Nucleotide Global Alignment
Description
- Query:
- TRCN0000473708
- Subject:
- XR_939087.2
- Aligned Length:
- 3561
- Identities:
- 160
- Gaps:
- 3375
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TTTCCTTCAGGATTTGCTATCTATCATGTGATGCTACACCAGAGTCAGGTTGGAAAGCAAGCCACATTATATGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GATTAATAATAAACATCTAATGAGATTTTGTGATTTGTAGGGCAATACCTTCTAGGCCCCTTAGATGGGAATTT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGGCAAGAGAAGAAAAGGTCAGATTTTAGTCCTCACCATTAAGTATTGTGGTGTTTTGTTATACAATAGGAGGT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AACTGAAATGTTGTGTGAACCAGATCTGGCTAATGAGGAGAGGAGCTTCTGAGGCACAGAGCTGATGGGCAGCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGGCTTGGCCCCCACAGCTATGGCACAGGGAGCAGGGTCATCAAAATCCACTCTGCTCTTCCAGAAGCTGCAGA 370
Query 1 ------------------------------------------------------------------ATGCAGTG 8
.||||.|.
Sbjct 371 GAGAGGGAACCCTAAAACCTGACATGCCAGAAAAGATGGAGTTTTGCTCTTGTTGCCCAAGCTGGAGTGCAATA 444
Query 9 GCGCCATCTCAGCTCACTGCAACCTCCATCTCCCAGGTTCAAGCGATTCTCGTGCCTCGGCCTCCTGAGTAGCT 82
||||.|||||.|||||||||||||||..|||||||||||||||.||||||||||||||.||||.|..|||||||
Sbjct 445 GCGCAATCTCGGCTCACTGCAACCTCTGTCTCCCAGGTTCAAGTGATTCTCGTGCCTCAGCCTTCCAAGTAGCT 518
Query 83 GGGATTACAGGCGTGTGCCACTACACTCAACTAATTTTTGTATTTTTAGGAGAGACGGGGTTTCACCCTGTTGG 156
|||.||.|||||.||..||||.||||.|.||||||||||||||||||||.|||||.|||||||||||.||||||
Sbjct 519 GGGGTTGCAGGCATGCACCACCACACCCCACTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGG 592
Query 157 CCAGGCTGGTCTCGAACTCCTGACCTCAAG-------------------------------------------- 186
|||||||||||||.||||||||||.|||.|
Sbjct 593 CCAGGCTGGTCTCAAACTCCTGACTTCAGGTGATCCGTCTGCCTCAGCCTTCCAAAGTGCTGGGATTACAGGCG 666
Query 187 -------------------------------------------------------------------------- 186
Sbjct 667 TGTGCCACCACGCCCGGCCTGATTACCAGATTTTCTTGTTGATTGTGTCATTAGTCATGGCTATCCTAAGACTT 740
Query 187 -------------------------------------------------------------------------- 186
Sbjct 741 TTGCCATCCACAGACAATTGTTATCTTGTTTTGATTCTTTTCAAAAGGCAGTTTATAATCAGCTATAGAACTCT 814
Query 187 -------------------------------------------------------------------------- 186
Sbjct 815 GACAGGTGTTCTTGAAAGCAAGTCTCTGATAACTTTGGAGATTGGACTATTAGAATAGAGGAAAAAACTTCTAA 888
Query 187 -------------------------------------------------------------------------- 186
Sbjct 889 GACTTTCCTGGAGATGTTACATGTTAATAAATATTGAGTGGAACAAGAGTTAATTGCATGGACTAAACTAATAG 962
Query 187 -------------------------------------------------------------------------- 186
Sbjct 963 AAAATCGAAATAATCTTTTTATAAATTTCCTGAAATTCTGCTGATCCTTTTTGTTTTGGTTTTCAGAGTCAAGA 1036
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1037 AAACTTTTTTCCTGTTGAACTAGTTATATCTTTTAACAATTAACTACTATATATTCCTATAAGCAAATTTGGAG 1110
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1111 CATGTTTCTTTCTACCTGATTTCTTTAGAATTTGGAAACTATTTGTGACTATTCTTAACTTATGGCAATATAGT 1184
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1185 TATTTGCATAAGTTCAATAAGAATCTGTTTTCTTTTGTAACAGAACACAAGTGGGGACACTGGCTATTTTACCA 1258
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1259 GGCTTTTGACTGAAATGGCATGCTTCCAACTGCTTTAAAAATTTGAGGTTGACTTATAAAGCCGATAAAAAGCC 1332
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1333 CCTTGGAGAAACTGGCCTCATACCTTGTCTATGCAGTCCCTGTATAGAGTAAAAAATGTCACTTTCTAACAGGT 1406
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1407 TCTGGAACTCCAAGTTGTATTGGGACCTTAAGAGGGGAGGAATTCACACAATTCATACAAGTATTTATAGGGAC 1480
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1481 AGATAAATCAGTGGCTAGGTTCAAGGCTTTAAAAAGTCTAAGCTAAGGTTCCTTACAGAACAAAGTTCCCGCAA 1554
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1555 AATAAAAAATATATATATATGAGAGTCTATACGACAAATAATTATTCTTGCTGCACTTTATGCAAATAATCAGG 1628
