Nucleotide Global Alignment

Description

Query:
TRCN0000473708
Subject:
XR_001737206.2
Aligned Length:
4591
Identities:
161
Gaps:
4407

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CTGCATGTGAGGATTAGGGAGCCCGGAAAGCCCGTTTCAACTTTTCAGTTCTGAGTCCCGAGTCACTACTCTGC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCTGTACCGTCTGGAGACTTAATGGGAGCGAGTGCGAGGCAGTGAATTCTCCGCTCTCTAGTTTTCCAATTCTA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CGGTCTTCAAAAAAAGGTTTGCTCTTGAGCTGCGCCTAAACTGAGAAGCGGGAAAGGCTAGCCCCGCTAAAGGC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GGACGAGTGGCAGAAGCGGAAACCCAGTTAAGAGAAGGGACTGCCCTGGAGAGCACAGAAAGCGAAGGTTAGCG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GGGGAAAGCGGCGCCCCTCCGAGGAAACCGACACCGCCCCGCCACGCCAAGGCAATGGGCGCCACCACGCAGCG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CCGGGAACGCGCGCCGACGCCCCGCGCTCCGCCGGCGTCCGCCCGTCCCCGCGCGCCCCCTCGCACCCCACGCG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CGGGAGGCGGGGCCGGCGGGGGCGCGCGCGGGGCCGCGGGTAGGGGGGCGGGGCGGCAGAGCTCGGCGGCTGGG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  ACTGGAGGACAGCGGTGGCGGAGGCGACTAGCGGCGGCGGGAGCGGCGCCGAGAGGCCGTGCGGGACGCGGGCG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CCAGGACCGGCCGAACGCAGAGGTTGATTCTTCACCACACTGAAACCATTAGGAAAAATCCTTGTGGTTAACAG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CAGAGGCTTCAGAGTGTAACCTGTACTCGGGCCTAGAAATTATTTAAAATGGCGACTGATACGTCTCAAGGTGA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  ACTCGTCCATCCTAAGGCACTCCCACTTATAGTAGGAGCTCAGCTGATCCACGCGGACAAGTTAGGTGAGAAGG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TAGAAGATAGCACCATGCCGATTCGTCGAACTGTGAATTCTACCCGGGAAACTCCTCCCAAAAGCAAGCTTGCT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GAAGGGGAGGAAGAAAAGCCAGAACCAGACATAAGTTCAGAGGAATCTGTCTCCACTGTAGAAGAACAAGAGAA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  TGAAACTCCACCTGCTACTTCGAGTGAGGCAGAGCAGCCAAAGGGGGAACCTGAGAATGAAGAGAAGGAAGAAA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  ATAAGTCTTCTGAGGAAACCAAAAAGGATGAGAAAGATCAGTCTAAAGAAAAGGAGAAGAAAGTGAAAAAAACA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  ATTCCTTCCTGGGCTACCCTTTCTGCCAGCCAGCTAGCCAGGGCCCAGAAACAAACACCGATGGCTTCTTCCCC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  ACGTCCCAAGATGGATGCAATCTTAACTGAGGCCATTAAGGCATGCTTCCAGAAGAGTGGTGCATCAGTGGTTG  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  CTATTCGAAAATACATCATCCATAAGTATCCTTCTCTGGAGCTGGAGAGAAGGGGTTATCTCCTTAAACAAGCA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  CTGAAAAGAGAATTAAATAGAGGAGTCATCAAACAGGTTAAAGGAAAAGGTGCTTCTGGAAGTTTTGTTGTGGT  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TCAGAAATCAAGAAAAACACCTCAGAAATCCAGAAACAGAAAGAATAGGAGCTCTGCAGTGGATCCAGAACCAC  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  AAGTAAAATTGGAGGATGTCCTCCCACTGGCCTTTACTCGCCTTTGTGAACCTAAAGAAGCTTCCTACAGTCTC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  