Nucleotide Global Alignment
Description
- Query:
- TRCN0000473795
- Subject:
- XR_001744571.1
- Aligned Length:
- 3056
- Identities:
- 1489
- Gaps:
- 1566
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TGACTTTCAGGCTCCGGAAACCTACGTCTTTCAGCCTCCGCTGTTTTTTAGTTGCAAATGATCAGAGACGGGTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AACTGCAGGCAGCCTGTGTTGCTGCCTGGAAGTAGATTTCCATCTTTCAGACACTAGTTCCAATGGGCCGGGTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTCTGGAAGGGGGTGGCAGTGGGGAGGAGGATGCTGTGAGCAGAGTTCTTGAAGCTCCACTCCTCTGGGGAAGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGAGCTGTGTGGGAGCCTTCTTACTGTGCCGGGAGCGTGTGAATTGGAAAGGATCCTGAGAACTGGCTAGTCCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGTTCCTCTCCGGAAAAGCAGTGGCTCTCGCTTCAGAGATGCGCTCAGCTTTCGCCTGCATCACACTGCATTCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TTAACACATTATTGAAATTACAAGCATCCAAAGCAGTTTCATGTGGACAGATTGCATATTTTGAAAGCCTGAGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TATTTTATCATGAAACATGCCATGTGGAATCTTTGAAGCATAGACCTCTGCGCAACACCTGAATAAAGAATCTT 518
Query 1 -----------------------------------ATGACAAACCAGGAAAAATGGGCCCACCTCAGCCCTTCG 39
|||||||||||||||||||||||||||||||||||||||
Sbjct 519 TTACCTGGTATGTGACAGAGCTTCTCACCACCACCATGACAAACCAGGAAAAATGGGCCCACCTCAGCCCTTCG 592
Query 40 GAATTTTCCCAACTTCAGAAATATGCTGAGTATTCTACAAAGAAATTAAAGGATGTTCTTGAAGAATTCCATGG 113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GAATTTTCCCAACTTCAGAAATATGCTGAGTATTCTACAAAGAAATTAAAGGATGTTCTTGAAGAATTCCATGG 666
Query 114 TAATGGTGTGCTTGCAAAGTATAATCCTGAAGGG---------------------ACAATAGATTTTGAAGGTT 166
|||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 667 TAATGGTGTGCTTGCAAAGTATAATCCTGAAGGGAAACAAGACATTCTTAACCAAACAATAGATTTTGAAGGTT 740
Query 167 TCAAACTATTCATGAAGACATTCCTGGAAGCCGAGCTTCCTGATGATTTCACTGCACACCTTTTCATGTCATTT 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TCAAACTATTCATGAAGACATTCCTGGAAGCCGAGCTTCCTGATGATTTCACTGCACACCTTTTCATGTCATTT 814
Query 241 AGCAACAAGTTTCCTCATTCTAGTCCAATGGTAAAAAGTAAGCCTGCTCTCCTATCAGGCGGTCTGAGAATGAA 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AGCAACAAGTTTCCTCATTCTAGTCCAATGGTAAAAAGTAAGCCTGCTCTCCTATCAGGCGGTCTGAGAATGAA 888
Query 315 TAAAGGTGCCATCACCCCTCCCCGAACTACTTCTCCTGCAAATACGTGTTCCCCAGAAGTAATCCATCTGAAGG 388
||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TAAAGGTGCCATCACCCCTCCCCGGACTACTTCTCCTGCAAATACGTGTTCCCCAGAAGTAATCCATCTGAAGG 962
Query 389 ACATTGTCTGTTACCTGTCTCTGCTTGAAAGAGGAAGACCTGAGGATAAGCTTGAGTTTATGTTTCGCCTTTAT 462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 ACATTGTCTGTTACCTGTCTCTGCTTGAAAGAGGAAGACCTGAGGATAAGCTTGAGTTTATGTTTCGCCTTTAT 1036
Query 463 GACACGGATGGGAATGGCTTCCTGGACAGCTCGGAGCTAGAAAATATCATCAGTCAGATGATGCATGTTGCAGA 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GACACGGATGGGAATGGCTTCCTGGACAGCTCGGAGCTAGAAAATATCATCAGTCAGATGATGCATGTTGCAGA 1110
