Nucleotide Global Alignment
Description
- Query:
- TRCN0000473708
- Subject:
- NR_073189.3
- Aligned Length:
- 6129
- Identities:
- 160
- Gaps:
- 5943
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCACAACACAAGGAGAAACTTGGTGTCCAGGGGAGGCCCCCGGCGGCTGGAGCGCGGCGGCAGCGGGCGCAGAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCCGGAGGGAGAGGAGGCGAGGGGCGGCCCGAGCGCGGGGCGGGAGCGAGGCCAGCGGTCATGTGCCCGTGCCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCTGCACCGCGGCCGCGGCCCCCCGGCCGTGTGCGCCTGCAGCGCGGGTCGCCTGGGGCTGCGCTCGTCCGCCG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGCAGCTCACCGCCGCCCGGCTCAAGGCGCTAGGCGACGAGCTGCACCAGCGCACCATGTGGCGGCGCCGCGCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CGGAGCCGGAGGGCGCCGGCGCCCGGCGCGCTCCCCACCTACTGGCCTTGGCTGTGCGCGGCCGCGCAGGTGGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGCGCTGGCGGCCTGGCTGCTCGGCAGGCGGAACTTGTAGGAACGCGGGGCTTCTTGGTGGGGCCGGAGCCGAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACCCAGCCGGAGCGAGCAACAGCCTACATCTGACCTCAGAATACCAGCCGCTCCGGCCTTTCTTGTGCTTTTGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TTTAATTTGGGGAAACTCATTTTTTCCCAGCTCTGAGCCCCAGGGGAGGCTCCTCTGAGGCTGGGGAGGCCTGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGGAGGATGGGTATGATTTAACCAGTCAATACTCAAAGATACAGGAGAGAGGGAACAAAAGACGCTTTATGGTG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GTTGAGATCTTCCCATGTCAACACGCAAAGGTTTTCCTCATCCTTTTTAATGGCTGCATGATGTTCTGTTGCTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGATGAACCAGGATTTCCTTATATGGTCACTTCCTTGGGAACATTTGCATTGTTTCCTGTTTTCTGGTTGGTGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AAACCCTGTGTCCTTGGAGAAAGCTGGTTCCCGTTTTCCAGAGGGGGAGCCCAGAGCTTGAAAGGCCGCGGTTG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GCACTTCGAGAAGGAAGTGGAGAGTAAAGACAGCGCCTGGAGCGATCGTAGAAACACAGAATGGGACTGGGGAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GCCCTTTGGAAATCCAGCTGCAGAAACAGACACCCCAATGCTATTTACATACAGCTCTATATATATAAAAAAAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AAAATATGAATATTACGTATCAGTGCATGCCTTGTTGAGGACGTGGTTGCCTTCCTTTTCTGCACCTTGCGATG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TGAACTTTGATATTCTGTAATGTCTGGGGCGCCAGAAGAGAGATGCCTGCTGTGTACTTAGAAACTATTTGCAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AGACTGGTGGGAATTAGCCCCAGCATCGGCCAACTGCCTGGGGATAGATGCTGGTGGAATAAGAGGTAACAGTG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CAAAAGGCATGATAGAAAAAAAAAGTGAGGACTTGGGACCGATTGTGTAGGGGCAGTCTGGGATGCCTCCATTT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CTTGACTCGTCCTAGCCTCTCCCTCTGTACTTACCTAGGTCGATCGCTAGATCCCACTGTCACGTCAAGAGAAA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGGGATTTTTGTGTCTCTGGTGCTTCACTTAAAATTTTGCTGGTGCTAAGTGCGTTCCTGCTGGTGCTGCTGTG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GTATTCTGTTGACAGACTTGGAAGGCCAGGGGACAAGAGAGATTTCTATTTTGCTGTTTCAGATTCTTTTTTTT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TTTTTTTTAAGGGACAAGTTGCAAAAGTGCCACTTGAGAGTCTCTTCTCTTCTTCTACCTGGGGACGAATATCC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AGAGGTGGTTTGGAGCAAACCTTGGGGTCTAGGAGGGAGGATGGCATTGAGAGGCTTGCTGGTTATGAGGCAGA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AAGCTGACCTCATGCATGACTTGGTTGCTATCTCCCCCACCCCCACAAAAGTGTCCTCGGAGTTCAGCCCACAG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CCTCCTCCACTCCCCAAGGGGATTTCAGGGTTTAGGTTTTATGGATTAAAGAGCCAAGAAATGGCTACATTCTG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TTCAAAGATGATTTATAACCGGGGGATGTTGTGGGAGGGAGTGGGCCATTTAAATGAAATGCACCAGCATCTCA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CTGATTGACAGAGGTCTGATTTTTTTCCCCCCAAGGATAAGCTACTATTTTCAGAAGTTTCTAGAAGGGCTAAA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 