Nucleotide Global Alignment
Description
- Query:
- TRCN0000473708
- Subject:
- NR_135912.2
- Aligned Length:
- 4361
- Identities:
- 160
- Gaps:
- 4178
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTCATTCGAGGTCCGGGTCCGGCTTGCGGGGTCAGCGAACTGGAGAGGCGCCATGGGCTGGAGTAAGCCCCCCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCACCTTCCGTCCTCGATCGTTCCCCTTGTGGAAGTAGTCCCGGGTCTCGTGGGATCCTCGCCGCCCGCTCCCG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCCTGCGCTGTCGGTTCCCCCGCGCCTGGGCGGACCCTAACCCCACCCGGCCCTCCGCACCGCAGCCCCGGCTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CACCAGGTCCTCTGCAGACTGGCCGGACAGCCTGGCCTTTTCCAGCTCAGGTTCCTAATCTGTAAAATGGGCGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGCCGTGGGAAGGGGAGGAAGAGGCAGAAAGGCACTGGACTCCAGGAAAGGGGTCGGGGAACGTGCAGGGGTTT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGGCGCCAGACACACCACGTTCCGGCCAAGTGGCTCCTTACTGGCTGTGAACGTGGGCCAGTCACTGTCTCCAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCCGCAATCTTCGGACTCATTCCGGAAGGCAGTGTAGCCTAATGGTGGAGGGTTCCGACTCTGGAGCCAGGGTT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GAAGTCCTCCCTCTTCCTGTGACTTTGAGCGAGTGACTTCACCCCTTGGGCCTCAGCTTCTTCATCTCCAAAAT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AATGGCAATCATACTACTGTTTTAGACACAGTAAGTGTTATAAACGTGTTTTTGTTTGTTTGTTTGAGACAAGA 666
Query 1 -------------------------ATGCAGTGGCGCCATCTCAGCTCACTGCAACCTCCATCTCCCAGGTTCA 49
.|||||.|||||.|||||.||.|||||||.|||||..|||||.||||||
Sbjct 667 GTTTTGCTCTGTCGCCCAGGCTGGAGTGCAGCGGCGCGATCTCGGCCCACTGCAGCCTCCGCCTCCCGGGTTCA 740
Query 50 AGCGATTCTCGTGCCTCGGCCTCCTGAGTAGCTGGGATTACAGGCGTGTGCCACTACACTCAA--CTAATTTTT 121
|||.||||||.||||||.|||.|||||||||||||||||||| |||||..|||| |||.|.| |||||||||
Sbjct 741 AGCAATTCTCCTGCCTCAGCCACCTGAGTAGCTGGGATTACA-GCGTGCACCAC--CACGCCAGGCTAATTTTT 811
Query 122 GTATTTTTAGGAGAGACGGGGTTTCACCCTGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG--------- 186
|||||.||||.|||||||||||||..||.||||||||||||||||||||||||||||||||||.|
Sbjct 812 GTATTCTTAGTAGAGACGGGGTTTTGCCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCGCC 885
Query 187 -------------------------------------------------------------------------- 186
Sbjct 886 CGCCTCGGCCTCTCAAAGTGCTGCGATTACAGGCGTGAGCCACTGCGCCCGGTAGTAAACGTGTTTCTTTAAGA 959
Query 187 -------------------------------------------------------------------------- 186
Sbjct 960 ATATACTAACAAACTGCAAGGTGATGCGGTCACAGAAGATCTTATTAGACGGAATGCTGAACACAACGACTGTG 1033
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1034 TCATTTTTTCCCTGGAGGAACTCTCGTTGCATCAGCAAGAAATAGAAAGACTAGAACACATTGATAAATGGTGC 1107
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1108 CGGGATTTAAAAATTCTCTATCTTCAAAATAATCTTATTGGGAAAATTGAAAATGTTAGCAAACTCAAGAAACT 1181
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1182 TGAATATTTGAATTTAGCTTTAAACAACATTGAAAAAATAGAAAACTTGGAAGATGTCATCTATTGACTTCCTG 1255
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1256 ATGTGGACGATGCAGATTTTGTTCTCTCACACCATCTGCAAGGTTCTCAATTTTCTCCTACCCACCCTCCGTGT 1329
