Nucleotide Global Alignment

Description

Query:
TRCN0000473708
Subject:
XR_001756630.2
Aligned Length:
2853
Identities:
160
Gaps:
2667

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CTAAAAATAATAAATGAATAAAATAAATATATAAATAAAAATTTGACCGACAGCTTAGTAAGGATTATATAGTT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  ATGTCTGCTACTGTTTAAAAAGGCTTTTCTTTTTTTTTTTTCTTTGACATAGAGTCTTACTCTGTTGCCCAGAC  148

Query    1  ----ATGCAGTGGCGCCATCTCAGCTCACTGCAACCTCCATCTCCCAGGTTCAAGCGATTCTCGTGCCTCGGCC  70
                .|||||||||.|.||||..|||||||||||||||||.||||..|||||||||.||||||.||||||.|||
Sbjct  149  TAGAGTGCAGTGGCACGATCTTGGCTCACTGCAACCTCCACCTCCTGGGTTCAAGCAATTCTCATGCCTCAGCC  222

Query   71  TCCTGAGTAGCTGGGATTACAGGCGTGTGCCACTACACTCAACTAATTTTTGTATTTTTAGGAGAGACGGGGTT  144
            |||..|||||||||||||||||..|||||||||.||||....|||||||||.|||||||||.|||||.||||||
Sbjct  223  TCCCAAGTAGCTGGGATTACAGATGTGTGCCACCACACATGGCTAATTTTTTTATTTTTAGTAGAGATGGGGTT  296

Query  145  TCACCCTGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG--------------------------------  186
            |||||.||||||||||||||||||||||||||||..||||||                                
Sbjct  297  TCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGGGCTCAAGTGATCTGACTGCCTCAGCCTCCCAAAGTGGTG  370

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct  371  CTATTACAGGTGTGAGCCACCTCGCCTGACCTAAAAACACTTTTCAGCTCCAATTTTAAACTTAAAATTTTTCT  444

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct  445  TATTTTAAAAACAACATATGCATGTATTATCAAATACAGGAAAATATGAAGAGACAGAAGTACTTACTGATCAT  518

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct  519  AATCCTACCACCAGAGACATCACTATGAATATGTTTGTACATTTTTTTCCTGTGCATTCTAAAACATAGTTAAG  592

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct  593  ATTATGCTAAATATACAGTTCTCATGCTCTTTTATGTCAGAAGTGTTTTCCCATGACATTTTAAACCCCATAGA  666

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct  667  CATAATTTTCTAATGGCTACATACTATTCTATCTAACCATTTCCAGAGGTTGGATATTTATCCAGCTTCTGAGA  740

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct  741  CTTCCTGTTATAAACAACACTTTGATGAACATCTTGGTACATAAATCTTTTGCATGTGACTACTTCCTTAGGAC  814

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct  815  AGATTCCTAGAAGTGAAATTCTGGGTCAAAGAGTAGTAATATTTTAAAGGCTGTTTATGCATACTGACAAGCTG  888

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct  889  CTTCCTGGCAATTTGTCCAAACTTTTACTCTGACTAGCATTGTATGGGAGCTTCCCTGAGTGAATGCTGCCTTT  962

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct  963  GAAGTGGGGTCAGAGACTGAGGACCAAGGGGCACAGAGAAAGAAGAGTGTGGTCCTCGATGGGAGGACCCATCA  1036

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1037  CAAACCGTCTTGCACAGTGTAAACCCAGGAGAGGGGCTGAAGAAACCACTGCAGCCCGGGGCCGCCCATTCTAC  1110

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1111  CTGGCCCATGGTAGGCACTCAAGAAATGGTTTGCTACGTGAATAAACAAATCCACAAACATATATTTCTGAATT  1184

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1185  CCTATCATGCGTCAAACACAAGAGATAGGGAGAGAGGAGGAAAAGAAAAGCAAGGGATCATGGGATAAAAGGGG  1258