Query 537 ATACCTTGAGTGGGATGTCACTGAACTTAATCCAATCCTCCATGAAATGATGGAAGAAATTGACTATGATCATG 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 ATACCTTGAGTGGGATGTCACTGAACTTAATCCAATCCTCCATGAAATGATGGAAGAAATTGACTATGATCATG 1184
Query 611 ATGGAACCGTGTCTCTGGAGGAATGGATTCAAGGAGGAATGACAACGATTCCACTTCTTGTGCTCCTGGGCTTA 684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 ATGGAACCGTGTCTCTGGAGGAATGGATTCAAGGAGGAATGACAACGATTCCACTTCTTGTGCTCCTGGGCTTA 1258
Query 685 GAAAATAACGTGAAAGGATGATGGACAGCACGTGTGGCGACTG-AGCACTTTAACAAACCTG-CTA-TGCA--C 753
|||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||| |
Sbjct 1259 GAAAATAACGTG-AAGGATGATGGACAGCACGTGTGGCGACTGAAGCACTTTAACAAACCTGCCTATTGCAACC 1331
Query 754 TTTG-CTG-ACATGCTGATT-GCGTGGGGAAGCAGG--CTCTGCTGTTCCTTCTGC-AGTACACAGTCCATGAG 821
|||| ||| ||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||
Sbjct 1332 TTTGCCTGAACATGCTGATTGGCGTGGGGAAGCAGGGCCTCTGCTGTTCCTTCTGCAAGTACACAGTCCATGAG 1405
Query 822 CGCTGTGTGGCTCGAGCACCTCCCTCTTGCATCAAGACCTATGTGAAGTCCAAAAGGAACACTGATGTCATGCA 895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1406 CGCTGTGTGGCTCGAGCACCTCCCTCTTGCATCAAGACCTATGTGAAGTCCAAAAGGAACACTGATGTCATGCA 1479
Query 896 CCATTACTGGGTTGAAGGTAACTGCCCAACCAAGTGTGATAAGTGCCACAAAACTGTTAAATGTTACCAGGGCC 969
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1480 CCATTACTGGGTTGAAGGTAACTGCCCAACCAAGTGTGATAAGTGCCACAAAACTGTTAAATGTTACCAGGGCC 1553
Query 970 TGACAGGACTGCATTGTGTTTGGTGTCAGATCACACTGCATAATAAATGTGCTTCTCATCTAAAACCTGAATGT 1043
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1554 TGACAGGACTGCATTGTGTTTGGTGTCAGATCACACTGCATAATAAATGTGCTTCTCATCTAAAACCTGAATGT 1627
Query 1044 GACTGTGGACCTTTGAAGGACCATATTTTACCACCCACAACAATCTGTCCAGTGGTACTGCAGACTCTGCCCAC 1117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1628 GACTGTGGACCTTTGAAGGACCATATTTTACCACCCACAACAATCTGTCCAGTGGTACTGCAGACTCTGCCCAC 1701
Query 1118 TTCAGGAGTTTCAGTTCCTGAGGAAAGACAATCAACAGTGAAAAAGGAAAAGAGTGGTTCCCAGCAGCCAAACA 1191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1702 TTCAGGAGTTTCAGTTCCTGAGGAAAGACAATCAACAGTGAAAAAGGAAAAGAGTGGTTCCCAGCAGCCAAACA 1775
Query 1192 AAGTGATTGACAAGAATAAAATGCAAAGAGCCAACTCTGTTACTGTAGATGGACAAGGCCTGCAGGTCACTCCT 1265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1776 AAGTGATTGACAAGAATAAAATGCAAAGAGCCAACTCTGTTACTGTAGATGGACAAGGCCTGCAGGTCACTCCT 1849
Query 1266 GTGCCTGGTACTCACCCACTTTTAGTTTTTGTGAACCCCAAAAGTGGTGGAAAACAAGGAGAACGAATTTACAG 1339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1850 GTGCCTGGTACTCACCCACTTTTAGTTTTTGTGAACCCCAAAAGTGGTGGAAAACAAGGAGAACGAATTTACAG 1923
Query 1340 AAAATTCCAGTATCTATTAAATCCTCGTCAGGTTTACAGTCTTTCTGGAAATGGACCAATGCCAG--------- 1404
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1924 AAAATTCCAGTATCTATTAAATCCTCGTCAGGTTTACAGTCTTTCTGGAAATGGACCAATGCCAGGGATGCTGC 1997