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1330 ATTTTCATATGACATTGACAGGATATCATAATGAAATATGGCATACGGACCCATTTACGGGGACTGGTCTTTTG 1403
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1404 AATTAACTGTGTTGGGAGAGGATATTACACTTGCTCCCCAACTCTCCCACATCTAATCTCTGGCCTTTCTTATC 1477
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1478 CTACCTGCCTCCTCCTGCCTTCTTCCAAGCTGGTCTCTCCATCTCCACCTGTGTCATGAATTCCAGGCAGGATG 1551
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1552 TGAAGAGCTGGCAAAACTTGACCTGACTGTGAATTTCATTGGAGAGCTGAGCAGCATTAAAAACTTGCAGCACA 1625
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1626 ATATCCATCTGAAGGAGCTCTTTCTCATGGGGAACCCATGTGCTTCCTTTGACCACTATAGGGAGTTCGTGGTA 1699
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1700 GCAACTCTTCCACAATTAAAGTTCCTCTTTAGAGAGCAAAGACCACCTACAGGCACCAGACACAGAGGAACACA 1773
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1774 ACACAAAGAAATTAGACAACAGTGAAGATGACTTGGAATTCTGGAATAAGCCCTGTTTGTTTACTCCTGAATCA 1847
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1848 AGATTGGAAACTCTTAGACACATGGAAAAACAACGGAAGAAACAGGAAAAATTAAGTGAAAAAAAGAAGAAAGT 1921
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1922 GAAACCACCCAGGACTTTGATCACTGAAGATGGGAAAGCCCTAAATGTGAATGAGCCCAAAATTGACTTCTCTT 1995
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1996 TGAAAGATAACGAAAAGCAGATCATCCTGGACCTTGCTGTCTATAGGTATATGGATACCTCTTTAATCGATGTT 2069
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2070 GATGTGCAACCAACTTACGTGCGAGTAATGATCAAAGGAAAGCCATTTCAGCTTGTCCTTCCTGCAGAAGTGAA 2143
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2144 ACCCGATAGTAGTTCTGCTAAAAGATCTCAGACAACGGGTCATTTGGTCATCTGCATGCCCAAGGTAGGAGAAG 2217
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2218 TAATCACAGGTGGTCAGCGAGCATTCAAATCTATGAAAACTACCTCGGACAGGAGCAGAGAACAAACAAATACA 2291
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2292 AGAAGCAAGCACATGGAGAAACTAGAAGTAGACCCTAGCAAGCACTCATTCCCTGATGTGACTAACATAGTTCA 2365
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2366 AGAGAAAAAACACACACCCAGAAGACGACCTGAACCCAAAATTATACCAAGTGAGGAAGACCCAACCTTTGAAG 2439
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2440 ACAACCCTGAAGTGCCTCCGCTGATTTGAAACATCTGGCTGCGTTGCCATTGGCTGAGACCCACCAGGTCCAGT 2513
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2514 TTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGAGTTATTTGTCAATATCGCTGCTCC 2587
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2588 AGTGTTTTAACTCTTACTTTGCATAGTAATATCCTTAAGATAGCTTAAAATTAAAATGTATGTCTTAAATGCTA 2661
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2662 TAACTCATCATTTACCTATAATAAAGGGTTGGTATTGAAAATGTTTAGTAAGATCATAGAACTATTGCATAAAA 2735
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2736 CACTGATTATAAATACTGTCTACTTATGCAAAGTATTAATTCATAGATAAAAGGACTGAGTATTAAATTGGTAC 2809
