Nucleotide Global Alignment
Description
- Query:
- TRCN0000473708
- Subject:
- XR_001737361.2
- Aligned Length:
- 6290
- Identities:
- 162
- Gaps:
- 6104
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AAAGCAAGAACAGCACTGCTGGGCTGGAGACGGCGGGAGCCGCTGCTCTCCGGCTGAGGGAATCAGAGACAGCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCGTCCCTAGTGGAGCGCAGGGGAGGCAGAAGTCATGACAGGCGAGGTGGGTTCTGAGGTTCACCTAGAAATCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATGACCCAAACGTCATTTCACAAGAGGAAGCAGATAGTCCTTCAGATAGTGGACAGGGCAGCTATGAAACAATT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGACCCTTGAGTGAAGGAGATTCAGATGAAGAGATATTTGTAAGTAAGAAGTTGAAAAACAGGAAGGTTCTACA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGACAGTGATTCCGAAACAGAGGACACAAATGCCTCTCCAGAGAAAACTACCTATGACAGTGCCGAGGAGGAAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATAAAGAGAATTTATATGCTGGGAAAAATACAAAAATCAAAAGGATTTACAAAACTGTGGCAGACAGTGATGAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AGTTACATGGAAAAGTCTTTGTATCAGGAAAATCTTGAAGCGCAAGTGAAACCTTGCTTAGAGCTGAGTCTTCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GTCTGGAAACTCTACAGACTTTACCACTGACAGAAAGAGTTCCAAAAAGCACATACATGATAAAGAAGGAACTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CAGGAAAAGCAAAAGTAAAATCAAAAAGAAGACTTGAGAAAGAGGAGAGAAAAATGGAAAAAATTAGACAGCTA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AAAAAGAAGGAAACAAAAAACCAGGAAGATGATGTAGAACAGCCATTTAATGACAGTGGCTGTCTTCTTGTGGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TAAAGACCTTTTTGAAACTGGGTTGGAGGATGAAAATAACTCTCCATTGGAAGATGAAGAGTCATTAGAATCAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TAAGAGCAGCTGTAAAAAACAAAGTAAAAAAGCACAAGAAAAAAGAACCATCTTTGGAGAGTGGGGTCCATTCA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTTGAGGAAGGAAGTGAGTTATCAAAAGGAACCACGAGGAAGGAAAGAAAGGCAGCCAGATTAAGTAAAGAAGC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ATTAAAACAACTGCATAGTGAGACTCAGCGCCTTATTCGAGAGTCTGCACTGAACCTTCCATATCATATGCCTG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGAATAAAACCATTCATGATTTCTTCAAACGTAAACCCCGGCCCACTTGCCACGGAAATGCCATGGCACTATTG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AAGTCATCTAAATATCAGTCAAGCCATCACAAAGAAATCATAGACACTGCAAATACTACTGAAATGAACAGTGA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TCACCATAGTAAAGGTTCTGAGCAGACAACAGGTGCAGAAAATGAAGTGGAAACTAATGCACTCCCTGTAGTTT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CAAAGGAAACCCAGATCATTACTGGATCAGATGAGTCTTGCAGGAAGGATTTGGTAAAAAATGAAGAGCTAGAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ATTCAGGAGAAACAGAAGCAGAGTGACATTAGACCTTCACCTGGGGACAGCTCAGTGTTGCAACAGGAATCCAA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CTTCCTCGGGAACAATCACAGTGAGGAATGTCAGGTTGGAGGGCTTGTAGCATTTGAACCTCATGCCCTGGAGG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GTGAAGGCCCCCAAAATCCAGAAGAAACAGATGAGAAAGTGGAAGAGCCTGAGCAGCAAAATAAATCATCAGCA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GTTGGGCCACCTGAAAAAGTGAGACGGTTTACTCTGGATAGACTTAAGCAACTGGGAGTAGATGTTTCCATTAA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 