Nucleotide Global Alignment
Description
- Query:
- TRCN0000473708
- Subject:
- NR_147501.1
- Aligned Length:
- 4394
- Identities:
- 159
- Gaps:
- 4213
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGCGCGCTATGGACCCCGCCTCGCGGAGACGCCTGGCTCGGGCCTTGTCCCCAGTGAGCGGCTGGAGCGGCCGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGGGTCGCAGAGCCTCCGGGACCCCGAGGAAGGGCGCCCCTCGGAGTTGCCCGAGGCCGGGCCCGGCGTCCACT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CGCCACTCGCCTCGCCCCTCCCCGGCCCCGCACCGCCCTCCACCCCGCCTCCTTCGGGTTCCTTCTGCGTCCGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CAGAGCCTGCGCGCCTCCCCCGGACGGCCACGGACTCGCAGCCTCGGCGAGGACGCTGCCTGCGTCCCGACTGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTGGACCTCCCCGCGTGGCTCCCGGCGAAGCCCAGCAGCCGGAGGGTGCCAGGTCCGCCTGACGCGCCCCTCCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CACGGGAAGAACGGGGCGGGGGTCCAGGAGGGACGTAAGCCGGGCTCCCCCGGCGTGTTGATCCGAACCCGCGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGGAAAACTTGCGCAAACCAAAGGAGGGAAGAGTCAGGCAGCCCCCAGCCCCCCAGGGAGGCCCAGGTGAAAAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CAGACGCCGGCCTCGCCTCTCCCGGTGCGGATGATCCCGGCACTCCCACCCCCGCCCCTGCTGCCCCGAGTTCG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCTCCCTCAGCCCCACATCCTCTCTGGTCATCTAAGTGGACTGCAGCTGCTCAGGGAGCATGTCGCGAAGGATA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GGGAAGGACAGGGGGTCTGCTTCCCCAGCCGCCCTCCAGACCCCCAGGGCTGGTAGGGGCCGGCAACCCTATGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CCCAACCTGGCCTGCTGCAGGTGAGGGGGGCACACCAGGGTAACACAGGAGCAGGAGGGGGAGAAAGCCTGGCT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGAGCATCCACCTCATAGGCACCTTCCTTGTGTCCAGGGTGCAGATGCCAGGGCTCTGAGGCCCTGAGGTCCTG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TCTGGGGCGAGGGGGCTTCCTCCATCCACTGCATCCACTGCCCGGCTGAGTCTAGAGGCCACTGAGCAAGCAGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CCCTCCAAAGCCAGGCACACTCAGGCCCTCACATGGTCACGGTGCTTATGCTCTGGGCCAGCCTGGATTGCTCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TCCCTAGCTGAGATTGGGATTCACAGGGTCTTCCAGTTCCCCCTTTTCTTTCTCTACTGATTGAGAAACACAGA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GTCCTTTGATTGCTCTGGGACCTGGCCATTGCGTGTTCCCTGCAGCCTTGAACCCAGTTCAATGGGGCCGGGCA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CATTCCCTGATAAAGCTGTTTAGGTTGCTTGAAAACACAATCAACCCTATTGCTAAACACGTAGAAACTGGCCC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TGCCCTGAGTCCAATCCCTTAAACTCTCATCTAAGCTCCATAGCCAGAGTCCCTTGCTGCAAATGTACCTGGGT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GGAGCATCCCTTGCCTCATCATCGATCCCAAGAAAGCTGAAGCTCCATGTGAAAATTTCCGGAAGAAATGCTCT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GGACTGATCACCCTGGCGTTTAGAGCTTCTTTCCTTGGAATCCCAACCAATTCCATCGCGGGACTGTTTGGGGA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGTCTTTTGAGGCAACTCCCTTGCTGCCACTTTTGGGGCAACTCTAGCCTCCTCATATTTGGCCAGATAGAACA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GTTCCAAGCTGTAAATGTTTCCAGGAAAAAATCTCAACTACAAAGACACTTTCAAGGTGCTGCATTTCCAACAG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CACTCTCCGTATCCGAGTGGACAGCCCAGAGCAATGGTGCTTCCAATCCACAGAGCCCCTCCACAGGTCCCTTG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CCATCTGCAGACACCCACATCTCAAGACGGGGTTTCTCCATGTTGAGGCTGGTCTCGAACTCCTGACCTCAGGT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GATCTGCCTGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAACCACCGCGCCCGGCCTAGGATTTCCTC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CTTTGACGATGAATAGTTCTCCACTGTAGTCTCACTCTTTCTCCCAGGCTGGAGTGAAGTGGCGTGCTCTCAGC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TCACTGCAACCTCCACTCGCCGCTCCACTCCCTGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GATTACAGTCCGGCTCTGTCATCCAGGCTGGAGTGCGATGGTGCCATCTCGGCTCACTGCAACCTCCGACGCCC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGAACTGCAGCCAGAGACCTCCACGGCCGGCAAC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GCCCCTGCGCAAGGCCTCACGGCTCCAGGCTGTTGGAGGTACCTGCCCACTCAACCTGGGCTGGCTGTTGGAGG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TACCTGCCCACTCAACCTGGCGGGCTGTGCGTGGCTTGTGCTTTGGGCTGGATCCCACGCTCGCCATGGGATCT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GCACTCGGACTGCAGCTGGGCCGGGCATGCCATGACCTGCTTCCACCTTGGGTGCTGACGTCTGGATGAGAGGA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 