ATCAGGAAATATGTGTCTCAGTATTATCCTAAGCTTAGAGTGGACATCAGGCCTCAGCTGTTGAAGAACGCTCT  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  GCAGAGAGCAGTAGAGAGGGGCCAGTTAGAACAGATAACTGGCAAAGGTGCTTCGGGGACATTCCAGGAACTCC  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  GACCCACCTGGTGCAGAGGAGTCTTGTCTTGACCTGCTTTGGGAGAGTGTTGTCTTGATGCTTTTCTCTTCCTC  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  CTTGGAAAACAGCTGAAGAAATCAGGGGAGAAACCCCTGCTTGGTGGAAGCCTGATGGAATATGCAATCTTGTC  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  TGCCATTGCTGCCATGAATGAGCCGAAGACCTGCTCTACCACTGCTCTGAAGAAGTATGTCCTAGAGAATCACC  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  CAGGAACCAATTCTAACTATCAAATGCATTTGCTGAAAAAAACCCTGCAGAAATGCGAAAAGAATGGGTGGATG  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  GAACAGATCTCTGGGAAAGGGTTCAGTGGCACCTTCCAGCTCTGTTTTCCCTATTATCCCAGCCCAGGAGTTCT  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  GTTTCCGAAGAAAGAGCCAGATGATTCTAGAGATGAGGATGAAGATGAAGATGAGTCATCAGAAGAAGACTCTG  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  AGGATGAAGAGCCGCCACCTAAGAGAAGGTTGCAGAAGAAAACCCCAGCCAAGTCCCCAGGGAAGGCCGCATCT  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  GTGAAGCAGAGAGGGTCCAAACCTGCACCTAAAGTCTCAGCTGCCCAGCGGGGGAAAGCTAGGCCCTTGCCTAA  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  GAAAGCACCTCCTAAGGCCAAAACGCCTGCCAAGAAGACCAGACCCTCATCCACAGTCATCAAGAAACCTAGTG  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  GTGGCTCCTCAAAGAAGCCTGCAACCAGTGCAAGAAAGGAAGTAAAATTGCCGGGCAAGGGCAAATCCACCATG  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  AAGAAGTCTTTCAGAGTGAAAAAGTAAATTTTATAGGAAAAAAGGGTATCATGATGAAATTCAAAATCTTATTT  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  TCTAAGGTCAGTGTGCATTTGTTTAGTTTTGATGCTTTTCAAATTACATTATTTTCCTCCCCTATGAACATTGT  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  GGGGAGGGACTCTAAATAAACCAGTTTAGGCATTTGCTAGCTTTAGGTGCTTTTATTGGTGCCTGCCCTTTTCC  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  TTGTTCATTTTAATTTCTGCAATAATCCTGGACTTTCCTAAACTATGTAATGTATACTTGTCCTTTTTCTCTGC  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  CTCCCCCAACCCCCTGTTGTTTTTATGGTCAGCTTTGCCTTTTTTTTTTCTTCCAATTTTATCTAAACAGTTGC  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  AGAGATTTTTATATTTGTAGAAAGCATCAAGAACGGTATGCCAGTCAGGTCCTGGAAGTAAAATGGAGGCACAA  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  TATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTATAGCTGTAATAATTAATCTTATTTAT  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  AAAAGCCACTCCACTAACCTTTTCTCTCCAACTGTAAACACAGAGACAGCTTTGGGAATAAGCCAAAAACAGGG  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  TGATCTCATTAGATTTTGAAGATATATGACTCCTTTGGGCTACATTTCATATTGATCAATTTCTAGGTATTTTT  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  CACTGGCCCAAAGTATTGCATTCCCTTAACAGCAAGCACAAGTTCTCTATATCACTTGTTTTTTGTTGTTGTTG  3182