ACCACGGCTAGGTGCTGATGAAGATTCCTTTGTGATACTTGAACCTGAAACCAACAGAGAACTGGAAGCCTTGA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AGCAGCGTTTCTGGAAGCATGCTAATCCAGCAGCCAAACCCAGGGCTGGTCAGACAGTGAATGTGAACGTCATA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GTGAAAGACATGGGCACTGATGGAAAGGAAGAGCTAAAAGCAGATGTGGTACCTGTGACTTTAGCACCTAAGAA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GTTGGATGGAGCAAGCCACACAAAACCAGGTGAAAAGCTTCAGGTGTTAAAAGCTAAACTGCAAGAAGCAATGA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AACTCCGAAGGTTTGAGGAGCGCCAGAAGCGCCAAGCACTGTTTAAATTAGATAATGAAGATGGGTTTGAGGAA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GAGGAGGAGGAAGAGGAAGAAATGACAGATGAGTCTGAGGAAGATGGAGAAGAGAAGGTAGAGAAAGAAGAGAA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AGAGGAAGAACTAGAGGAAGAGGAGGAGAAAGAAGAGGAGGAGGAAGAAGAAGGAAATCAGGAGACTGCAGAAT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TCCTTCTTAGTAGTGAAGAAATAGAAACAAAAGATGAAAAAGAAATGGATAAAGAAAATAATGATGGCAGTAGT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GAAATTGGCAAGGCAGTTGGCTTCCTCTCTGTTCCCAAGTCTCTCTCATCAGATTCTACTTTACTTCTGTTTAA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GGACAGCTCTTCCAAGATGGGTTACTTTCCTACTGAAGAAAAATCAGAAACAGATGAAAACTCAGGCAAGCAGC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 CTAGCAAACTGGATGAGGATGATTCATGTTCATTGCTAACAAAGGAGAGCAGCCACAATAGCAGCTTTGAGCTG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 ATTGGCTCCACGATTCCATCCTATCAGCCTTGCAACAGACAAACAGGCCGTGGGACCAGTTTTTTCCCTACAGC 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 AGGAGGATTCAGATCTCCTTCCCCTGGGCTATTTCGAGCCAGTTTGGTCAGCTCAGCTTCTAAGAGTTCAGGGA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 AACTGTCTGAGCCTTCACTTCCCATAGAGGATTCCCAGGATCTGTATAACGCCTCCCCAGAGCCTAAGACACTT 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TTCCTAGGAGCAGGAGACTTCCAGTTCTGTTTAGAAGATGACACTCAGAGCCAACTGTTGGATGCAGATGGGTT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 CTTAAATGTTAGAAACCACAGGAATCAGTACCAAGCTTTGAAGCCTCGATTGCCATTGGCCAGTATGGATGAGA 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 ATGCCATGGATGCCAACATGGATGAGCTGTTGGATTTGTGTACTGGAAAGTTCACATCTCAGGCTGAAAAACAT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 CTACCCAGGAAGAGTGACAAGAAAGAGAACATGGAGGAACTTCTGAACCTTTGTTCAGGAAAATTCACTTCTCA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 GGATGCCTCCACTCCAGCCTCATCAGAGTTAAATAAACAGGAGAAGGAGAGCAGCATGGGTGATCCAATGGAAG 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 AAGCACTTGCTCTTTGCTCAGGCTCTTTTCCCACAGACAAGGAAGAGGAAGACGAGGAGGAGGAATTTGGAGAC 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 TTTCGGCTTGTTTCAAATGATAATGAGTTTGATAGTGATGAGGATGAACACAGTGACTCTGGTAATGATCTGGC 