ACATGGTGGCGCCTGAAAAATCTGGAGACACCAGAAACCCTGGATCCCCAAAGGAAGTGTTATTCCCGCTGTCC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GTGCTGTGGGTGTGAAGATGTGTGCTGCACATCCCAGTTTCCAGCACAGGACAAAGACTCAGAGAGGCACCTGC 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 CAGGAGTCTCAGGTGATGGAACCCAGTGGCGGGCATGTGGGCAGCTGCCCCAGGTGGAAGGGATCGTGGCACAG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CTCTTGGTTCCCCAGGCTGGCCCTGACCTTCGTGCTTTCCTGCCCATGGCCCAGACTTCCGAGCTCCATGTTGG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 GGATGCTCAGGGACAACCCTTCAGCCTCCCCCACCATGTCCCGGCTACTGCCCAGGATTCTTGTTCTCTGGAGG 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 GTGGATCCAGCCCTCCCCATCTTGGTGCCCTACCAGGGCCAGGCTTCCCATGGCTCTTTCTGCAGCCCCTGGCA 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 CAGACTGTGGGGCGCACAGCCCGGGGAGCAGTGGGCCTTGGAGGGGCCAGGTCTGCATGTTCCCACCCCCATCA 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 TGGAGTTTGACACACCAGTGGGCAGGTAACTCAATCCCCCCTCACCTTCTCTTCATCTGTTAGGGGTGACAGGG 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 TGCTCCCCGTGGGGCCAAGAGGATGCAGCACCCCCACCGGCTACCCTTCCGGCCACACCCTTCTCTCCTGGCCC 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 ACCTTCTGAGCTGGCAGGGCTTCCTTCCTGGCTTCTGCTGGGCAGTGTATTAGGGTCCTCTAGAGAGACAAAAC 3108
Query 1 -----------------------------------------------------------------------ATG 3
.||
Sbjct 3109 CAATAATGGAGTTTAGGAGAGGGGATTTTTATTTGTTTGAGACAGAGTCTTGCCCTGTCACCCAGGCTGGAGTG 3182
Query 4 CAGTGGCGCCATCTCAGCTCACTGCAACCTCCATCTCCCAGGTTCAAGCGATTCTCGTGCCTCGGCCTCCTGAG 77
|||||||.|.|||||.|||||||||||||||.|.||||||||||.|||.|||||||.|||.||.||||||.|||
Sbjct 3183 CAGTGGCTCGATCTCGGCTCACTGCAACCTCTACCTCCCAGGTTGAAGTGATTCTCCTGCTTCAGCCTCCCGAG 3256
Query 78 TAGCTGGGATTACAGGC-----GTGTGCCACTACACTCAACTAATTTTTGTATTTTTAGGAGAGAC-GGGGTTT 145
||||||||||||||||| | |||.||||.||.|||.||||||||.||||||.|||||| |||||.|
Sbjct 3257 TAGCTGGGATTACAGGCACCCAG-----CACCACACCCAGCTACTTTTTGTACTTTTAGTAGAGACGGGGGTCT 3325
Query 146 CACCCTGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG--------------------------------- 186
||||.||||||||||||||||||.|||||||||||||||.|
Sbjct 3326 CACCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCCACCTACCTCTGCCTCCCAAAATGCTGA 3399
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3400 GATTACAGGGGAGAGCTACCGCGCCCGGCCAGGAGAGGGGATTTATTAGGCGAACTGGCCCACACACTTATGGA 3473
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3474 GGCTGAGAAGTCCTCCCATAGGCTGTCTGCAAGCTGGAGACCTAGAGAAGCTGTAAGTGAGGCTCAGTCCAGGT 3547
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3548 AAGAAGGTGGTTGAACCAAGGAAGCCAGTGGTGTAACTCTCATTCTGAGGCTGACTGGCCGAGAGCCCTGGGAG 3621
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3622 GCCTCTGTGGCAAGCCTGAGTCCAAAGGCCGAAGAACCTGGAGTCCTGATGTCCAAGGGCAGGAGATGGGTGTC 3695
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3696 TCCCTCCAGAAAAGAGAATTTGCTTGTCTTCTCCCTTTGTGTTCCATCTGGGTCCCCAACCAAGTGGATGTGCC 3769
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3770 TGCCCACGCTGAGGGCAGATCTTCACTGAGTCCACTGAAAACATCCTCACACACTCAGAAACAATGCTTCGCCA 3843
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3844 GCTGCCAAGTACAGTGTGTGTGCCTTAGTCCCAGCTACTCAGGAGGCTAAGGTGGGAGAAACGCTTGAGCCTGG 3917
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3918 GAGCTGGAGGCTGCAGTAAGCCATGATTGTGCCATTGCACTCCAGGCTGGCTGACAGAGAGATCCTGCCTCAAA 3991
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3992 AAAAGAGATAGATAGATAGATAGATAGATAGAGCTCCACCAGCCATCTAGGCTTTTTTTTTTTAAACAGGGTGT 4065
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4066 CACTCTGTCAACCAGGTTGGAGTGCCGTGGTGCTATCATAGCTCACTGCAGCCTTGACTTCCCAGGCTCAACCC 4139
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4140 ATCCTCCCACCTCAGCCTCCTGAGTAGCTGGGACTACAGCGTACAGGCACAGACCACGATACCTGACTTATTTT 4213
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4214 TAAATTTTTTGTAGAGAAGTTTCACCATGTTGCCCAAGCTGGTCTCAAACTCCTGGGCTTAAGCAAACCTCCCA 4287
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4288 CCTCAGCCTCCCAAAGTGATGGGATTACAGGCAGGAGACATGGCAGCCAGCTAAGGCTCCCTGTACCCTGTTAG 4361
Query 187 ---------------------------- 186
Sbjct 4362 TCGGCTTTACAGCACCTGGAATTGACCG 4389