AAAAGATGTGTGCTGGACGGAGACTTGGCTGCAAAGACTCTTCAGGGAGCAGTGATTATTTTTTGCTTTCATTT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TCGAAAAATCCAACATAAGCAGGTATTCTTCCTCTGTGCAGGATACCACACACTGCCATTTTCAAAGCCGAGGT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GGCGAGGTGTCAGGCTGCAGATTCGGACGGTCATTCTCCAAGGCTGGATTTGCAGGTCACCACCCGGTACCTAT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 AGACAGAGGGTCCAGCAGGCTGGTTAGCAGACACCGCTCCAGTTCTAAGACGCCAGCAGTGGGATCCATGTTTA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AGGTGGATGCGGCTGAAATGGGAATTATCCCCCCACAGGCTTTGCTGTACAGTTCTAAGAAGCCAGCAGTGGGA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TCCACATTTGTTAAGGTGGATGCGGCTGAAATGGGAATTATCCCTCCATAGGCTTTGCTGTAAATGACCAGGTC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CTTTAGAATGTACAACCTCTCAGTGCTGCTGCAAGCTGGGAGCTGGATTTCTTTCTGTCTTCCTTTTAAAATCC 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GTTCCTTGTGTTTTCCTAAATAGCCCTTTAAAGAGAAATGCAACCCCAGGGCTGCTGAATGCCAGGGAAGACTC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CCCCACCCCGCAGCTTTGAACTCAGCAAACCAAAAAAAAAAAAAGAAGAATAATGCTTATTTTGGGAGAACGTG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TTTCTCCTCATTACTCGTGCCCTCCCCCTAGCTGATGTTTGCAGGGGACCCTCGCTTAGCTGGGGACTGCAGAG 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 AGCAGTGGGTAATATTCCCACAAAGCTACGAACTTAGAGAAGGCAAATTCATTAGAATAATATGAAATACAGTC 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 ACTGCTTCTATTTAATCACTTTCTTAGCCACAGACTAGGGTCTTTCCAGCTCCCCCCATTTTCTGGGGAGGGGC 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GTCCATTACTACACAGCTGTATCCAATCACAGTTCTCTGCTTCTTTAAGGCTGTACCTTCAAGATCGTAGTGGG 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 GGCATGCTGACCACCTGTAGACACAGGAGAAGATGAAAGGTGAGAGGATCCCTTTTTCAGCCCCGACTTGCCTA 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 CTGGCTTTTGATGTTTCCCCTGGAGGATACAAACTCCAAACGCTGGGGTTGGCATTTTGGGTGATTTTGATTTC 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 AATGAAGCCACTTTGCTGAGAGAACTGGGGCACCCACGACCTCCTGATAGAGCTTCTCAGCCAAGTCCCTTGTA 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 GATATTCTCCTGTTTTATTAGAGACCACGTATTTATCGAATCCTGACCTTTCCTTGCACATCATTCATTGGAGT 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 GCACTTCTCGACTGCCCCGATTTTTGACACGGGGTTGTTTTTAATGCTTGTTTTTATATGAGATTTGACTTCTT 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 GATGGACATTTGTATTAGGAAATTGAAGCATGATATATATGTATATATTGTCTCCACCATCTCTCCTGTTGTAT 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 TACTTGGATTGCATGAGATAGTGGGGTGGTTCTTGTTTTTTAAAAAATATTTCCACAGTGTGCAAAGTGCTGGC 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 AACATCCCTCCCTCTCCTCCACCGCTCCCCCACTTTTCTCTGGCTGCCAAGGAGTCATTGATTTTGATTAGCTT 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 CACTGCAGAGCGTCTGTGAAGAGAGAGAGAGAGAAAGGGAGGGAGGCTTTGAAATAAATTTTAAAAAAGACCTC 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 ATATCGGGTTTCAGCAGACAGCAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAC 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 CGTACAAGCAGAGGGAGGCCTCTGAGATCATCGTTTAGGTAGCTTGCTGCATAATGAGATGAAGAGACTTTTGC 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 CTCTTCATTTCTGATGGTGCTGCTTGCTCTCAGAGAGTGGGGAGCCAGGAACCGCTGGGACTGGAGCCCCCGGG 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 ACTTCAACACTCCGAATGAGATCCAGTCCTTTCTGGAAGCTTCTCACCCCCACCTGATCTCCCACAAACAAATA 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 CAATCTCTTCAAATTTGGGGGTCCGTTTCCTATTCTCTTTGTTATTGGTGTAGCTTGAGTAGGAAGTTTCTCTG 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 GGGAGCCCATTGGCCCCAATGGCTGCTGTCCATGGTCCTAGGCCGTGCGCATGTCCTAGACCCCAGTTCCTGTT 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 TTGTTTTTTTTTGGGTTTTTTTTGGCCCTGCGCATCTCTTAGAGCCCAGTTCCTGTTTTTTTGTTCGTTTTTTT 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 TTTTTTTTTTTAGCCGCCTTCATTTGGATACTGGGGACTTCTTTTCCACTTCTTCTTCTTCTTCTATTTTATTT 4218
Query 1 ----------------------------------ATGCAGTGGCGCCATCTCAGCTCACTGCAACCTCCATCTC 40
.||||||||.||.|.|||||||||||||||||||||.|||