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2810 TTCAGCAAAGTGGTCAAGCTTAGAAGTTAAAACTGTAATTTCAGACCCAATTGGAATACTTTAATATGATTTTA 2883
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2884 AACAGCATTTCCATTTTCCTTCCCATGATGTGTCTGCTTTCTCTGGTGGCATGGTATAATGGCAAGAATATGAG 2957
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2958 TTTTGAAACCAGACACTCTATATTTGGATTCCAGCTCAATCACTTTGTAAAGACCTTCAGCAAGTCCTTTAATT 3031
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3032 CTCTGAGCCTTAGTGGCTTCATGTATAATCTGGGAATAATAACACTTGCCTCACAGGTTTGTCTCAAGATAAAC 3105
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3106 TGCAGAAAGCACTTAGTACAGTGTCAGCCATACATTTAGAGCCTCTTCTCTCTCTCCTTCTTCCCTTTCTCCTC 3179
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3180 TCTCTTCTCCTCCCTTTCTCCTGTCTCTCCTCCTCCCTGCTCCTTCTTCCCCTCCCTCCCCAATTACTTTTCTC 3253
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3254 CCCTTATTCTTTTTCTTCACCTTTTTACTCCCCATCCCACTCCTTCTCCTCTATTTCCTTCTTTACTTTTTTAA 3327
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3328 TATCCTACCTCTTCTTTATCTAGAACATTATGAATTCAATATTTCACATACATTGTAGGACAAATTACTGTTAC 3401
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3402 TCTGATCATGATATAGCAACATTTAAGTCAGTTTCCCCAAATATTCATTCAACAAATACTTATTGAGCAACTAT 3475
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3476 TGAGTGCTAGCCCCCTCTCTGTTCATCAGGGATTTAGTAGTAACAAAGCAGACAAATACATACACACAGACTAT 3549
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3550 GTCAGGTGGTGTTCAGAGCTGTGAAGGAGAGTCAGAGTGAGGGAATCAAGGGTGATGGGTGCTTTTTCAGACAG 3623
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3624 GGCCTTTCTCTATTAAACAGGCTTCCAGTGGAAGACTCTGCTAATGTTTAGCAGATAACCAAAATGCATCAGTT 3697
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3698 AGAAAAAAATATGATGAGAATGAGGGACTGGTTATAGGAATGCAATTGGGCACAAATGTGGGAAGAGCTGGGTA 3771
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3772 GTGAAGCTCTAGAAGGGAGAGGTAGAGAATTGGAAGAAGAAGCACTGGTACAGGTAGACAATTCAGAACTTGCA 3845
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3846 CAGAATCTGAGAAGCTGAAGTAGGACTGTGATTGGGAGCTTGTGGAGAGGTCTATGGAAATTATCATGCTGCTG 3919
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3920 AAATTGTTGCCTCTATTTATCTGCTACCCTTCTGGTCCGTGGCCAAGATCCTGGTGGGTGGGCTTGGAGCCAGC 3993
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3994 CTTCGTCAGCAGGCCTGCGGTAAGAAAGATGGGATGGACACACAGTGGTGGAGATCAAGGATCAGCTGCAGCAG 4067
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4068 GCTGGGTCCCTCTGCATCTGTCCATCACTGCGACTGATGGCAATGACTGAGTATAACACCTTTCTTCATGGTCA 4141
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4142 ACTCTACCCAGGAACCACGTAGGGAAGGAAATTCTGGAAAACAGCTCCCAGCCTTAGCCAACTTGACATATCAT 4215
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4216 AATCCAACAGAACTCAACCTCTACCAACTTGGAAATCATGTACATTTGTCAGGACTGTATTTAATTTCCACATA 4289
Query 187 --------------------------------------------------------------------- 186
Sbjct 4290 GAGAGAAAGCAAAATTATACTTTTGACCAAACTAATAGAATTATCCATTAAACAAACAAAACTGTGCCA 4358
