Nucleotide Global Alignment

Description

Query:
TRCN0000473708
Subject:
XR_001743802.2
Aligned Length:
5116
Identities:
68
Gaps:
5041

Alignment

Query    1  ATGCAGTGGCGCCATCTCAGCTCACTGCAACCTCCATCTCCCAGGTTCAAGCGATTCTCGTGCCTCGGCCTCCT  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GAGTAGCTGGGATTACAGGCGTGTGCCACTACACTCAACTAA-TTTTTGTATTTTTAGGAGAGACGGGGTTTCA  147
                                                 .|||| |||||||||||||||.|||||||||||||||
Sbjct    1  -------------------------------------GCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCA  37

Query  148  CCCTGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG-----------------------------------  186
            ||.|.||||||||.|||||||.|||||||||||||||.|                                   
Sbjct   38  CCATATTGGCCAGACTGGTCTTGAACTCCTGACCTCAGGTAATCCACCTGCCTCAGCCTCCCAAAGTGCTGAGA  111

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct  112  TTACAGGCGTGAGCCACCGTGCCCGGCCTGAAGACACTTCTTTTGCAATGCATTTACCACTTTAGAAGTGGTTG  185

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct  186  CTTTCCTCTCAGAATAGGTGTGTTGGGGGAACACTCAGAATGGGAGGGCAAGCAGGGAGTCCACTCTGTGTGCA  259

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct  260  GGGTGCAAAGCAACTTCCACATCAACTTAATACCATCAGATTGCTCAGTAGTAGAGACATTTTATTGCTGTGAT  333

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct  334  CCCATTAACTCTGACATTGCACTGTTCTATTCTTGGACACTTTCTTACTATCGAAAGCCAGCAAAGCTTAACAG  407

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct  408  CTGCTGAGAACCACAAAATAAAAAGAAATAGCTTTGGTCTTGTTGGATTGAATTTTTCTTTTTTTGGCCTCTTT  481

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct  482  TTCCCTTTGGGCTTCAACTATTTCCTCTACCACAAGGGCTGACGTCAATGCTGTCACCAGGCACATGGACCAAC  555

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct  556  TGGGCTTGTCTGGGGACAGAGAGTCTGTCAAATCTTACCCACACAGGGTGGGAGGTCCCACCATGGTGCAGTGA  629

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct  630  GAACAGACCAATGGAACCAGCATTTCTCTGAAAAGACAAGCAGAGGGTTGACCCATCACATGCTCACTCCTCTG  703

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct  704  CCAGTATTGAAACTGTCCTCTCCTTTGTGTGCAGAAAGGAGGCCAGGACCAAAAGTCACCAACAAGTGCATTGG  777

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct  778  TCAGGGTTTTCTACCTATTCCATGAAACAAACTTTCAGCCAATTAAATGAAAAACCTTTTAGCACATGGTTAAC  851

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct  852  GTTAAATTCTCATTCAGGCCTTTGAAACTGACTGAGGTTTGGCCATTGCTTAAATTAGATGCCAAAGTTCTGTC  925

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct  926  TCGTCTTTTCCCAAGTGGCTGGAGACAGGTTTGTGACAATGTCCCAATTCCTCTATGACTGGAGGAGGGAGTGA  999

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1000  GGGTGCCCATGGGCTGTTTCCCATTCTCAGGAGGGAGGAGGGTGAGTCCCTGTGCTGACTAGGGGCTGGGAAAC  1073

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1074  TTGGTGACATGGTACAACCTCACTTGCCACAATTGCAGAGAAATGTGTTGGTGGCTGGCAGTCCAAGTGCCACT  1147

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1148  GAGTTTCTCTCTCATGCCACCTTGGCTTACGGGCCATGACTTGGCCACCTCTTAAATTCTTTCTAAAATAATCA  1221

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1222  GTATGATTATGCAAAGTTTATAAAAATCAGCAAAATTCAGACAAGGTAAAGGTAGAGAGATGAAACAGAGCTAC  1295

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1296  ATGTCTATGTATTAGAGAAGCTTTTGAGATTCATTATTTAGATTCCTAATAAGAAAAACTCTATGATGGAAGGA  1369

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1370  AGGGGAAATCTTCCTATAAGTTTAGTGCCTGCTGGACAAAGTCTTTGTATGTGTACTGCCAAGCAATAGATAGA  1443