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 ACTGGAAGACCATGAAGATGATGATGAAGAAGAACTCCTGAAGCGATCTGAGAAGTTGAAAAGGCAAATGAGGT 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 TGAGGAAATACCTGGAGGATGAGGCAGAGGTGTCAGGAAGTGATGTGGGAAGCGAAGATGAGTATGATGGGGAA 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 GAAATTGATGAATATGAAGAGGACGTAATTGATGAAGTACTTCCTTCTGATGAGGAACTGCAGAGTCAAATCAA 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 GAAAATACACATGAAAACTATGTTGGATGATGATAAGCGACAGCTACGTTTATACCAAGAGAGGTACCTTGCTG 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 ATGGGGATCTGCACAGCGATGGTCCTGGGCGAATGAGGAAGTTTCGATGGAAAAACATAGATGATGCTTCCCAG 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 ATGGACTTGTTCCACAGAGACTCTGATGATGATCAGACTGAAGAACAGCTTGATGAGTCAGAAGCCAGGTGGAG 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 GAAGGAGCGAATTGAACGAGAGCAGTGGCTTCGGGACATGGCACAGCAGGGGAAAATTACAGCTGAAGAAGAAG 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 AAGAAATTGGGGAGGACAGTCAGTTTATGATACTGGCCAAGAAAGTTACAGCCAAAGCACTGCAGAAGAATGGT 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 GAAGACAGGCTCACTGCTAAACCAGCCCAAAGCTGTGCTTCAGAAACTGGCTGCTCTCTCTGACCATAACCCCA 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 GTGCTCCTCGAAATTCAAGAAACTTTGTCTTTCATACACTTTCTCCTGTCAAGGCTGAGGCGGCAAAGGAATCG 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 TCTAAGTCTCAGGTAAAGAAAAGGGGTCCATCTTTCATGACTTCTCCTTCACCTAAGCACCTCAAAACAGATGA 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 TAGCACTTCAGGATTGACGCGAAGCATCTTCAAATATTTGGAGAGCTAACACCATCAAAGGTGCCAAAATCTAC 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 ATTGAGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCCTTCCTTCTTT 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 CATAATCAATGCAATAAGATTGCAGACAGAAATTCCAGTGATTTCTACTGCACAGCTCTGGACATCTCTTTTCC 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 TAGTATTATTCCCTGAATTGGCCACTGATTTCAATTCTGCAGTATTTACAACATCAACAACTCATGGAATACTT 4292
Query 1 ----------------------------------------------------------------ATGCAGTGGC 10
.|||||||||
Sbjct 4293 GGGTGAGGTTTCCTTTTTTTTTTTTTTTTTAAGATGGGAGTCTCACTCTGTTGCCCAGCTTGGAGTGCAGTGGC 4366
Query 11 GCCATCTCAGCTCACTGCAACCTCCATCTCCCAGGTTCAAGCGATTCTCGTGCCTCGGCCTCCTGAGTAGCTGG 84
|..|||||.||||||..|||.|||...||||||||||||||||||||||.|.|.||.||||||.||||||||||
Sbjct 4367 GTGATCTCGGCTCACCACAATCTCTGCCTCCCAGGTTCAAGCGATTCTCCTCCTTCAGCCTCCCGAGTAGCTGG 4440
Query 85 GATTACAGGCGTGTGCCACTACACTCAACTAATTTTTGTATTTTTAGGAGAGACGGGGTTTCACCCTGTTGGCC 158
||||||||||.|||||||.|||.|.||.|||||||||||||||||||.|||||||||||||||||.||||||||
Sbjct 4441 GATTACAGGCATGTGCCAATACGCCCAGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCC 4514
Query 159 AGGCTGGTCTCGAACTCCTGACCTCAAG---------------------------------------------- 186
||||||||||.||||||||||||||||.
