Nucleotide Global Alignment
Description
- Query:
- TRCN0000473708
- Subject:
- NR_138024.2
- Aligned Length:
- 6165
- Identities:
- 162
- Gaps:
- 5979
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGCGGGTCCTGAGTCGCGACCCTGGTCCGGACCTGACCTGAATTGCGACCCCAACCTGGACTGCTCCCCTGAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGCAACCCCTACCCCCGCCCACCAGTATGGCCCGGCACGTGTTCCTAACGGGGCCCCCAGGTTAGAGCCTCCAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTGGAAAACGTGAATGCCGAGTTGGGCAGTATGTGGTCGACCTGACTTCTTTTGAGCAGTTGGCACTACCCGTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTGAGGAATGTGAGCCGACTGCAGCAGTGGCCCAGGGCAAAGAGTGTGCGTCATCGATGAGATTGGGAAGATGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGCTCTTCAGTCAGCTTTTCATTCAAGCTGTTCGTCAGACGCTGTCTACCCCAGGGACTATAATCCTTGGCACA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATCCCAGTTCCTAAAGGAAAGCCACTGGCTCTTGTAGAAGAAATCAGAAACAGAAAGGATGTGAAGGTGTTTAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGTCACCAAGGAAAACAGAAACCACCTTCTGCCAGATATCGTGACGTGCGTGCAGAGCAGCAGGAAGTGAAGAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ACGTGCATTCCTGCCTTCCGTGAAGGAGTGCCCAGTTCAAGAGGAGCCTGATGGAGCCCTGCCTGTCGAGGCTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TATGCCTATGGGGTTATGGAACCTTGTGGGCTTTTCTAGAGAAAACTCAACAGCTGTTTCCCATAAAATGTTTA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AAAGATCAAATTAGCCTTAATGCTGGATTGTCTGTACAAGATTAACTATCCATTGTGGCTTATCTATGCTTAAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GATTTCTTGTTTATTTCCTCTTGCAGTCATGCACATGATTTGGGTAAACTGTGAGATGAGAAATGGTTTTCAGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GTATTAGATGGAATTCACCCCCGTTGAAGTTTATAAATGTGTTCAGGGGAAGCGGGAGGAAAGAGTTCACTGCC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TAATCAGTTTTGCATGTCATGAAAATTAAATTCCTCTCCAGGTGCAGCTTCAGCCTCATGCAACTTAAAGTGAT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AACAGTTATTTGATTTTTTAAAAAATATTATTCCAAAAGAAAACCATTTTAGGTCATCTCCCCCAACTCTGTTT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GCTTACTGCTTAATAAATATAAAAATAAATCTGATGGTTACAGACAGGAGGCATTGTGTGGGAGGAATACACAA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CCTTTGGAAGTGTTGATAGCATCTGATATTCAGCCGACCAGATGACAAGAGCTCAGGCCCACGGGTTTGCATAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GAGCACTGCTTTGCCTTAGTTTACTCGGGAGCAATTTTGAATCTTTCTATGCCTAGTTTCCCTTCCAGAAAAGC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AGGAAGTGGCTGTCATCTCAGGAGTGATGTCACACCACAGAAGGAAACTGTCAACCACTCCACACAACTGTGGA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GAGTGCCCAGTGCCAGGGGCTGGGCTTATCAGGAATAATGGTGTAGCAATGCGGAGTTCAGCCCATAACAGGGG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TACTATAAAAATGAAGTAGGAAAGTAGAAGAGACCCCTGAAACCCCAGAACTGATAGAGGATAAAAACTTCCCT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CCAAGTGGTAGATGGTACTGGAGTGATAAACAGTTCAGTGTTTTTAGGTCATTTTTGGTGAAGATCTATGAATT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TCCAGGATTTTTTTTTAACAAATTAGCATTGGCTACAAACCCACTGGTATAAGCAGCAGTGTGCCTTCTCTCTA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 