Nucleotide Global Alignment
Description
- Query:
- TRCN0000473708
- Subject:
- XR_002956245.1
- Aligned Length:
- 3762
- Identities:
- 163
- Gaps:
- 3576
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TTGTCTTACTTTTCATTTTGTCTTTTTGTTCTGCTTGATGGAACTTTTGACTTTTTTTTTTCTTATTTTTCCTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCCTGTTTCTCGTTGATGTCTAACCATTCATTTTTCATAGCATCCTGATCTTATTTCAAAGATGCATTCATCTT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGTCTAGCTTTATGAAATATGCATATCCTATGTTTATAAATATCTCTAAATAAAAATATGTATGTATCTGTTTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGTATGTATAGTTATATACCCAAACTTCATTCTGCTGTGTCTGTCATCTCTTTTTTTCTTGAAGTTACTTTTTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCTGTTGCAGATTTTAGCTCGTATTTTTTTTATAAGATGTGATACTCTAATACATCTTATTCGATGTATTAGAT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ACATCTAATAATAGTTGCCTAACTATGGCTTGCAGTATCTGGGTTGCAGCCTGTTTTTGTACAGCTCTTGAGCT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAGATGGCTTTTTAACATTATTAAAGGATTAGGGGAACAAAGTAGGCAGAAGAATATGCTACAGAGACTGCATA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGGACCACAAAGCCTGAAGTATTTACTATCTGGTCTTTCATAGAAAATGTTTTCCGATTCCTTTTTTAATGTCT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GAGGATTCCTTTCATTTTTAAGAGATGGCCTCTAAAAGCTGATTGGAAGCTCTGTATGTAATTAGGGCTTGGTT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGTTTCACTAAAGAATAGCTTGATAATACTAAAACCAGCTTTATTTTAGGTAGCCCATAGTGTCATTGTTTATT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGTCTTTTCCTTGAGGCCTTTCAGTTTCTCTAGAGGAGAATCTCTTAATCTCCTGCCTGGAGTGTACAAAACTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTACACATGTTTCCAAGGTTCAGTTTCTTCAGAGGCAAAAATCTTAGTCTTCTGCTGGAGTCAGAGTGGCCTGG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CTGCATAGAAAGGCAATCAGAGTGGAGAGTTGTGAGTCTAGTTGCCACCTACATAGAAGTCAGTGCACAGCACA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TCACTGCCTGTATACTTCTTAATCTTGTACCTCTTAAAATAAATTATCATAGAATTTTAAAAATTTAAACACAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TCAGGAATGGTATCATTATCTGTTTGTATTGTATTGATCCATATGTTTTTGTATACATTCCCATATTTTTGGTA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TTACATGTTAAATATTTAATTCAGTTGTCTAGAAAACATTAAGTTGTTGCTGAGAACTAGGAAGACTTAATCTT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TGCTTTTCAAAATAGCCCTGTGAGGTTGTGGACTGGCGGCATTTTACAAATGAAGAAACTAAGACACAGAGAAA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TTAATTTTCAAGTGGAAGATCACATAGTTTAGTAAGAGTAGAACCAGGATTAAGCCAGACACTCTAGGTCTAGA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GAATGCTTTCTTTACAACTTTGTCACACTATAGTTTAAGATAGTATATGATTACATGGCGAGTGAATTATATTA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GTAAGTGATACAATAAGTTCAAAAGAGGAAAAGAATGGCCTCAGCTGGGAAGGTAATGTTAAGTATCATGAAAG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ATATGGAGCTTTTGTTGAGTCTTGGATTGGGTAGGAGGAGGGAAGAGTTCAGATGATAGATTATGATCCAAGAC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AGTGTAGTGATGACACTCAGGAGATGGCAAGTACACTATTCTGATTGAGGTGGAGATTTGGGGACTATTGAATG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AAAGCTTGAACATGTGAGTGTGGCCAGATCATAGTATTACATACGGGTTATTGGGAGATGGTGTTCTAATGTGG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AACTCAATAAATAATTAGGTTTTTAAGATTTATCCAGTATGCAATATGAAGTGAGGATGCAGTGATTATACCAT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TTTAGGCATTTGTGGTGTGGGACTGTAAAGTATTAGTGATAAGTGCAAGATCATGCTTCATGTCTGGATCAGAT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TGCATGTAATTTTGTTTTCCTTTAGTGTTGACATATTTTGTAATTTCATTATTCTAGGATAACAAAGTGTGGTG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GTAGGTGTAATTTTTGGGAAATTTTATTCTGATGATTTGGTACCACTTTTGGCCAAAGATACTATTTTGTTTTT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CAGTGTAAGAAAAGAAGTTGGAAATTGTCTCCTTATAGATTCTAGTAAACATTTTCAGTAAAAATAAAGCAGTG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TTTTTCAAACCTGAGTTTAAGGCATTTAGGCTATGAGAGATCATAGCTGTATCTTAAAAGCAGTTCAGTTGTAG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TTTTGCAGTTTGACTATATTCATCTTTCTTTGTCCTCTTCTAATATGTAAGCTCTTCCTTATAATGCCAAGAAA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GAGATGGATGGACCTGTATTGTTTGATACAGGTTGAGCATTACAATCCAAAATCCGAAATGCTCCAAAATCCAA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AACTTTTCCAGTACTGACATAACACCAGAAGTAGAAGACTTTACACTGGGCCTCATGTGAGAGATTGCAGTTAA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AATGCAGTCAAAATTTTTTTCATGCACAAAATTATTAAATATGTTGTATAAAATTACCTTCAGACTATGTGTGT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GAGATATATATGAAAGGATTCTTCTGATTATGAGAATGTTTTAATTCTTTACTTCTGTCAGGGCAGTTCTGTTT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TGAAAAGATTTTATGTGTTACTGCTAAAAGTACCACATTGACTTAGGTGCTATGTACAGTGTTTTAGAGGCAAT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GTAATCAATAGTTACGTGCACAGATTCTAGATCCAGACTGTCTAGTTTTAAATCTCAACTTTCTCTAATCTAGC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TGTGATTTTGATATTTTTACTTTTACCTCTCTGCCACAGTTGTTGTTTTTTTGTTGCTGCTGTTGTTTGTTTTT 2738
Query 1 -------------------------------------------ATGCAGTGGCGCCATCTCAGCTCACTGCAAC 31
.||||||||.||.|||||.||||||||||||
Sbjct 2739 TGTTTTCCTGAGACGGAGTTTCACTCTTGTTGCCCAGACTGGAGTGCAGTGGTGCTATCTCGGCTCACTGCAAC 2812
Query 32 CTCCATCTCCCAGGTTCAAGCGATTCTCGTGCCTCGGCCTCCTGAGTAGCTGGGATTACAGGCGTGTGCC---- 101
||||..||||||||||||||||||||||.||||||.||||||.|||||.||||||||.||||||||||||
Sbjct 2813 CTCCGCCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCGAGTACCTGGGATTGCAGGCGTGTGCCACCA 2886
Query 102 -------------------------------------------------------------------------- 101
Sbjct 2887 TGCCCGGCTAATTTTTTTTTTGGAGACGGAGTCTCACTGTGTCACCCAGGCTGGAGTGCAGTGGCGCGATCTCA 2960
Query 102 ------------------------------------------------------------------ACTACA-- 107
||||||
Sbjct 2961 GCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTGCTGCCACAGCCTCCCTAGTAGCTATGACTACAGG 3034
Query 108 --------------CTCAACTAATTTTTGTATTTTTAGGAGAGACGGGGTTTCACCCTGTTGGCCAGGCTGGTC 167
|.||.|||.|||||||||||||||.|||||||||||||||.|.||||.|||||..|||||
Sbjct 3035 CGCCCGCCCCCATGCCCAGCTAGTTTTTGTATTTTTAGTAGAGACGGGGTTTCATCATGTTAGCCAGCATGGTC 3108
Query 168 TCGAACTCCTGACCTCAAG------------------------------------------------------- 186
||||.|||||||||||..|
Sbjct 3109 TCGATCTCCTGACCTCGTGATCCAGCCGCCTCGGCCTCCCAAGGTGCTGGGATCACAGGCGTGAGCCACCACGC 3182
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3183 CCGGCAATTTTTGTATTTTAAGTAGAGACGGGGTTTCGCCGTGTTGGCCAGGCTGGTCTCATACTCCTGACTTC 3256
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3257 AGGTGATCCGCCGGCTTAGACCTCCCAAAGTGCTGGGATTACAGACGTGAGCCACTGCGCCCGGCCCACAGTTG 3330
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3331 TTTTTTGTTTGTTTGTTTGTTTGTTTAAGTTTTTTAAAATGTCTGTAAAGTAGCAATAATAATGTGGTTAGTGT 3404
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3405 GAGAATTAAAAGTTAATTGGTAATGCCCGGCATATGGCAAGTACTAAGTGATAGCTGTTAATTTTCCATGCTTG 3478
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3479 ACATAAACTTTACGTAAAGGTTACTTTTCTAGGTTTGTTTGCCAAGCACCTTAGTTTGTTTTGCGATTTCAAGG 3552
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3553 AGAACAATTTGGTGTATAATGGAAATCTGAGTTCTATCTTTGGGCCATGCACTGATTTAACCTTGATTAAATCA 3626
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3627 ATTTGTGTGTGTTGGGGTGGTTCAGATAAGATAATCTCTTCAGCCTATTTTAATAGGTGAACATGTTGAAACTT 3700
Query 187 -------------------------------------------------------------- 186
Sbjct 3701 TTGCTGTTTTTGAATACTCAGTTGGAACTTGTTTTCTCTAAAGATTTTTTCTTATTACTAAT 3762
