Nucleotide Global Alignment
Description
- Query:
- TRCN0000473708
- Subject:
- NR_034089.1
- Aligned Length:
- 4034
- Identities:
- 162
- Gaps:
- 3849
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CCGCCCGTTCGCGCTGCCAGCAGCTTCCGCCTGCTACGGTCCTGGCAAGCACCTCGGGATCCCATTCCTTCACA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGGACCCTAGCCAGTTAAAGCTGATACATTCCTGTGGGTCAACTATGCAACTAACTCAGATTTTGAGCAAACAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGCTCTCAAGTTGGTGATCCTCAGGAGTCTCTGCATTAGTTGGACAGCTCTTCTGGAATTATCTTCTAAGTCAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTGTGGGTTGGGTAGGTGGCTCTGCTGATTTTTCGCTGGACTTCCACATTTGGGACGAGTTGGCTGTCATCAGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCTAGAAAGGGTGTGGCCGTTTTACATTGGCTGTTTTCCTCACATTCCTCAAGCAGGTACTGTAATAAAGAACT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGAGAAATACAGTCAGATGGGAAGTAGCCCTTGCTGTCAAGGAGCTTGCCATCTAATGGGGGAGACAGGCAAGT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAACCAAAGACTACACAGTGCAGTATGGTAAGTGCCATGATTTTGATGTGACAGGGCACAGTGGACGACCTTCC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AAATCAAAGCAAGTAACTAGGGGTTGACAATGGTAAGTATCATAGTTGAAGTATCCTTGAACAAGGTTTCAGGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGAAGAAGAAGGGAATTTCATGCAGGGAAACAGCCAAAGCTCAGTGAGTCAAAATATCACAGCATTCTTGGTAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GCCCAATTGTTTTTTCTGTTTTGCTATTTTGGTGGAGAGAAAGGAACACATAAAGGAATAACATGAGAGAAGGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TATTTGGGGAAGTGTAGTAGTTAAGGTTCTGGCTCAAACAACAACTGCAGCTCATAAAGTTGACTTTAGTGGAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGATACTGGGGTATCTCATGGAATCTTGGGAACTGTTGAATAACCAGGGAAACTCTGGGAAACTCACTGGTAGG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AATCCATAAACTGTCCTCCTGGTGGGCTGTAAACAACTCACCCTCTATGCATCTCACATCAAAATTCCAGTTTC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TTGGGAAAACAAGTCTGTTTGCCCAATTTGGGTCATATTTCCACGTCCATGTTACTCAGGCATGATTCATCTGC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AAGTTATGTGTATAGATATTTTGCTACTGTTCCACCCTTACGCTGTGCTGGGGAGGGAGGTGTCACTGTGAGCT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GTGTCGGTGCCTTAAGAGATATCTGTTGTGTCTTATTACTTGGTTGCTTTTCCCCACATGTACAATGACAAAAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TGCCTTCAACCTATTTGATCCAGCCGTTCCAGTACAACTCCTATACTTGCCATCTTTCCAAGCCCAAAGGTACA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TCCAGCTGATGGAAGGAGCATCTTGGTGTTAATATTCTTTTAGTCATGGTCTCTGAAAGTAAAATGTCTATTCT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TCTAATTCTGGCACAATCTTATCTAGCTATAGTTCCTCATGGTCCTGCACTCCATGGACTAAATTGTAAGTATA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ATTACTACCAATGTACTCTATAAATAACTTTTGGGGCCAGGGTGGCAATAGTTGCTAGAGAGAAAAAAAAAAAA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AAGGAAGGAGAAGAAAACAGTGATAGTTCTTATTTTAAAAGGAAAAAAAGAGGCAGGAGGCTCTCTTGAGGCCA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GGAGTTTAAGACCAGCCTAGGCAGCATTTCAAGACCCTGTCTCTACTAAAAAGTAAAAAAAAAATTTAGTCAGG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CATGGTGGCATGCACCTGTAGTCGTAGCTACTCAGGAGACTGAGGTGGGAGGATTGATTGAGCTCAGGAGTTTG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AGGCTGCAGTGAGCAATCATCATGCCATTGCACTCCAGCCTGGGCATCAGAGCAAGACCTTGTCTTTTAGGAAA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AAAAGGCAGGGAAGAGGAATAGGTAATTTTTCAGTGTTCAGACATTCCAGCAATATGTGTGGAGTACTCATTCT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CACTACAGTTTATGAGGCCATAGCTAGTATGTATGACTACCCATCCAAGTTTCCCTGCTTACAGTTACTATTCC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AACTGATTGGGGGGCTTTTCCTAATAGAGTGATTTAAGCCTTCATTTTTAGACATCTAAGCCCTTGGTGATCAT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CAGCATAAAATGTGACAAATTAAACAAAAGCAAGACAGCACATCAGAGAACAACTCTGAGGTGGAATGATTGGG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AACCAATGAATAGTTGTTCAGTAAATGGTTTATATTTTACAGATGATGAAACTGAAACACAAAAAATTTAGATT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AACTCTTAGGTGACAAAGCCAGGATTGAAGCTCATGCGGTCTGGCTCCAGAACAACTCTTCTTCATAGTTACGT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TATACTGCCCCTGCATTGTTGGTATTGAAAAATTTCCTTTCATCTCTGGTAAAAGTCAGCTCTCTAACTACTGC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 