Nucleotide Global Alignment
Description
- Query:
- TRCN0000473708
- Subject:
- XR_001737254.1
- Aligned Length:
- 6169
- Identities:
- 163
- Gaps:
- 5983
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATCTGGACGTGGTGAGCCGGACCGGGGGCAGGTGGCAAACTTCACGGCTGGGGGTCGGGGCTCCTGGGCTTCCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGCCACATCCTTCCAGCCCTCTCCTCCGGCCGCTGGACTGTCCCGGCTCCTGCGCCCTCCTTGTGGCGCGATAT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CGTGGGACGAGGCTCCGGGCCGGGACTGGGTGGCCCTCGGGAATCCGCAGCCAGTGGCCCCCCACCTCAAAGGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GACCAGCGCGGCCTCTCGAGCTGGCCTGGCCAGGAGTTGCCCTGCCCCGGCCGACCGGCCCCTTGGCATCTGAT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGCTTCGTTTTTCCCGGGCCGGCCGGGCGAGGGGCCCTCGCGGCGCTGGCCCCAGCAGCTGTCCTATCATTATC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCTCCAAACAGGCGGCCCGCGCCGGGCTGAGTCACCAGGAGGGAGCTGTGGCCGAGGACGCCGAGGCCTGGAGT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGGTGGTAGCCCCGAGCTGGGACGCTCCTCCCTCCACAATCTCCCCAGGTCTGCAGGGACCGAGGGCCTACACT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCCTCCTCCCACGCCGTGCTTAGGAACCCTTGCTGGCCTCAGAACACCAGCGCCCTCCCTCCGGTGCAGCCCTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CCTGGCCGGGGGCCCCTCCTCCACAGCCATGGTCTGGAAGAAACTGGGCTCCCGCAACTTCTCCAGCTGCCCCA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GTGGCTCCATCCAGTGGATATGGGATGTGTTGGGTGAATGTGCCCAGGACGGCTGGGACGAGGCCAGCGTGGGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CTGGGCTTGATCTCCATTCTCTGCTTTGCTGCATCTACCTTCCCCCAGTTCATCAAAGCCTACAAGACGGGCAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CATGGACCAGGCGCTGTCCCTGTGGTTCCTCCTGGGCTGGATTGGCGGAGACTCCTGCAACCTCATCGGCTCCT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TCCTTGCTGACCAGCTGCCCCTGCAGACCTACACGGCTGTGTATTATGTCTTGGCAGACCTGGTGATGCTGACG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CTGTACTTTTACTACAAGTTCAGGACGCGCCCCTCTCTGTTGTCTGCCCCCATCAACTCCGTGCTGTTGTTCCT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CATGGGGATGGCGTGCGCCACACCGCTGCTGAGTGCTGCTGGGCCCGTGGCTGCCCCTAGGGAAGCCTTCCGGG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GGCGGGCGCTCCTGTCCGTGGAGTCGGGCAGCAAGCCCTTCACCCGGCAGGAAGTCATTGGCTTCGTCATCGGC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TCCATCTCCAGCGTGTTGTACCTGCTTTCCCGGCTGCCTCAGATCCGCACCAACTCGTGCACACCTCCTGTGTG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CCAGGCACCCAGCTGGACCCTGGAGCCGTGAGTGAGCAAGAACAGCCATGAGTGCCCCAGAAGCTTACAGCCCA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GCGGGGCGCAGAGAGGACACAACGCTATCATCAAAGAATTACTTCATTGCAGTGGCACCAAGTGCTGCAGAGAA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AAACAACAAGAGCGTCTAGCCAGGGACCGTCCTGGTTAGAGGGGCAGCAAAGGCCCCTATAAGTCTCATTGAAC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CTGTGACTTGACAGAGTAGGAGAAGTCAGGCGAAGGCAGGAGAGGAATGTTCTAGGCTGTGCAGACGAGAGCTG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GAGTGTGGAGAGACACATGACTTGGTCAGACAAACCTGGGTTCAAATCCTGGCTCCTCCCCTGCTTCCTAGCTG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGTGACGCAGGGCACACAGTCAACCTCTCTGTGCTGCCGTGTCTTCACCTCAGTTAACAGCCACTGTCTCGTCA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GGATGTTGTGTAAGATGAGGTATCTGGAAACACTCCCCACAGGACCCCGTTTTCAGTGAGGGCTCAGAAAGTGT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TTGCTGAATGGCTGTAAAGAGCGTTACCTGGGTCTCATTTCGGAGCAAGTAAACATGGCCTTTGTTTTAATATT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TGTTAAGTCCCTGCCGGGCGCAGGGAGGGGTGAAAGTTTAGGCTCTTGTGCCCCAAAACGGCCCAGCCACCTGG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AAGCCTCCAGGACGCCACAGCTGAGAGCAAGCGAAGATCCTGGGCCAGGGTCAAGGGAGGCTGCCCACGGGAAG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GAGAAGTCAGTGCTAGGCTTGGAGACAGATGGAGCTTGGCTAGGGCTTGAGGAGCCGGGCAGAAGTTCTGAGTG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GAGGGCACAGCTAAGGTAGCGGCTGGGAGGTTATGGCTGGCCCTTCCCACCTGCAGCGTGGGGGTGGGAGGGAG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GGGAGAGGGAGGCAGCTCCCAGGAGTCGAAGGCCCCCAGGGGCAGGTCCAACCCAGTCTCTGCTCAGCTTGGCC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TTAACGGCGGCACCCCCAGATCTCCATCCAGTTCCTGGTGTACAGGCGCAGCACCGCCGCCTCGGAGCTTGAGC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CCCTCCTCCCCAGCTGACCAGAACCAGGCTGAGCGCAGGAGGACAGGCACCACCGGATGCCACACCAGGCAGGA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GGAGGTGTGGACAGTGATGGTACGGCGGCCCTGCATCAGCCTGCGGGTGGCCTCTGGATCCTCCGTGGACCGAA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CCGTCCCCCCAGGAACACACCTTCAGGGGCCACAGCCACAGCCTGCTGGACTCAGGACTGTCCTGTCAACTCCA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GACAACTGAATAAACAGGCCGGGTACAGTGGCTCGCACCTGTAATCCTAGCACTTTGGGAGGCCGAAGCGGGTG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GACCACTTGACGTCCGTAGTTCGAGACCAGCCTGGCCAACATGGTGAAACCCCATCTCTACTAAAAATACAAAA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 ATTAGCCAGGTGTGGTGGCACACATCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAACTGTTTGAACC 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TGGGAGACAGAGGTTGCGGTGAACCGAGATCGTGCCACTGTACTCCAGCCTGGGTGACAGAGTGAGACTCCGTC 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TCAAAAAAATAAAAAAGATAACCGAGGAAACGGTACCTCCCCATGAGACCTGCTTCTGTTGCTCCTTCCCCAAG 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GTGCTGAGGGATCGGGGCTGCTTTGGGGACCAGCGGTGGATGTGGATGGGGATTCAGGACGAGCTGAGCAGAGG 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 GGACCGCATCTGCCTGCAGCCCTGGCCCAGCCTCCTGGGGCCTCTGGTTTCTTTAGCCTGCTTCTCCGGGCCCT 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 TTCCTGACAGGCCCCACACCTTACTGTGGGGACATAGCAGGGAGAGTGACTCCCCACGGGGAGCCTGCCCCTCG 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 GTGTTCAGGAAGAAGCAGAATGGTTAAGGTTCTGTTGGATCTGGGTTCTCCATCGCAGTTCCTCAGTGCCTAGC 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 TTATCTCATCTGTGAAATGGACAGTACTGTCATTTCCTGTGTCCTTTCAAGGATTACATAAGATGCTGACATTA 