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1629 CCAAGTATAATAAGACTAAAACTTAATTGCAAACAAATCAGTACTACCATGATTTGTCTTTGATAAAAGTGAAA 1702
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1703 CTGGAGACAAAAAGACCATAACATACCTGTTGTTAGATTCTAGTCTTGTCCATTGTTATTGAGTTTTAAAATAT 1776
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1777 TATTTTCTATGCAACAAATATCCAAGCTAACATTTTCAAGTTTTTCTTCCATTTTTCTGAGTTAAACACAATAA 1850
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1851 AATTGCTAGTATCTCTTTTCTAAGGCCCTGCAGACTAAAGTTTATTTCTTATAACACAGGCAAGAAAAATGTGT 1924
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1925 CAGATTGCCAGCATCTTCCTCCTCTGTAACTAAAGATGCTTTGAGTGTAACGTCTGGGTAGATTATGCCCACGA 1998
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1999 TTAATGTTTGTTTTTCTTCTGGTTCCATATAAATGCCTCTTATTAAAAGTCTATTTGTCTTATATTTTGACAAC 2072
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2073 AGGAGGTTGGTTCTCCAGTCAATTCACTTACATTTCAAATGGCATCTGATCTCTTCTTATAAGCATTGTTAAAC 2146
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2147 TGGGCTTAAGCATTTTATTAATCACTGGGTGCTATTTGATTTTTAAAATAATTATTTATTATATTCAACAGGGG 2220
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2221 TACAGATAATTAAAGTTTATGTCTTCAGGCTTCAGCCATTCCAAGTCACGCTACTGATGGCCCAAGGAGTCCAA 2294
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2295 CCCTTACCATCACAGGAGGATCCTAGTTCCTACTAATCTTTAGAACAGTCAGTGAAAAATTTCCATGCCCTCCA 2368
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2369 AGGTTAGGCAGGGATGACAATCCTATTCAGTAGGAAGTAGCTTCAGAAGATGAGATATTTGGCCCTCTCTAAGA 2442
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2443 ATAAGGAGAATATAATCTCTCAGGGAGGAACTGAGATAGAATAGGAGTGGGATGTGGCTCCCTCTTCACATATT 2516
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2517 TTTTCTTCTTTATTCTCTTCACAAAATCCACAGCACTATCTTGCTGATGCTATACCAACTAATCCTGAGGCTTT 2590
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2591 AGTCACACATAGAAAACAGTCATTCTTCTGTGCTCTCATAATGTTTAACCACACCTTTTATTTAAAATATTCTA 2664
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2665 AAAGTTGGACTTAGGAAATCTTAACACTGAACCACAATTGCAGAGTGTCCCACCTCGGGAAAGAATGCTGAACA 2738
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2739 ATTGATTTACAGCCTTGTCGTTGCTGGCCAGACCACCAGGTGGCCCATTACTCAAGATAACCATAGCAACAAGA 2812
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2813 TGCGCTGACCTGCATACCCTACCCATCATGTGCTTTGCCCAGCTCAGCCTGAATGTTTTACCCCTGATGTCAAT 2886
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2887 TCCTGTGCTTTGCCTAATCAAGCAAACAAAAAACCCTACTGGATTTTTTTAAGGAGCCATCCAGAGGATTCTTA 2960
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2961 CACCTCACTTCTGCTGTCTCCCTTGCACTTCAGCACAAGCCCCAAAATAAAAGCTTTGTCTGGGAAATCTGCTT 3034
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3035 GGCCTCGTGTTAATTTCCATTACAGGGGAGGCCAAAGACCCTGTGATCTATAACTCTCTCTCTCTTTCTGTCAT 3108
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3109 AAATTAATGAATGAAAACTGAAATGCATCCAATGCCACGGAGAACTTTTATTAGTGATCATTTCACTTAATAAT 3182
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3183 TTAATTCGTCTCACCACACCTTGTTTCTTCAGCCATAAAATAGGGTTTATAATGTATCTACTTTGTAGGGCTGT 3256
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3257 TGGGAGGCAGAGAAAATATGTATAAGATGCCTAGATTTGTGCTCACACGAAGTAAACGCCTAATAAATGTTGGC 3330
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3331 ATTAAACATTTATATGAAGAATGTTTTGATTTTCATGTTCTTTTTGAATACTTTTTACTTCTTCAATTTTCTAC 3404
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3405 AATGAGAAGAATTACTTAATAATCACAAAGCAAAACAAAGCATGAAGGGCTTTAGAAAAATCTCTGGGTGATAT 3478
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3479 TAATTCAATATTGAGCTCCAAATATAAAGTTCTATAGAGCGAGGTTGAGTTTTAAAATTTGTGGCTTATAAATA 3552
Query 187 --------- 186
Sbjct 3553 GCGCCTGTC 3561