Query 1405 -------------------------------------------------------------------------- 1404
Sbjct 1998 TGAAGAACCAATGATGACAATTTTTAAAGAAAACAAGAATGAATAACAGATGAAACATCATCATGGAATAGAAG 2071
Query 1405 ------GGTTAAACTTTTTCCGTGATGTTCCTGACTTCAGAGTGTTAGCCTGTGGTGGAGATGGAACCGTGGGC 1472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2072 AACAATGGTTAAACTTTTTCCGTGATGTTCCTGACTTCAGAGTGTTAGCCTGTGGTGGAGATGGAACCGTGGGC 2145
Query 1473 TGGGTTTTGGATTGCATAGAAAAGGCCAATGTAGGCAAGCATCCTCCAGTTGCGATTCTGCCTCTTGGGACTGG 1546
|||||||||||||||||||
Sbjct 2146 TGGGTTTTGGATTGCATAG------------------------------------------------------- 2164
Query 1547 CAATGATCTAGCAAGATGCCTGCGATGGGGAGGAGGTTACGAAGGTGAGGATCTGATGAAAATTTTAAAAGACA 1620
Sbjct 2165 -------------------------------------------------------------------------- 2164
Query 1621 TTGNAAACAGCACAGAAATCATGTGGACAGGTGGAAGTTTGAAAGTCATACNTAATGACAAGNATGAGAAAGGA 1694
Sbjct 2165 -------------------------------------------------------------------------- 2164
Query 1695 GACCCAGTGCCTANCAGTATCATCAATAATTACTTTTCCATTGGCGTGGATGCCTCCATGNCACACAGATTCCA 1768
Sbjct 2165 -------------------------------------------------------------------------- 2164
Query 1769 CATCATGAGAGAAAAACACCCNAGAGAAATTCAACAGTAGAATGAAGAACAAATTTTGGTATTTTGAGTTTGGC 1842
Sbjct 2165 -------------------------------------------------------------------------- 2164
Query 1843 ACATCTGAAACTTTCTCAGCCACCTGCAAGAAGCTACATGAATCTGTAGAAATAGAATGTGATGGAGTACAGAT 1916
Sbjct 2165 -------------------------------------------------------------------------- 2164
Query 1917 AGATTTAATAAACATCTCTCTGGAAGGAATTGCTATTTTGAATATACCAAGCATGCATGGAGGATCCAATCTTT 1990
Sbjct 2165 -------------------------------------------------------------------------- 2164
Query 1991 GGGGAGAGTCTAAGAAAAGACGAAGCCATCGACGAATAGAGAAAAAAGGGTCTGACAAAAGGACCACCGTCACA 2064
Sbjct 2165 -------------------------------------------------------------------------- 2164
Query 2065 GATGCCAAAGAGTTGAAGTTTGCAAGTCAAGATCTCAGTGACCAGCTGCTGGAGGTGGTCGGCTTGGAAGGAGC 2138
Sbjct 2165 -------------------------------------------------------------------------- 2164
Query 2139 CATGGAGATGGGGCAAATATACACAGGCCTGAAAAGTGCTGGCCGGCGGCTGGCTCAGTGCTCCTGCGTGGTCA 2212
Sbjct 2165 -------------------------------------------------------------------------- 2164
Query 2213 TCAGGACGAGCAAGTCTCTGCCAATGCAAATTGATGGGGAGCCATGGATGCAGACCCCATGCACAATAAAAATT 2286
Sbjct 2165 -------------------------------------------------------------------------- 2164
Query 2287 ACACACAAGAACCAAGCCCCAATGCTGATGGGCCCGCCTCCAAAAACCGGTTTATTCTGCTCCCTCGTCAAAAG 2360
Sbjct 2165 -------------------------------------------------------------------------- 2164
Query 2361 GACAAGAAACCGAAGCAAGGAA 2382
Sbjct 2165 ---------------------- 2164