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1259  ACAGTGGCAGTGGGGTGGACAGAAGTCAGAACTAAATTTACCTCATGCTTTAATTCGGCGAGTTTTCTTAGAAT  1332

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1333  AGTCTGACCATTGCTTACGTTGAGGGTCTATAGTCCTCCCTTCCCCACAAGACAAAGTCCAACCTAATTCAGCA  1406

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1407  CCAAGATCCAAGCAGCTCGGAAGATACAGGAGGGAAAAATCTGGTGTAGATTAAGTGCCACCCCCCAGCAATGG  1480

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1481  CCAGGACACAGCAGCAATGTTACCTAAGAAAGCAACTGCGCCTCTTGCTGATCAGCTAGACATGAGGGCAGTGT  1554

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1555  CCTACCTCAGCGGTTTGCAGCGGACATGCTGTCAGGCCATTGGGATAGTTCCCATAAGCCACTCCTGGTTGTCA  1628

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1629  CCACTATTCCAAGTGGGCAGGAGCAGCCTTATTGACTGAGATGGGCGGCTATGGACACACATGGGTGTACGCAT  1702

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1703  GTGATGGAAATGGGGGCTTGGGGCCCTGAGGGTCCACAGGGGCTGCGTGGTCAGGGAGGGTGGGCATGGCATCA  1776

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1777  CAGGCACCCCAGGGGAGAAGCTGGCTTTCTTCCCATACTTTTGGCACTGTTTTCTGTTTTGTTTGCCTTCAAAG  1850

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1851  AGCAAGTGATGGCTGGACAGCAAAGAGGAGTGGAGGCCGGGAGAATGGGCAGCTAGCCCAGCGCTCTCCAATAT  1924

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1925  CTGGGAGTCGACCGCACTCCTGCACTCCCTGTCATCCCTGCTAATGGTGAGGAACTGAGCAAAAGAGCCTCCAG  1998

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1999  AGTGACAGGTATTACCATTGCTCCAATCTTACAGATGAGGAAACTCAGGCATGGAGAGGTTGAGCGACTTGCCC  2072

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2073  AAATTCATGCAGTTAGGACCTGGCAGAGCTGCGCTTTGAACCCAGGCTGCCTGGCTCTAGAGTGTGTGCACGAA  2146

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2147  ACTTCACTGCCATATGAACAAAACTGCAGGACATATGTTCTCAAAGCAAATAAGCCTCCCAGAGAGGCTTTTCC  2220

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2221  TGATGGCTTCAAGGACCTGCCCTAGCCTGGTCTGACTTCCCAGAGGGGATCCAGTCCCAACATTGGCCCTATCT  2294

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2295  TTAGACCACATTTCCATCCCATTCTCAGTGAAAACCCTGAGTCATGACAGAAGACAACCAATGCTGGAGAGAGG  2368

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2369  AGGTTTCAGGTAATGCCTGTTTTAGGCATCCTCTCCTTTAAGAAAAATTTTTATATCAAGGCACCTCAACATAA  2442

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2443  TAATACCTTTATTGCATATAGGTAGAATATAAAACTGACTTGTAAGACCACTCTGTGTGTGTGTGTGTGTGTGT  2516

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2517  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTCTAGCTAGCCTGCAGGGACGGGACTCAGTTCCTCAGCAG  2590

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2591  CCCAGTGCCTGGCACAACAGGCATTGAATTAGAAGTGCCAGACATTTTCAAACTTTAAGGTATAATTTGTTTGG  2664

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2665  ACACTTTGGCTGGGCATTTTGATAAAACATCCCTAGTTAAAAGATGGCAACCAACAGGCATCAAACCAAAACCA  2738

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2739  CCCTCAAAGAGCAAAATATAAGGCCTTTGTAACAAGAGTCACAGAGTTATGGCTGGCCGCGGTGGCTCATGCCT  2812

Query  187  -----------------------------------------  186
                                                     
Sbjct 2813  GTAATCCTAGCACTTCGGGCCGTCTCTATTAAAAACACAAA  2853

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