Sbjct 4515 AGGCTGGTCTTGAACTCCTGACCTCAAATGATCCATCCACCTCGGCCCCACAAAGTGCTGGTCACATGCATGAG 4588
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4589 TCACTGCACCTGGCCTTGGGTTAGGTTTCACTTCCTCCATTAGACATTTGACATTTTATTGTAGCAGCTTTCTG 4662
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4663 GGTTAATATCTCTTTGTGATTGATAGAAGTGGTTGGAAGAGGAAGAGTAGGGAAAAGTGTGACATTACAGATTA 4736
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4737 AACAGTGAAAATCAGTACCATAATGACTCCTTTACACCCATGAGATACGTACCATGATGACCAGGGCTCGGTGA 4810
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4811 AAGAAAGATTTCTTTTTTTTTTTTTGAGATAGTCTCACTTTGTTGCCCAGTCTGGAGTGCAGTGGCGCAATCTC 4884
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4885 GGCTCACGGCAACCTCTGCCTCCCGGGTTCAAGTGATTCTCCTGTCTCAGCCTCCCAAGTAGCTGGGACTACAG 4958
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4959 GTGCATGCCACCACACCTGGCTAATTTTTGTATTTTTAGTGGAGACAGGGAGTCACCATGTTGGCCAGGCTGGT 5032
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5033 CTCGATCTCCTGACCTCAAGTGATCCAGCTGCCTCAGCCTCCCAAAGTGCTGAGATTACAGGCGTGAGCCACTG 5106
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5107 TGCCCAGCCAAAAGAACGATTTCTTAGATGGAGGACCTAGGAACCAACAGATGGGCTGCTGTATTACTCTTACC 5180
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5181 CCTTTCATTTTCCTGTATGCTTCTTCCCAAGGCAGCATCAAATTTTGAATTAATTTTTGCTGCTTAATAAGGAC 5254
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5255 TTAAACTGGTACCCAAGTCAGAAAGACTCTGCCTCTAATTTTCTGGGGCTTGGGGATGAAGATAAAGTGTTACA 5328
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5329 CCCAGTGTTTGTCCACCACAGTCTGTGGGGCAGAGAGACCCTTCCTGGGACTGAATTCTCAATTTGAAGCACTG 5402
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5403 TTGTTCAAAGATCTCCCTTCTGGGTCTGACAAGAAGAAACATAACCCTTATTTATTGCATTCTTCTGGCTTACA 5476
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5477 TACATTGCCCTCACTAATCAATGGACATTTCAGCATTTCATTACTAATTTTGAGAGAAGGCCACCATGGAATTT 5550
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5551 AATAAAAATATTATTGAAGAGAATTGCCATCATTCTCCATTTTCCCTGAACTACCACAAGCTTCTCAGAATTTT 5624
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5625 AGACAAATGTTTTTCCCCTCAGAACTGAGCATCAGTGCTGCTTTGGAAAAACATTCCATGTGAATACTGTGGTT 5698
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5699 TCAGTGTCAGGACCTGTACTTGGGCAGTTGGAAGAGAGTGTGCCAGTTTTTTACTGGGAGATGGGAACACCAAT 5772
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5773 TTAATTGATGCAATTAGGTTGTAGGTTTTTTACAGTTTTTCTTTTCTTTTCTTTTTCTTTTTCTTTTCTTTTCT 5846
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5847 TTTCTTTTTTTTTTTTTGAGACATAGGCTGGCTCTGTCACCTAGGCTGGAATACAATGGCATGATCTCGGCTTA 5920
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5921 CTGCAACCTCCGCCTCCTAGGTTCAAGCAATTCTGCCTCGGCCTCCCAAATAGCAGGGATTACAGGCACCTGCC 5994
Query 187 -------------------------------------------------------------------------- 186
Sbjct 5995 ACCACTCCCAGCTAATTTTTTGTATTTTTATTAGAGATGAGGTTTCGCCATGTTGGCCAGGCTGGTCTTGAACT 6068
Query 187 -------------------------------------------------------------------------- 186
Sbjct 6069 CCTGACCTGAGGTGATCCACCCGTCTCGGCCTCCCAAAGTGCTGGGATTATAGGCATGAGCCACCGCACCCGGC 6142
Query 187 -------------------------------------------------------------------------- 186
Sbjct 6143 CGGTTTTCTACAGTTTTCTAATACTCAAGATGTTGACTTTGACAATACTTATGTTTGTATACTTGTAATCTTAT 6216
Query 187 -------------------------------------------------------------------------- 186
Sbjct 6217 AATGGGGAAAATGTGTATAAAGATGTTTTAATATGTATGTAGTTTTTCAATAAATCTTAATGCCTTGAAGGGAA 6290