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1444  ATCCCAGAACTAGAGGCTTTGAAAATACAGCCACATCTAACAGGCAAGGCCAAGCTTTGCTCTGCTCAGCACCT  1517

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1518  GCTGCCCTTCTTTCCAGGACATTCTTTCTCTTGCTCATCATGAGCCCCAGTTCCTGCCCTATGAGGAGCTACAT  1591

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1592  ATCCAGGCCTGATCTCACACATGCATCCTGACTTACTGACGTCTCTCTACAAGTTGACTACTCTTTTCCAAACT  1665

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1666  CACATGTCTAAAGTAGAATTATTTTCTCTGCCAATCTAGGTTCCGTTACCAGCTATCACGCTTCTTAGAATTGC  1739

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1740  CATCATTCTTCCAGCCTTCTAGGTGCAAATCCTTAGAGTCAGTCATCCTTGAATTTTCTCTCTCTTTCATCATT  1813

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1814  TGTAATCAGTCACCAAGCACTATTGAACATTGCTTGTCAAACCTTCTCTGCATGCTCCTTCCCTACACACCCCT  1887

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1888  TGTTATAACCCTATCCATGACTAACCCTCCCACCCAAAATACTCTTTGCTGGTTTCCCCACGACAGGAACTAAC  1961

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1962  TTCCGTGCCAGAATAAGCCACCTAAGACAACAGTTGGAGAGATCACCTTATCACATATGAGTAATGTGACTCTG  2035

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2036  AGAAAGTTATATAACATTTCTGAATCTCAGTTTTCCTCATCAATGAGAACAACACTCATATCACTGGGATACTA  2109

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2110  GGAAACAGACATATGTGTCAAATACTTGATAAAGCCCTCTCCCAAGATGCATGCTATGATTATTTAGGGCGATA  2183

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2184  TTATTTTGGCCACTGTTGCCCCCAAGTAATTTCTGGTTTCCAGTATGATTAACTAATCTGATTACATCACACAA  2257

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2258  TAGTCAAAGAATTAAGCAGCTGAACAATTGCAAAGAGCTTTTCCTCAGTGGAGACACCATTGCAAAGAGCAGTA  2331

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2332  AGGGGTGAACGATAACAGGCTGCATCCCACGGTAGTGGGTATCATATAATCTGGTCTTCAAAATGAACCTATCC  2405

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2406  TTTTTCCTCCAACCACCACTTCCCCTTTCTCTGTCATCACTGGCAATTTTCTCTCCTTTTTTTCCTCTTTCCTA  2479

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2480  ACCTTTTCTATACCTCTATTTCCATGAGACAGAAAATCTTATGTTGCCGTTTTAATGAGATCTCTGATTTTCTT  2553

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2554  TTTTTTTTTTTGAGATAGAAACACCCATTTATAATGCTTAATTATATCACCTTTGATATTATTCATTAGTTATT  2627

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2628  TCCTCTAGCAATGTGTTATATTCCAAACCACTGAAGTCAAGACTTAACCTTTTGTGACTGCTGCAGCTTAAGGT  2701

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2702  ACACATTAGTGTTCAATGAATATGTGATTGATTTATGAAGAGCATCACGCTTGGTCATTACTAACATACTTGAG  2775

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2776  TGATGTCTGGTATGTACTCACACGTGAATATTCTTCCTATAGTTTAACTTGTGTAAGTTTTAGCTTTTCAACTA  2849

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2850  AGTGGAAAACCATTTAAAGGCAAGCATCTATCCTCTTATCAGCATTCTATCAGTGCTAGCACACAGTAGGTGTC  2923

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2924  ATAGAAACTCACTACATTCCCTAAACATAATAACAATTGCTTATGGAGCACTTACTAAATGCCAGGCACAGGAA  2997

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2998  AGTCTGTAACTACTTGGCATGAAATAGATCTTTAATTATAACAACAGCTCTGTCATGTGGGTTTCATAATATCT  3071

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3072  AGTTATACAACAGTAAGTTGAGATCACACAGGTAGTAAATGGCAGAGCCAGGATTTAAACTCAGGCTTGCCTGA  3145

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3146  CTTCAAAGAATGTGTTCATAGCCCCTCTCTGTCCCTAACTCTCATACTTCCCACTGTTTACATATTCTACAAGC  3219

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3220  GACTCTACTGAAAGGGAGCCTAGTTTTGTCTTTCACTTTTAATACATTTTCATGGCAACTCATATTTTTAGTGA  3293