ACTGTGGACAAGTCGGGCATGTGGCGGGTGAGGAGCCCTGGGCTGGGCACTGGGGCACAGTGAATGGGGCGGGA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GGGGCTCACATCAAAACCAAAATGGCACGCAGCCCAGGTCTGGTTCCTCCATCAGTGTCTCTTTCCTCAGCGCT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TTTCTTCCGAGGTAACTTTGTGAAGCTTGACTTGGACTTGCCTAGCCTTGGAGGGACCACAACAGGGAGGCCTA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 ATAGATTATGAACTAAGCCCTCAAAAGGGCTACCTGCCCAGGAGGAGGAAGTGGGCATCTCCTTCCACAGTCCC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TGCCTGGCGGGGCTGTTCAGGGAGACTGAGTTCCGAGCTCAGGATGTCTGGCAGGCTGGCTGTGACTTCCAGCC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 ACCATCACCAGGACACCGGTGTGGGCTGCATGCCTCAGTGGGCCAGGAGAGGCACGGCCTCTGAGTTGGGTAGA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GGCTTCCCACAAAGGCCTGGGAACCTGATCCTGGCCGTAAATCTGAAAGTACCACAGCCCTCAGGAGAACCAAG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AGATAGGGAGGCAGGCTGGGGAAATGTCATCAATGTGCACCCAGGCGTGGTGGAGCTGGTCAGCCCCAGCTGGA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GTGGGACCCCATCAAGATGGAGCCTTTCCTGGCACCTCCGGGAGGCCGTTTTGCGTTTCCGCCCTTCATGCATC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TGAAACACCAAGGGCCATGTTCCTTCTGGTGCTTGTCCTTTTGAGCTTGGTGTTTCAGCCGTGTCTGTTTTGTA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GACTTTGATTTTGTCTTAAATGAGAAAGAAAGCTGGTGAAGGTTATTTCAAAGTTAAATAGCTAGTCTGAGGGG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CTTATCACTGAAGCCAGTTGTGCTTATGTGGGGTGGGAGTGTCACTGCCTACTTGAAAGTATGCACTTGTGTGG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 AACAGATTCAGGGTGGCCCCTAGCACTTGGGGCTGCGGGAGCTTCTGCACACTTTCCCTTTAACGGTAAAGAGA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CAAGCTTGGAGTGTTTAAGTGGTTCGTTCAGGAGCACAGTGATAGCGGTGACAAAGGAGATTTGAACCCACGTC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TGCGTGGCTCCAAAGTTCACTCTTTCATCACTCCCTGCTGCGTCCTTCTTGAGGCTTTAGCATTTTTAGTGTGT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TTTGTGCCCCCAGACCTCAGAGTTGACATTTAGCAGTGATAAACTGCTGTAAATCCAAAGAACGTTTAGTGTCT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 CTTGTGGTGAGGTCCTGAAATGATTGTTGTATTAGTCAAACAGAATGATCATGGAGCATGTATGGAGATGTCAG 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 ATGCAATCCCTGTATTGTAAGGCAATGACATTTAATGAAGGATAAGATGAATTCACAGATAACTAGAACTCAGG 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 GCCAAACGCACACAGCCTGTAGCAACAGTGTCATGCTGAGATTTAAAGGAAGAAGAGGTGCCGTGGCAGAACTC 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 CACGTGACCGTCCCCTCCCTGCACGCAGCCAGGATGAGAGGAGCAGAGCTGAGCGCCACCTCCCTGTCGGTGCC 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 ACGGCTGAGGTGAGGAGCTCTTGCCGGATGGTGGGGTGGGGGCAGCAGGGCAGATTGAAGTCAGGGATTCTCTT 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 ATACCTGAGTTTGGAATGCCTCCTATTCAAACAAAGCAAAATATCTAACAGATGGTTGGATATGAGTCTCAGGG 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 