Nucleotide Global Alignment
Description
- Query:
- TRCN0000473708
- Subject:
- XR_001755092.1
- Aligned Length:
- 3489
- Identities:
- 163
- Gaps:
- 3306
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CAGGCGTGAGCCACCGCGGCCGGCCTGTCTGCACTCTTTATTCTTTAACTTTCGTTACAGTGTTACATACAGAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AAGTGCACAGAGCAGAAGGGGATGGCTAGCAAGTTACCACAACGCCTGGCAGAGAAGCAGAACTCTGGACATCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACGAGCCCTCCTGGCGCCCCGCCCTGCCCCCCCGGGGCTGCTCTGTTTTTCATCTGGCTTTCCTACCAGTGCGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAAACGGAAGGAGGACTTTTTCTGGAAAATCAGTGTCTGCGCTTCCCACCGGGCGGGTTGGACCTGAAGACACG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCCGTCCCGCGGAGAATACGCGACACCGTGACCGACACGCGGCAGTCCTGCCTTAGAAGCGCGGCCGGGCCGGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCGGGACCCGCAGCCTGGGGACCTTCCTCGCGCCCCAGAGGGGTCTGGGTGGAACGGGAAAATTAAAAATTAAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAAAAAAAAAAAAACGGAAAGGCAAGAAAGGAAGAAGTCCGCTGGAGAACTCCGTGCGAAGGCCCCACTCCTAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ACGTCCCCGGCCTCAAGGGGAGACGAGGAAGAGAGCGGCCCAACCTGGGCCTGGGAGTATCGTGACCCATGTGT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTAAAGAACTAAAACGTGGCGTTAAAAATAAGTGGACGGGACACCATCAGAACTGTTTTTTTTGTTTGTTTTGT 666
Query 1 -----------------------------------ATGCAGTGGCGCCATCTCAGCTCACTGCAACCTCCATCT 39
.||||.||||||.||||..|||||||||||||||||.||
Sbjct 667 TTTTAGATGGAGTCTCACTCTGTCGCCAGGCTGGAGTGCAATGGCGCGATCTGGGCTCACTGCAACCTCCACCT 740
Query 40 CCCAGGTTCAAGCGATTCTCGTGCCTCGG----------CCTCCTGAGTAGCTGGGATTACAGGCGTGTGCCAC 103
||..||||||||.|||||||.||||||.| |||||||.||||||||||||||||||..|||||||
Sbjct 741 CCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCTGCACCCTCCTGTGTAGCTGGGATTACAGGCACGTGCCAC 814
Query 104 TAC-ACT-CAACTAATTTTTGTATTTTTAGGAGAGACGGGGTTTCACCCTGTTGGCCAGGCTGGTCTCGAACTC 175
.|| .|| | |||||||||||||||||||.|||||.|||||||||||.||||||||||||||||||||||||.
Sbjct 815 CACGGCTGC--CTAATTTTTGTATTTTTAGCAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTG 886
Query 176 CTGACCTCAAG--------------------------------------------------------------- 186
|||||||| ||
Sbjct 887 CTGACCTC-AGTTGATCCACCCGCCACAGCCTCCCAAAGTTGGAATTAAAGGTGTGAGCCACCGCACCCTGCCA 959
Query 187 -------------------------------------------------------------------------- 186
Sbjct 960 CACTGTCAGAATTGAGGAGGCAGATATGAGAAACATCTTAGGAATAAAAAAGAATAAATGAATTTGAAAACAAT 1033
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1034 GAATAGGCTAAGCAGCAAATTAGATGCAAATACATATAAAATTAGCGAACTGGAAGATATATTTGAAGAAGTCA 1107
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1108 CCCAGAGTGCAACACAGACAAAGGGTGAAAAATAAGTTCTCTTTAGTGGTTAGCATTGTGATGGAGTAAAAAGG 1181
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1182 CCCCACGTGGCCTAACTGGGGCTCTAGGAGGAAAAAAAGTGGATTAAATGGGCCAAGGTAATAGGGAAGAGATG 1255
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1256 TGAATGGAAAGGCACCATTTCTCAGACTCTGAAGCTTCAGAGAATCTAAGCAGAGTGTGTTTGAAGAAAACCAC 1329
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1330 ATCTGGACACACCTGTTGTAACTGGAGATTCTCAAAGACAAAGATTATAAAAGCAACTGGAGAGAAGAATGAGT 1403
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1404 AACTGTTGAACGGCACTGAAACCAACACCTAAACAGCAATAGGGGAAGCCGTGAGAAGCAGAGGTCTCAAATAC 1477
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1478 CTGGGAGGAAACAGCTTTCAACAAGAACTGTTCATCCCATGATATACCTTTCAAGAATGAGAGTAAAACAAAAG 1551
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1552 CATTTGTAGTTAAACAAAAACTAAGACTTCCACTTTGAGCCACGACAGAATAACTGGTCCAGATTTACTCTCTC 1625
