Nucleotide Global Alignment

Description

Query:
TRCN0000473708
Subject:
XR_946659.3
Aligned Length:
4869
Identities:
162
Gaps:
4683

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AATTGGTACCAGGAGAGCCCAGAAGCCACACACGCATCTCTGCCTCTTTGCTCTGGCTCTCCCACCCTCTTCCC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GTCTTTCTCTGCTTCCTTGTCACTGTTACTCCAGGAGACGTTCACTTTTCACCAACCTTTCTCCAAGCATCTCC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AAGCCACTGACTATATATATTTTGCTACAAGAGACCTAGAAGAGGAAAAAAGGCACGAGACTTTTCAACACATC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GTTTAAAAAAATCATCAACGAATTTCTTGCAATGTTTGAGAACAATTAAAAGGAAAAAGCGTTTTTTAAAAAAT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CTATCAACTAAGTGAACAATCATTCATATCGTCTACATCCTGAGATATTATTGTCCCTCGCTGCGGACACCAGC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GAGATGACAGCTGCTTTTTCATTTTTGAATGTAATAAATATTTGCTGCTTTTAATATTTTCCGGAATCTCCCCT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CGCTATTCCTTGGAATTTTAACTCTAAAGATTGGAGAACAGATTATCAAAAAGGCTTTTGCAAGCCTCCAAAAT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GATGCTGAGTCCGGACCAAGCAGCAGATTCGGACCATCCCAGCTCGGCGCACTCGGATCCGGAGTCCCTGGGCG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GCACGGACACCAAGGTGCTCGGCAGCGTGTCGGACCTGGAGCCGGTGGAGGAGGCCGAGGGCGACGGCAAGGGC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GGCAGCCGAGCCGCGCTCTACCCGCACCCGCAGCAGCTGAGCCGCGAGGAGAAGCGCCGCCGCCGGCGCGCCAC  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GGCCAAGTACCGCTCGGCCCACGCCACCCGCGAGCGCATCCGCGTGGAAGCCTTCAACTTGGCCTTCGCCGAGC  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TCCGCAAATTGCTGCCCACGCTGCCCCCGGACAAGAAGCTCTCCAAGATCGAGATCCTGCGCCTGGCCATCTGC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TACATCTCCTATCTCAACCACGTCCTGGACGTGTAGGGCGGGGTGCGCCGCGGGGGGCCGCCTGTCCCGGCGTC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  CGCGAAACGCTACGGATCCGGACGGGCGCCGTCGCTCGGGTGGCGGAGGCTGCGGTGGCCCAGCGAGACGGCCG  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CCTCGAGAGACGGCCGGGGAAGAAGCTCGCTACCTGTTCTCTCTGGTCAGCAGGGCGACGAGGGAAGGTTTCCG  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  ACGCAGGCAGGAGAGGATCTTTGCAATGTCATTTCAAATCCAAAGCTGCTGAGCACCCTCCAAGAGAGACAAGC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  ATGGTGGCAGTCTGCTAGACCAGAGGGTGACTGGCTCATTCCCTGAGCACAGCGCAGACACAGTGATTATTCGC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  CCATCCATGAGGTCTCGATTCTTCTTTGAATGACGATGCCACTCAACAACTTGCCAGGCCATTGCTGCTCCCCA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GAAAGCCTAGCCCCAGCTGGCCCAGCGGACAAGACTGCCTGTGCTGAATATTTCTCCACCCAAATGGACTTCCC  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  CTCACTTCTACCACTGCCCGGAAACTTCCAGAGAACAAGGGTAAAAGTATTGGGCAAAACAACCTTCCTCTCCA  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GGGAGAGGGGAAGAGGAGGGGCAGTGTATGATGGGATGGGATGGTAAAGGAAGGGCCGACTGAGGAGAGAGGAA  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  TGGGTAAGGAGGAAATGAGACTGGGTGGGAGTGGGGGACTCTGGAGGGAATACCCGCTTCCCACAGGAATGCTG  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  TTTGCAGGAGCTCCCTCCAGTGGCCCTGCCCCATGAACACGTATCACCAGAGCACTATGATAAGGCGAGTAGCC  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  