AGGAATTCAATTTGAAAAGCACAGAATTAACATGTATTGCTTATATGAAGAATCTCAGCTAGAATAACAAGGTC 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 GGATGGGAGGAATCAGGACTGATTTGAAGCACGATTTACTAAATCATTCTTTCCTTTTCCTCCTTAGCAGATCA 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 TACCGCCAGCTGCTTAACACGTAATAGTTTAATAAATTGTTTCTTCTTACCTCTCAGTGAGGGTAAGCACATGC 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 AGGGAGATGGGTGAGTCTTTTAAATGGATAGTGTCATCTCTGATGATCAGCCTTGACAGGGAGAGATCCTAGTA 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 AAGCTGCAAATTCAGGCACTCAGTTCCCAGCCCTCCAGTTATCAAGGGGGTGGGAACGCTGGTGGGCTGGAAAA 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 TGTGGAACAGACCTGCTCCTCTTCTTTTCCTGCCAATTACCGTATTCATAGAAGGTTGTGTCTGTGGATCACAC 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 CTGTGTGTGTGCTGATGGCGGATGCTTGTGTAGCATAGTGACTTGGGACAAAACAGCATGGTAGATGAGGCTGG 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 AGACGGGTGGGCTAAGTAAACAGGCATTGCATTGCACATTTTGTGGGCAAAGAAGTTGAAGCATCGCATGATTT 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 TAACAAATTACTTGCCAGATGATTTCAACACACTGCAAAATTTAGAATCAATAATGCCAAATTGGCCACATGAT 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 TTATATAAAACCAAGTGCTATGGTTTTAATATTATCTTTAGAGGAGAAACCATTTTGATCTGTGTCCAAATAAC 3996
Query 1 -------------------------------------------------------ATGCAGTGGCGCCATCTCA 19
.||||||||.||.|||||.
Sbjct 3997 TCTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTCACTCTGTCGCTTGAGCTGGAGTGCAGTGGTGCTATCTCG 4070
Query 20 GCTCACTGCAACCTCCATCTCCCAGGTTCAAGCGATTCTCGTGCCTCGGCCTCCTGAGTAGCTGGGATTACAGG 93
||||||||.|||||||..||||..||||||||||||||||.||||||..|||||||||||||||||||||||||
Sbjct 4071 GCTCACTGTAACCTCCGCCTCCTGGGTTCAAGCGATTCTCCTGCCTCAACCTCCTGAGTAGCTGGGATTACAGG 4144
Query 94 CGTGTGCCACTACACTCAACTAA-TTTTTGTATTTTTAGGAGAGACGGGGTTTCACCCTGTTGGCCAGGCTGGT 166
|....|||||.||.|.||.|||| |||||||||||||||.|||||||||||||||||.|||||||||.||||||
Sbjct 4145 CACCCGCCACCACGCCCAGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAAGCTGGT 4218
Query 167 CTCGAACTCCTGACCTCAAG------------------------------------------------------ 186
||||||||||||||||||.|
Sbjct 4219 CTCGAACTCCTGACCTCATGATTTGCCTGCCTCAGCCTACAAAAGTGCTGGGATTACAGGCGTGAGCCACCGTG 4292
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4293 CCCAGCCCCCAAATAACTCTTGAACTGGAAAATAACTCTTTAGCTATATACTGGCAGAATATTTGAACAACTCT 4366
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4367 AGCAAGAAATGTCAGTTTAGGGATGCCTCCTCTAAATGGGGGCTTAGAATATAACATTTTGCAGGAAGTCCTTT 4440
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4441 CTGATACATAGCTGACTAGATGAAGGACCAGATTAACAAGTTCATGAGTTGTAAATATAAAAGTTGTGTACCAC 4514
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4515 GATAAAAAAGAAAAAGAAGTATGGCTGCACTGTTGATGGCTGGTCAAACAGCCCCCAAGAATCCTGGGGTGACT 4588
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4589 CCAATACTGCCACCTTTTCTCTGTGGGTGCAGTTGCCTGCGGATGTGTGTGCACATCTGTGCCTCGGTATGCAC 4662