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1626 ACCTTAAACAACTAGAAAGAAGGACAAAATATATGCAAAAATGTCTTTTGAGACATGGGACAGCGGTCAGAATT 1699
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1700 GGGCAGCAGTTACTGAGAGAGGAGAAACTAATGAGGAGAGACCTTCCAGCCCCTGGCTACTGTCTGGAGAGGAG 1773
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1774 CTCCAGGCCAGAGCCTGAGAGGGGGTACCCAGATAAGGCGGGGTCTTGCTGCGGCAGAGACTGAGTTATAAGTT 1847
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1848 GGGGGAAGCCAAGGCAACCAGAATTTTCAGGGCTGAGTACAAGAGAAGAGGGAGCTACAGAGAGAGAAAGAGAT 1921
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1922 GGGGAAGGAGAGAAAGAGATGGGGGAGGAGAGAAAGAGATGGGGTGAGAGAAGGCGAGAGGGAGACCCACCCAG 1995
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1996 AGAACTGTGGCTGAGCACTGATCTACGCATGCCTATGAAGAAATTACCTGAGGGGAAAAGAACCACTAGAAAGG 2069
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2070 AGGAGGCAGAACATCCGGAGGAGCTCGAACAGGGCTGGGATTGTTCGTGTTCCCACAAGCCAGAGTGGAAAGAC 2143
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2144 CTCCTAATTCAAAGGGCATCGTGGAGGCTGCAGCAGGGTAGTGTGTCAGCAATGGGGCCAGATTAGCCCCAGGC 2217
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2218 TGAAGGACCCACACTAACGAGGCTTCTAAGCAATCCTCAAAAGGATTCCAACACAACCCAAGAATATTCAAAGT 2291
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2292 AATACCAAAAATTCAGCACCCACCCATGTACCTTTCACAATGTCTATACCATTCAATCAAAAACTATCACACAT 2365
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2366 AGAAGCAGGAAAATATGATTCATACCCAGGGTCAAAATCCATCAATAGAAACAGACCCAGAGAAGACAGATACA 2439
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2440 ATGGGATTTGTATACAAGAACAGTGAGGCAGTGCTAACTAGATTTCATATGCTCAAAAAGGTAGAAGAAGGCAT 2513
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2514 GGGCGTGATGAAGAGGTTCTTTTTCAATGAACATAAAACAATTGCCAACATTCCTTAACAGCATATAAAATAGT 2587
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2588 GGTACATCTTAAAAGTGGTGCTACCTTAAATTTTTGGTGAAATGTGGTAACAGCATCTATTACAACCTGCCTGG 2661
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2662 TGTTTATCCCCCTTGGAATGTAACCATTACTTTAATTTATTTATCATTTTAGAATGAAGTTGGGAGCAAGAGGG 2735
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2736 AGTGGACTCTCATTCACTGACTTACTCATTCTGTTATCACATGCGTACTGAAAATTCAGAGTAAAACCTCGTAC 2809
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2810 TGTGCAACCCAGAATTTACCAAGATGAGAATAATGAGATATATAAACCAATAACTCTACACAAAGTGCTGCAAG 2883
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2884 AGAAGATTAACATGAGACAGAAGGAGTTCAGAGGCGAGGAGAAGTCAAGGCTGGCCACACAGCAGAAGAGGAAC 2957
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2958 TTTGGCTGGGCTTGGATGATGGGGCATTTGGACAAGTGAAGCAGTGGAGAATTTCTTTGAGGGACCTGGGCCTC 3031
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3032 CACCAGCCCTTTGTATGAATTAGAAAGGGACTTTTTCTCTGTTGCCCAACACTGCAGGTGCACTACTTGGGAAG 3105
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3106 TGAACGGCACCTTTGAAATGAGGTGCTACTGAAACAAAAGCCTAAAACTGGGGAAATCATCTTAGGGATGGAAG 3179
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3180 TGTGGGCTAAGAGACCTCAATGAGACTGATAGTAAAGTCTCAAAGTTCAGTGAGGGAACACCTGGAAAGATGGA 3253
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3254 AAAGAGTGACTGCTGTCATGTAGCAGCAGAAACGTTAGTTAAAATATCCTTTGGGGAAACCAGGACACCAAAAA 3327
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3328 ATATACCACATGAGCTTGTGGGTTTGACTGAAGAGACTTTGAGGCAGACTGTCATAATTGGCAACTGCTTTCTT 3401
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3402 TTAGCTGTGTGTAATATAGATAAAATAATGAAGGAATGTCCCATTTTTGAGCAAAATTTAAAGAAAATATAAAG 3475
Query 187 ----------- 186
Sbjct 3476 GTGTCAGGACT 3486
