCAACCACCTTAGGAAGCCTCTCATTTATGTATTTCTAGCATGTAATTAGTGTTGCACATGGG 3917
Query 187 ---------------------------------- 186
Sbjct 3918 AAGGGCTAATAGATGCTGACAGAGTGAACAACTT 3951