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4663 ACTCGAGATGCCCGCTCTCATAGACGGTGCAGAGCGTCACTGCATTCCTATCTGATTAATGTGACCTTAGTGTT 4736
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4737 GTAGATACACTGTGTCACTTTCATCCTCCCTCCTCCCCACAAAAGATGCCACGAGAACTCGTGAACTGTGATAA 4810
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4811 GCAATGAACAGAATAACTGTTGAAGAAGCACCTCATGAACCTCCCCAGAGAAACGGGATGGAGGAGCACCCAGG 4884
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4885 GTGCTCTTGCTCTCTTGCCTGCGCTGCCATTTCCTTCCAGCCTGGGTTTCTAGCTCTTTGGGGAGATTCCCCGT 4958
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4959 TTTGTGGAATGCTTTCTGTGTTTCCTACTTCTGGATGCCTAAGGAGTGGCCAGTCATACTCCTGGCTGACCACT 5032
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5033 GCCAGGCACCGTGGTTTTCCTCACTGAACTCAAGGAGTCACCCTCCGTGGGGAGGCCACACTCACAGCTCCAGG 5106
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5107 CCTGCCATTTAGCCCTTGGGGCTTGGCTGTAAAGTTGCCCAAGAGGATTACAGGAGCTGCCAGCCAAGTTTAAT 5180
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5181 TTGGCCACCTTAGAGAACTGCAGCAAGGCCCTATCAGCTTCCCATTAGACAAACAACTGCATTTAAATTAAATA 5254
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5255 AAGTTTGCACCTCTAGGGAGTGCTGACCTGAAAATAAGAACCTTCTGTCTGTGATTATAGAGTACACTTGCTTT 5328
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5329 TATTAATTGCTGATTCTTAGTTTACAAAAAAAAAAATTAGAAAAGCATTACCATTTACTTTCCAAGGGGCAAGA 5402
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5403 GATTCTCTACAATACCCTTCCCCCAACCCTCTCCTCAAATTTCCAAATCCTAAATACTTTGAAGAAATTTGTGT 5476
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5477 GACTGTTTAAAATTGAGTATTTCCTTCTAACTATTGTCTTTTGAAAAGGGATGGTTCACCAGGCCAGTGATACT 5550
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5551 CTATGGACTGCATTTTGGGACCTCTACCCCAGCAAGGATACAGGTTCCTGGGGTCTTGAAGATGGGAAAAGTTG 5624
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5625 TCTCAGAATTTACCCAAATGTCGTTCTCACCATAAAAGATATACTTGTAGAAATGAGAAGCTTCAGTATAACTC 5698
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5699 AAAACACTGGACGCAGCAATAACTATAAACATTTTAATTTCAAAAACAAAGGTGTGTGCGATGTTGTGTGCACA 5772
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5773 GTAAGGGTTGCGGGGCTTGGAGAACAAGCACGCGTCCCTGTGAAGCCCGCAGGGTGCTGGCGGCCCACCAATCG 5846
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5847 CCTGGACTACAGTGAGGAGCATTGTGTGACTCCGCGGTGGATTTCCATGCACCGAATGGACTCAGTTTCTAAAC 5920
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5921 TCACATCCTAACGTATCCTGGCTTTTCACAGAATACTGGAGACATGACTGCATGCATGATCACGGTTCTTGTTG 5994
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5995 TGAAGCTGCCACCATGTTACGCTTAACAGCTGCATAAATATTATAAAGAAATAGGGTTTTCTTGACACTTAGAT 6068
Query 187 -------------------------------------------------------------------------- 186
Sbjct 6069 TTAACCTTAATGCATCTGCCCAGCTGATGGTATCAGACGTGCTGCTGTTCATTTCTTTTTCATGGTAACAGTAA 6142
Query 187 ----------------------- 186
Sbjct 6143 TGTATAAAGTGCCGATGATGTAA 6165