Sbjct 4219 TGAGACAGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGTGCGAGCTCAGCTCACTGCAACCTCCACCTC 4292
Query 41 CCAGGTTCAAGCGATTCTCGTGCCTCGGCCTCCTGAGTAGCTGGGATTACAGGCGTGTGCCACTACACTCAACT 114
|||||||||||||||||||.||||||.|||||||||||||||||||||||||||.....||||.||.|||..||
Sbjct 4293 CCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCCACCACCACGCTCGGCT 4366
Query 115 AATTTTTGTATTTTTAGGAGAGACGGGGTTTCACCCTGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG-- 186
|||||||||||||||||..||||.|||||||.|||.||||||||||..||||.|.|||||||||.|||||||
Sbjct 4367 AATTTTTGTATTTTTAGTGGAGATGGGGTTTTACCATGTTGGCCAGAGTGGTTTTGAACTCCTGGCCTCAAGTG 4440
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4441 ATCCACCTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGAGCTCAGCCTCCACTTCTTATT 4514
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4515 TTGATTCTTTTCTGTTTTGATGGTGAGAGGAAAGGGTGATTTACCCAATACTGTCACAGAAAAATGAAACTGTG 4588
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4589 ACTGGTTTTCACAATGTATGTAGCTGATCTCATGTTCTCCTATTATTATGTTTCTGACAGTGATAAAATATCAC 4662
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4663 TCTCCCTCCCTGGGGCATTAGAGGAGTCCTCACCCACCCACCTCCTACACAAGTATCTTTTAGGGACAGTGGCT 4736
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4737 CACCATTGTGGACTTTTTGAGTGTCCACCTGATATTACAAGTTGCATTGACCAGAACACAGATTTTGCTCTTCT 4810
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4811 GTGTCAATACCCATTTCTTTTCTGAAGGTCAGAAGTTGGTTAAGGGTTTGGGGGACCAGCTAGACACTCTTCTT 4884
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4885 AGTCCCATGGAGCTGACTGGAAGTTCCATGAGGGGAGGAAATTGATGTCAAAGTGTCATTTTAAAGCTTAAGCT 4958
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4959 GAAAGTTTATTTTTTAAATTCTCATTCATTCATTTAGCATATATTGATTGAGCATCTACAATGTGCCAGTTGTA 5032
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5033 GAATTCCATCTCAGAAGAGACTTGACTTGTGGATGGTGGAGGGGCAGTCCTGCTCGGAAGCAGATGATGTGAAA 5106
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5107 TGTTCCTTTCCAGTCTGGTTCACGATGTTTAACAGATTTGTCAGGTCACCACTGTGACCCCAAGCTTTGCTGGC 5180
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5181 AGATTGTTATATAGTATTTACTGAGAGCCCTGCTATCTGGTAAAGGCAGTTAAAAAGCCTGCAATCTCGACTCA 5254
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5255 TTTCCAGCATGAACAGACTGGTCCTTGCTGCTTTACACAATAATCAAAGCTACCTTTTATGGCGTGCTCGCCAC 5328
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5329 TCCCAAGCACTGGGCGAAGTGCTTTACCCGTCTTCCCCTCCGCGATGCCTCATGCCCACTTTAGCAGATAGTAC 5402
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5403 TGTTAGCATTCCCATTTTACAGTGGAGGAAGCTGAGGCTCAGAGAGGTTAAGCAACTTAGCTGAAGGCCACACC 5476
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5477 ACCAGCGAAGTGCCTGAGCCAAGATTTGGACTCGAGTCCATGGGACCCCCACGCTCGTGAGCTGACTGCTCTGC 5550
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5551 TCCACTGGGTCCCTTCATGAGGTCGTCCCACAGCACTGCTAGTTCCAGGGCGAGTGCCAGCACATGGCCCCACT 5624
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5625 GGGAGCCGGGGCCTGACTTAGGTCTACTGGAAAAAGTGTCACCTTTGGGGACACTCAAGGACAGGCTGGTTGGT 5698
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5699 TTCGTTGTGGATTTTATATACTCATGCCCTAACCCTGTGTTCCTGGTTTCTATAAGGCCCCGGGGAAGGTGCAA 5772
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5773 GGAATTTGCAAATAGGGCCTGTATGACTTATTTCCTAGGACACGGGAAGCTTTTCTTACCTCCTTTCTACCCTC 5846
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5847 TTCTCCAACCTGAACTCCCAAGTTTCTTCTCCTGAAGGTCTTTGCACTATAAGCGCCAAGGAGCCCGTGTGCGT 5920
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5921 GGCAGGGGCGGCTGGGAGGGTATCTGGAGAACCTTAGTGAGGCCTCTGGCCTAGCCAGAGAGGCAATAAGCTTG 5994
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5995 GGGACGTTCCGTTCTGGGTTCTGACGTTGTTGGTTCTGACGTCGTTGTGCTCTTTTGTAAGAGGAATTTCATAC 6068
Query 187 ------------------------------------------------------------- 186
Sbjct 6069 CTTGGAGACGCTTTGTACATATTTGTAATGACTTTATTAAAAAACTGATTGTGCACTTCTA 6129