ATCTCACAGCTGAACAGATAACTGATACCGTGCTTCCAGAAGATTTTTCTAACAGTGTTTGCAAGCTATAAAAT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AGTGCTTTCACTTAGAAAAGGCTAGACGTGGTGGTTCATGCCTGTAATCCCAGCACTTTGAGAGGCCGAGGCAC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CATGCTGGGAGATAAGGATCCAACATAAGACAAACAGTGCTGATGCTTTTGGAAAGCTCATATTCAAGCTGGGG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 AGACAAACAACATACAAGTGGCTGTAGCTACCTTCTGCATATGGATATCCAGTTTTCCCAGCACCACTTATTAA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 AGAGACTGTCTTTTCTGCAGTGTATATTCTTGGCACCGTTGTTGAAAATGAATTCATTGTAGGTGTGTGGGTTT 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 GTTTCTGGGTTCTCTATTCTGTTCAACTTGTCTATGTGTCTGTTTTTATGCCAGTACCGTGTCATTTTAGTTAC 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 CAGAGCTCTGCAGTATAATTTGAAACCAGGTCATGTGATTCCTCCAGTTTTGTGGTATTAGGATAGGTTTGGCT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 ATTCTGAGTCTTTTGTGGTTCCATATAAATTTTAGAATTTTTTTTTTCTATTTCTGTGAAGAATGTCATTGGTA 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 TTTTGATAGGGATTGCGTTGAATCTGTAGATTGCTTTGGGTAGTATGGACATTTTAACAATATTCATTCTTCTA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 ATCCATGAACATGGAATACCTTTCCATTTTTTGGTGTCCATTTCAATTTCTTTCATCAGTCTTATACTTTTCAT 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 TATAGAGATCTTTCACTTCTTGGATTAACTCCTATGTATTTAATTTTACTTGTAGCTATTGTAAATGGGATTAC 3108
Query 1 ------------------------------------------------ATGCAGTGGCGCCATCTCAGCTCACT 26
.||||.||||||.|.|||||||||||
Sbjct 3109 TTTTTTTTTTTTTTTTGACGGAGTTTCACCCTTGGCATCCAGGCTAGTGTGCAATGGCGCAACCTCAGCTCACT 3182
Query 27 GCAACCTCCATCTCCCAGGTTCAAGCGATTCTCGTGCCTCGGCCTCCTGAGTAGCTGGGATTACAGGCGTGTGC 100
||||||||||.|||||||||||||||.||||||.||||||.|||||||||||||||||.||||||||.|...||
Sbjct 3183 GCAACCTCCACCTCCCAGGTTCAAGCAATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGAATTACAGGTGCCCGC 3256
Query 101 CACTACACTCAACTAATTTTTGTATTTTTAGGAGAGACGGGGTTTCACCCTGTTGGCCAGGCTGGTCTCGAACT 174
|||.||||.|..|||||||||||||||||||.||||||.||||||||||..|||||.|||||||||||.|||||
Sbjct 3257 CACCACACCCGGCTAATTTTTGTATTTTTAGTAGAGACAGGGTTTCACCACGTTGGTCAGGCTGGTCTTGAACT 3330
Query 175 CCTGACCTCAAG-------------------------------------------------------------- 186
||||||||| ||
Sbjct 3331 CCTGACCTC-AGATGATCTGCCCACCTCGACCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCACTTCCAG 3403
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3404 CAAGGGATTACTTTTTTAATCTCTTTTTCAGATTTTTCACTGTTGGCATATAGAAATCCTACTAATTTTTGTAT 3477
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3478 GTTGATTTTGTATCCTGGAACTTTACTGAATCTGTTTATAATTTGTGTATTTGTTTATAGTAGTTTTTTGGTGG 3551
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3552 ACTCTTTCAGTTTTTCCAAATATAAGATCATATCATTGGCAAACAAGGACAGTTTGATTTCTTCTATTCCAATT 3625
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3626 TGGATGCCTTTATTTCTTTCTGTTGTCTGATTGCTCTAGTTAGGACTTCCAGTACTATGTTGAATAACAGTGAT 3699
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3700 GAAAGTGGGCATCCTTGCCATGTTCCAGATCTTAGAAAAGAGGCTTTCAGTTTTTCACCATTCAGTTTGATACT 3773
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3774 AGCTGTGGCAGCTTCCATGAGAATCACGCAGTTTGAAGAAGCATTTCACTGAAAAATAGGGATTGCTGTTCTGG 3847
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3848 AAAGACAAAACAATTGTCTACAATTCTAAAGAAGAAGTGAACACAATAATTAAATCAATGTTATTCTGGGTCTA 3921
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3922 AAGCTTATATTCTTAATTACTATATTATCCCATCTTAAAATTTTAATTTGGAAATTATATATCTAAATATTATA 3995
Query 187 -------------------------------------- 186
Sbjct 3996 ATCAATAAAGTTGAACACACATGATGAAGTGTGAAAAG 4033