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 TGGAGTTTAGCCCCAGATCTGGCGCATAGTAAGGGCTCAATAAAGGTTAGTTTTGAGGACTTTTAGTTGGAGAA 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 GAGGAGCAACCAGATCTTGGAGATCAGGGAGAGCCTCCTGGAGGAGGTGATAGGTCAGAAGGATGAGCGGGAGA 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 TATCACAGGGAAAGAGGGAGGATTGAAGGCAGGAGGAAGAAGTGGCGGGTACAGGAGCAAGGTGGGAGAGTGGA 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 GAGGAGGGCAGAGCTGAGCTCCGAGTGCTTCCTGGACCCGCAAACTCAGTGTTGTCCAGACCCTGTTTTATTTT 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 TAAAATTTTTTAGCCCAGGCCGGAGTACAGTGGTGCGATCATAGCTCACTGCAGCCTCGAACTCCTAGCTTCCA 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 GGGATCCTCCCACTCAGCCTCCCGAGGAGCTGGGACTACAGATGAGCACCACCATGCCTGGCTCCAGACCCTGT 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 TCTGATTCCACTTTCCTGGGGGTCATGACCCTCAGGTGCCTGGAGCACAGAGACGCCAGCTCCCCACCTTGTTG 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 GCCTGATCTCACCCCACACACCCAACCCTAGCTGTGGAAAACCAGAACCAGGGACTTGGGGTATCTGGTGGGGT 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 AGTCTTGGGGAGAGACGCTGCGTCCCAGAGTGGGCCTTGCCTTTAGGATCTCCCTTCCCAGCCCCGGAGAAGGG 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 AAACGGTGCCATGGCCATTCTGGTGCCGCAGATCCTTTGTGAGCACAGCCCTCCACTCAGCCTTTGCTGTGTCA 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 GACACCGGGGCTGTGGTGAACCAGCTCCAAGGCCCTGCCTTCCAGGAGAGGAGATGGTTACCATGACCAGAAGG 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 TAGAAATGTCAGGAAATGAGCAGATGAGACCAGCCCCAGGAGGGTCAATCAGGGAGGACTTCTCAGAGGAGTGG 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 CCTTTGAGCTGGATCTTGAAGGCAGAGGGGAGGGCAGTTCAGGAAAAGGGAGGGGCAGGTACAGAGGCCTGGAG 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 GTGGGTGTCTCGGGTGCTTCCAAGGTGGGGCTGCTTACAAGGAGCCTTGAAAGCCACACCAATGCCAAGGACAA 4292
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4293 GGTCCTGGGGCACACCCAGCAGCAGCCCAGCAGCAGGTGATGGGGTTTGGTCGGGTGAAGAGCCTTTTGCTAGA 4366
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4367 GAGAGGAGGCAAGGCACACCTCTGAGACCCAGGTGGGCAGAGAGGGCCAGTCTCCCCTGCCCTGTCCCCCTAGG 4440
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4441 GGACACCCACGGAGCCCAGGATGCCATCTGGCATGCAGCTGTTAGTTGCACACTTGCCATGTGCGGGCTGCGCC 4514
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4515 GCCTGCCATCAGTGCACGAGATCTCCCCGTCTTCACAGCCAGCTCTGAGATGGGGGAGTTTTTATTTTTTTTTG 4588
Query 1 --------------------------------ATGCAGTGGCGCCATCTCAGCTCACTGCAACCTCCATCTCCC 42
.||||.|||.||.||||||||||||||||||||||..|||||
Sbjct 4589 ACACAGAGTCTTGCTCTGCCGCCCAAGCTGGAGTGCAATGGTGCGATCTCAGCTCACTGCAACCTCCGCCTCCC 4662
Query 43 AGGTTCAAGCGATTCTCGTGCCTCGGCCTCCTGAGTAGCTGGGATTACAGGCGTGTGCCACTACACTCAACTAA 116
.|||||.||||||||||.||||||..|||||..||||||||||||||||||||..||||.|.||.||||.||||
Sbjct 4663 GGGTTCGAGCGATTCTCCTGCCTCAACCTCCCAAGTAGCTGGGATTACAGGCGCCTGCCGCCACGCTCAGCTAA 4736