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3294  ATATTTGTTCTCTAGCTAAAGATGGATCATGTATTCCTTCTGAACCTTGCCTTGTTTTGTTTTGGCCATTGATA  3367

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3368  GTTATTCTAGGCATGGTCTCTTTGACAATGAATCTCCTCAAAAGACAACACAATAAATTATGAAAAGAAGAGAC  3441

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3442  TATAAATTATAAACTGAGTTAATCTGCATCTCTTAGGGAAGGAAGTTTTGGACTCTGGAAGAAGATCCTCTACA  3515

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3516  TTCTCATTTTAAAACTGTACTATCTCTCATATTACGGGTGAATTCTCAACAGGAAAGTTATTTGTGGTAGCAGG  3589

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3590  TTGTGTTTTCCAAAGATGGTCATAATGTTTCCCACCCCACATACTCTCCTGTAACCTTGACAATGTTCCATTAA  3663

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3664  GGAGTGTTCCCTCTGTGTTCTCTCCCTTCAATCCTGGGCAGGCTTTAATGATTGTCTTGACAAATATAGTACAG  3737

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3738  GTTGTTGTGTATCGCTAATCCCAAAATATCCAAAATCCAAAACACTTCTGGCCCCAAGCATTTTGGATAAGGGA  3811

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3812  TCCTCAACCTATGTGGTGGAAGTAAGCAGTGTGACTTCTGAATTAGGTAACAAATATGCTATGCGCTTCTACTT  3885

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3886  TGCTCTTGCAGAATGCTCATGCTTGGAACCCTATGTCCAAGTTGTAAGGAAGCCCAAGCAGCCCATAAAGAGGC  3959

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3960  CCACGTTAAGAAGAACCAGGACCCACAGTCTAAGTGAACTCTCAGCTAATAGCACCATTTTGCCAACCATGAGT  4033

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 4034  CAAACTGGCAGCTTCAAGGACCTTGGCTGAAATTGGTCCATTTGGATATGTGTGCTTGTTTCTGCAATGTCCTG  4107

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 4108  AATGACTGTGGGAAAGGGCTTCACAAGGCTTCATAAGACACCTGGATCTCATATCTGCTTCTGCATTCAATCTG  4181

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 4182  TTGCACCAAGTTGTTTTGACTGAAGGGTATGAAGAAAAACTGGCCTCATCCAAATATGCGGTTGGAAAAGGGTG  4255

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 4256  GAGTATTTTAACAGCCCTTCAAATAATTGGTCCCAGTGATCAAGCTTTGTCTCCAGCATCATTTTACCCTTTAT  4329

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 4330  TCTTGGAAGGGACACTGGAGGCGACTGATTCCAACCCCTCGACTTGAAAGTTGAAAGATGCAAAGCACAGAGCA  4403

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 4404  GGGGATGACATGCTCAAGGCCCCATCACCAGTCGGAGGCAGACCTGCATAGAACTTGGGACATAAATGTAGGCA  4477

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 4478  CACACAAAACCCAGAGACATTCCACCGACATTTAAAATCAAGAATCCTCCCTGATATAGTATGACCTTGTAAAT  4551

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 4552  GATGCAAAGGGTTTGAACAATTCAAAACAAACAAACAAACAAAAAAACAGGTCTAGGATAAGTTTTTTCAAAAT  4625

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 4626  CATCAAATATAAATTTCAACCCAATTTTTTAATTTCATAAAACCAAGGTTAAAAGAGGTTGAGTGATTAGTTAA  4699

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 4700  AAGTTATGGGCAAGTGATGGTAACGTCAAGCCTCTAATTCATATATTTGCCAAGCTCTAGCTTTGAATGATATT  4773

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 4774  GTAACTCGAAAGGAATAATGTTGTTCTTTTTAGAAAATAACATGGTCATGGTAGACCACTTGGAAAAATATACA  4847

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 4848  TAAACATAAGGACAAAGTGACCCATACATTAAAGATAATCACTGTTAATATTTTTATTAAATGAAAAGCATTAC  4921

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 4922  ATGTAACTTTACCTAAGTTTATCAGAAAAAAAGAATTAAAGAGGGTCGGTATGGTGGTTCACGCCTATAATCCC  4995

Query  187  ----------  186
                      
Sbjct 4996  AGCACTCTGG  5005

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