AGAGCCAGCCTCTGTGATGCTGTGATTTATCCAACTCTCCTCACTGCTGTCTCTGGCTACCAGTTTTCTTGCTG  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  ATGTTTGGGGTGGAGAGAATTTAAGGGGAGAAGAGGGCCAACTTAAGAGCATGCACAGCCAATACCCTTTTCCA  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  TATTTAGATGTGCTATCTCATTTATCAGTATTAGTAGTCGAAATAATAGCTAATGTGGGTTGAGTGTATACTAC  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  ATGCTTACTAAAGTGCTTTGCATGCATTATCTCCTGTAATTCTCACAACCACCCAGTGAGGTAGGTACTTTTAT  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  TGTCTCCATTTAACAGATGAGGAATTTGAGGCTTAAAGAAATTAGATGACTTGCTTAGGGCCATGAAGCCATGT  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  TTATCAGTTTATCAAAGTGCCTGCCCCTACCCATCATCCTCTAGAGTTGTCCTTTGATAGAGGGGTAGCTGTGC  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  CACTCACACACCACCCCCCTTGGTGCCTGCACTGCATCTTTCCATCCATGTGCCTAGGGAAAGCTTCAGCTCAT  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  GTAATGCCTAAGGAGTGCTGCGTCTGCAGTACACACAGCTGCCCAACCAATGGGACCAGTGGAGGCCAAAACCA  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  AGCCTGTGCTCTGTATGCCAAGTCAAGCATGTGCCTTGGCTTGAAGTTGGACTACCTGGAGGAAGGGGAGCATT  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  TTTCTACTTTGCAAGAAAACACTATAGGATAATGGTGGCCCTGTGACAACTCCCCCACCAGGGCACCGTCATTC  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  ACTACCACATGGGTGAGGCTGGCTCCATCCACACTCCTCTGCACCTTCCAGCCCATTCTCACGCTGCTTCTAGA  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  CCTATCTTTAAAAATTAGCGTGCCATCCTCCTTCGTGAATGTCCATTTTATTTTTTAATAAAATTCAAGTTCCC  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  AATCTAGGCATAGAAATGTTTCACAGTCTTGTTCCAGACCCTCACTAGTGCCATTTTCAGCCACTCTCCAGAGA  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  TTAAATATTCCTGCAAACTCGGTTTCCTCACTTCCCCAGAGAGGCCAAGTCTTTTTCTTTTACGACCTGGGCCT  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  TTGTATTTACTTCCCCTTTACTCACAATGCTCTCCCCTAACCTCATTTTTTACCCAGAAAATTCCGATGATTCC  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  ACTGTGACCCAACTCAGACCACACGTAACCACACGTATCATTACAAAGCTTTCCGTTTCTTTCAGAAGCATTAG  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  CTGCTCTGTTCTCTGAGTCCCACATACATACATCGTTTTAACTGAATTTACCTGTTTCTCCCATCTCTGTGTTT  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  GAGACCCAAGACTCTGGAGCCAAGTTCGGGCCCTGGCTCCAATTATTCTAAGTGTATGACATTGAACATGTTAC  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  TATATCTCCTCAAGCCTCCATTTTCATCCATAAGATGGGACAACGTATGTACCAATCTCAAATGCATGTCATGA  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  GGTTTCCATGGGATAATGTATAGTGCTTATCAGAATAGGAATACATGGGAAGTGCTCAATAAATGTGAGCTATT  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  TTCATTACCTTTGTATTTATAATATGCACAGGAATTAACATAGGATAAGCTAAAATCAGCTTTAATTCTTTAAT  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  ATAGTAATGATTTGTGGTTTCCACCAACTATATCCATCTGCATATGATACATTACTAACTCAACAGTCAGCCAG  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  AAATCATCCCCATCTTCTAAGACAGGAAGCATAGGTAAATTAATAGTCATCCATGGAATACACCACACATGCAC  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  ACCTGTAGAGTTATCTACAGGTCTGAAAGCCCCACTCGACTCATGATAAAGGCCCAGTCTATGCCTTTTCTCTT  3478