Query 117 TTTTTGTATTTTTAGGAGAGACGGGGTTTCACCCTGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG---- 186
|||||||||||||||.|||||||||||||||||.|||||||||||||||||||||||||||.||||||.|
Sbjct 4737 TTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTTACCTCAGGTGAT 4810
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4811 CTGCTTGCCTCAGCCTCTCAAAGTGCTGGGATTACAGGTGTGCCACCGCGCCCGGCCAAGATGGGAGTATTTTT 4884
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4885 ATGGCCATTTTACAGATGGGAGAACAGTCTCAGCACAATTGAGCAGCTTGCCCAGCTAGGAGCAGCAGCAACAC 4958
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4959 GAGACCCTCCAGCTTTGGGAGCCACCCCACACCTGGCCAACGCTGGCGGCCCGTGTCCCCTTCCTCCATCCTTG 5032
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5033 CTGGGGGCCCATGGCTTGTGGCAGTTCAGCTTCACCCTCAGGAGTGGCCCGAACCCTGCTGGACCCAGGCTCCC 5106
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5107 TTCTCACCATCCTGAATAGCGACTTTGCTGAGCCTCTGGCCCTGCCGAGATTTCAGGATAAGTTACCCCCAGGC 5180
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5181 CCGAAGCCCCAGCTTGCCCTGGCCTGTGCCTGCCTCAGGTGCCAGCTAGATGTCTCGCTCCACCTGGGTCTGGG 5254
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5255 ACCTGGCTCCACACCAGTTACCTGGGACCAGTAGGTGCCCTTCCAGCCTGAAGATCTGGGGGCACAGTATAGCC 5328
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5329 ACATGAGCCCCAAGTGTGGTCCTGAACTGGGGCCGGGTGGGGAAGAGTGAGATGGGATAACATAGCCCCTGCTT 5402
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5403 GGAGGCCCTTCTCTGATGGGGTGACATAATCCCTTCCTCCTGGGAAACACCAGCTTTTGGGGTGATAGCACTTT 5476
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5477 CAGGCAGGAGCTATGGTTCCTTCCTCAGGAGGCCTCCAATCTGATGGGGAAGACATGGCCCCTCCCCCTGGGGA 5550
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5551 GTGCCCTGTGTGATGGAGGCGATACAGCCCCTACCTTCAGAGAGCACCTGGCCTGCAGCTCATCCAAACCTGAG 5624
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5625 TCTCCTCTCCCTTGGAGGCCTCATTCCAGCGCCCCAAGGAGGATTCAAACTGTTGGGGCTGGAAGAACTTGGTG 5698
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5699 GCCTGGGTCCCTGGAGCCCTGTTGAAGGAGCTGGTGACATTCTGATGCTGGAGGCAGGTGACGGGGAGCACAGA 5772
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5773 CTTTGTGTCCTGCACACTGAGCTCCAAGTGTGCCCCAGCCACTGAGCCTTGTGACTTGAGCAGATGTCCGAAGC 5846
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5847 CGTTTCTTCATCCCATGAGACCAACAACACTGTCTGCCTCAGAACATAGCCGTGATCAAGATGAGCACGGAGGC 5920
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5921 TCGTGTCCCAGCACCTGGCACACAGTAAGTGCCTGGTAAATAAACAATGGCTATATTTGCTTGTCATCAGGGGG 5994
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5995 CTTACCAATGCCTGGAACCTCCCCCAGGTTCCTCACAAAGAGAAGGGCCAAGGCCGGGTGCAGTGGTTCACGCC 6068
Query 187 -------------------------------------------------------------------------- 186
Sbjct 6069 TGTATTCCCAGCATTTTGGGAGGCTGAGGCAGGAGGATCACTTGAGCCAAGGAGTTCAAGACCAACTTGGGCAA 6142
Query 187 --------------------------- 186
Sbjct 6143 CATAGCAAGACCCCATCTCTACAAAAA 6169