Query    1  ------------------------------------------------ATGCAGTGGCGCCATCTCAGCTCACT  26
                                                            .||||||||.||.|||||||||||||
Sbjct 3183  TTGTTGTCGTCGTTGTTTTGAGACGGAGTCTTGCTCAGGTGCCCCGGAGTGCAGTGGTGCAATCTCAGCTCACT  3256

Query   27  GCAACCTCCATCTCCCAGGTTCAAGCGATTCTCGTGCCTCGGCCTCCTGAGTAGCTGGGATTACAGGCGTGTGC  100
            ||||||||||.||||..|||||||||.||||||.|||.||.||||||.|||||||||||||||||||.||||.|
Sbjct 3257  GCAACCTCCACCTCCTGGGTTCAAGCAATTCTCCTGCTTCAGCCTCCCGAGTAGCTGGGATTACAGGTGTGTAC  3330

Query  101  CACTACAC---TCAACTAATTTTTGTATTTTTAGGAGAGACGGGGTTTCACCCTGTTGGCCAGGCTGGTCTCGA  171
            |||.||.|   .|||.|  |||||||||||||||.|||||.||||||||.||.||||||.||||||||||||||
Sbjct 3331  CACCACGCCTGGCAATT--TTTTTGTATTTTTAGTAGAGATGGGGTTTCGCCGTGTTGGTCAGGCTGGTCTCGA  3402

Query  172  ACTCCTGACCTCAAG-----------------------------------------------------------  186
            |||||||||||||.|                                                           
Sbjct 3403  ACTCCTGACCTCAGGTGATCCGCCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGAGTGAGCCACTGTGCCT  3476

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3477  GGCCTATCCCACTTGGTTTTTGACTGAAGGGGAAGTGTAGAAATATATTGATTTGTGATTTCTGGTGTCACCTG  3550

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3551  TGTTACCAAAAATCAAAACAAATCTTTTTTATTTTTTATTATTATTATTATTTTTGAGACAGAGTCTCGCTCTG  3624

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3625  TCGCCCAGTGTGGAGTGCAGTGGTGTGATCTTGGCTCACTGCAAACTCCGCCTCCCAGGTTCAAGCGATTCTCC  3698

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3699  CACCTCAGCCTCCTGAGTTGGGTCCTACAGGCGCACACGACCACGCCCAGCTAATTTTTTGTATTTTTAGTAGA  3772

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3773  GTTGGGGTTTCACCATGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCACTCACCTCAGCCTCCCAA  3846

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3847  AATCCTGGGGTTACAGATGTGAGCTACCACTCACGGCCCAAATCTTCTTGATCATATGTTTAAATATATTTTTT  3920

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3921  AATATTTGGAGCATGAGTTGTCACTTCTTGTTTGCCTTTTTTATAAGGAAATGTTGGAGAGTTACATCATTGCT  3994

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3995  AATGTAGAAATGTTAAGTGGAAAAATATACAGTTTGGTAAAATAAACTAGATTCTACATTTATTTGTGGGTTTT  4068

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 4069  TTTCCCCTCCTTTCTTTCCACAGCACTTTTGATATCAAGCAAGTGGCTTCCTTTTTGAGATATTAAAAAAAAAA  4142

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 4143  AGAAAAGGAAAAAAGTAAATGAAGCCCAACTACCTAACCCTTTCTTATTTGTATTTGTTTTAGTATTGTGAAGT  4216

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 4217  TGTGTTAAATAGTACTAGCTAGAAATACAAATTTCTGGTTATCATTTCTCTTCCCTGTGGCACTTGACATTTTA  4290

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 4291  ATTGTCTTAAAGTTTTTGAAGTACATCTTCTGGCCCCTTGAGTACTGCCAGAGGCAAAAGATGTTTGTTTCTTA  4364

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 4365  TTCATTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCTGGGAAATGGACTTGAGAAGATTG  4438

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 4439  GCTTGAATTAGATCATAATCATGTGTGATCCCATCATGAATTCATTGGAATTTGTGTTGCATGTAAGGCAATCT  4512

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 4513  TTCCTGTTGTAAATCTTCCTTTTTTAATGTACATATATTTTGAAAAATATGAATAAACATGAAATTTTAAAAGC  4586

Query  187  ---  186
               
Sbjct 4587  TGC  4589

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