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3479  TTACCTTGGTTTTTCCCATAGCACGAATGCTGTGATAAGCACTATAGCAGACTGGTCAGAAGCACAGACTCTGT  3552

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3553  CAAAGCTAATTTTTAAAGATAGGTCTAGAAGCAGAGGGCCAGTTTTCAGGCCTGCTCACCCATGATAGGTCAGG  3626

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3627  CAGAGGGGGATGAGCGGGCACTCACATCCAATGTGTGTGTACGAGCAATTGCCAAAGTTAAGGACGACAAGGGG  3700

Query    1  ---------------------------------------------------------ATGCAGTGGCGCCATCT  17
                                                                     .|||||||||||.||||
Sbjct 3701  TAAATTTTTTTTTTTTTTTTTGAGACCAAGTCTCGCTCTGTGGCCCAGGCTGCAGTGGTGCAGTGGCGCAATCT  3774

Query   18  CAGCTCACTGCAACCTCCATCTCCCAGGTTCAAGCGATTCTCGTGCCTCGGCCTCCTGAGTAGCTGGGATTACA  91
            ..|||||||||||||||||.||||||||||||.||.|||||..||.|||.||||||.|||||||||||||||||
Sbjct 3775  TGGCTCACTGCAACCTCCACCTCCCAGGTTCAGGCAATTCTTCTGGCTCAGCCTCCCGAGTAGCTGGGATTACA  3848

Query   92  GGCGTGTGCCACTACACTCAACTAA-TTTTTGTATTTTTAGGAGAGACGGGGTTTCACCCTGTTGGCCAGGCTG  164
            |||.|||.||||.|..|.||.|||| |||||||||||||.|.|||||||||||||||||.||||||||||||||
Sbjct 3849  GGCATGTACCACCATGCCCAGCTAATTTTTTGTATTTTTTGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTG  3922

Query  165  GTCTCGAACTCCTGACCTCAAG----------------------------------------------------  186
            ||||.|||||||||||||||.|                                                    
Sbjct 3923  GTCTTGAACTCCTGACCTCAGGTGATCCGCCCCCCCCTAGGCCTTTCAAAGTGCTGGGATTACAGGCGTGAGCC  3996

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 3997  ACCGCGCCCAGCCAGACAAGGGGTACATTTTTAAGATAGAAGGAAAAGTCATCAGGGAAGGTGGGTTAGATCAG  4070

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 4071  CTGTGAAAGTCCCCTCAAATATGCAAGTGCTCACAGATGATTTTCAGGAAATACTGTTCGTTTTACTGTGATAA  4144

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 4145  TGGTATATTTGTTGTTAAAAGAAAAAAGAGTCCTTATCTTTTAAGAGATACTTACTGATGTCTTCATGGATGAA  4218

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 4219  ATGATGTGATGTTTGGGATTTGCTTCAAAAAGTCTTAAGGGGTAGTGAGAAAGACAGGATAAGAAAATAAATGA  4292

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 4293  AATGTACTTATTGGTGTTGTGTATATTTGAATCCATTTCACTATTCTCTTGGCTTTTGGAGATGTTTTAACAGT  4366

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 4367  TTTCCATAAGAGCGTTTTTTAAAATGTAGTTGCTCAGAAAATTTGTGCCAGTTGATTTTTACTCACCAGGAAGT  4440

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 4441  CGACTCCCGCTTAAACTAAGGCCACCACCCTCTTTCACAGAGCTCCACCCTTTAGCACAAGTCACCTCATGCCA  4514

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 4515  CTCAGAGAACCATCTCCAGCCCTGGTTACTTTTTGTGAATGCACCAGGTATTGCTCCACAGAGTCATCTCTGGA  4588

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 4589  GAAAGTTTTTTTCTTTGTCTTTGGTCAATGATCCTCTGTCCCTCTTGGCAGACTGACTCCAGTGGCCTTTTATT  4662

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 4663  TTCAGTTATTCCATCCTAACCCCAGGGAATCCTAAGAGGACCCGCCCCCATATACATATCTACCAATCACACCA  4736

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 4737  CCTTTCTCCTGATTCAAGAAGCCCCTGAAATCTTCCCTTTTTCTGATATATTGCTGGAATGATCAGCAAGGAGA  4810

Query  187  -----------------------------------------------------------  186
                                                                       
Sbjct 4811  TGAAGAACTCCCTCCTGACCTGGAAATACTTACTGAAATGAAGCAGGAAATTCCAACAA  4869

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