Nucleotide Global Alignment

Description

Query:
TRCN0000473817
Subject:
NR_126496.1
Aligned Length:
4870
Identities:
398
Gaps:
4443

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AAAAAATCAAGAACAGAAGTCTCTCAACATTTAAGTTTTACAAACAAATAGAATCTGAGCCACTGGGTTAAACA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGACAAACGACACACAGTAACAAATATTGAAGACATCATAATGCCAAAGCAACAGAAGCAGCACCAGAAATGTT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCTGAGGCCACCATTTAATTAACGCAAGTTGAACATATGGCTTTGGTTACATGTGGTTCCAGGCCAGAGGCATG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GAAGTCAGTGTTTGTGGGAAAGCCAGGAGGAAAAGCTCCTCTCCCCACCTCCACCTTGTCACTCCAGGTTCTGG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TGACCCCATCTCGGGACACGGCCTCCCATTTCACTCCTGCACCAACCCCACTCTTGTAACACTGCACATGCAAG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  ATGTGAGCATCTTCAAAGTACGAATATTGCCTTCTTCATTTTAGAATCCATGATGTGCTTGTGGGGAGAATGAA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TGAATGCTCAAACATGAATGGAGAGAGACAGAGAGGAAGTGCAGGTCTAACCAAGGAAACCTTCTTTCCTAGAA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  AATCGTTGATGAGCCCGGAAAGAGTTGGCTGAACAACGGTAACAATTCTTTTATTATTATTTAACTTATTAAGT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TATTAGAAAAAGTAAAAGAGTGAGTCGAGGTTTTTGGATTGGAAGTAGGGACCCACTGAGTTCCCTCCAGGATT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GTGGAGTTTCTTTTACAGCCACATGTGGATAAGAAACTAAGGGCCACAGACCAAATGACAGGTCGGATGGCAAC  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CCTGGAAAAGTCACACAGCTCAGCCTGTTGGAGGAAGAGGAGCAGTAGAACCTGTGTGGAGCCTGACAGAACCC  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  AAGATGCCATTCACGAACCGAGAGGTCTTTCAAGATCACACACAGTTCTACGACACAGACATTTCGTCTTCTTG  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CCACTCAGTAGCGGGGCCCATCCCTCTGTGCCTCCAAGGTCCGTGTGCCATGTGGAAAACTCAGGTGTTCTGTC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  TCTGCCAGGACCTTCTTCCTGCTGCTTATTTAAGTGTCTGCTGCTTCGGGGCCTCAGGTGCCTGCTTTATCTCT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  TTCTCCTTTACTATCAAGTCTTTAAGCAATTTGCCAAGACGGAGAATCTCACTGGCCTGGTGGGGCTGAGCCTT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CCTTCACTGGCTGACCAACTGGGAAGTGGGCTGCTGCCTAGATCAGGTGCGTGCCACAGTTCATCTAGCCGTGC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CCAGAGTTCTAAGGTTATGCGCATGACCCCGTGTGTGGGCAGAGGCTCTTAGCAGGGGCCGAGAGCATTGGAGG  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  CATCTTGAGGGCCAGAGTCCCCAGCCCCAGATCACAGATACGGCATGATCAAAATGTGAGGGAGCAGGGGCAGA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GATTATTTGGAATAACGTGCTGAGTTTGTATACTTTTGACAATTAAAAGCCCTATGTCCCCCTGATGTTACGCA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TATGCTCCAGAGGAGCCACTCGGGACAAAGAATCAATAATGGGCGCTTGGTGTGCATTGAAAGCTGACAGTGTA  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  TATTTGTGGGGACTATACAGGGAAAGGAATATGAAGCCTTGACAAGATATGGTGAGTATGTATCGGTGAGGTAG  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  GTAACTCATTCATAAGGGACTTTGCAAGGTGGCAACACTGGTTCAAAGATATTACGAGAATAAAGATTTTGTGT  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  ACTCAGAGAACGAAAAGGAATGCTGACGTAAGATCACAAAGTTAGATACTAAACTGGCTAATGTGCTACAGGGC  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  AGCAAAACTATAACCTTTGAGGTAATTTATCTGACCAGATAGGAATCATTTGCATCTCTGTAGAACAGAAAAAC  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  ACTTACTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGTATCTGGCTCTGTCCCCCAGGCTGGCGTGCAGTAGCA  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  TGATCTTGGTTTACTGCAACCTCCACCTCCTAGGCTCAAGCCATCCTCCCACCTCAGCCTCCAGAGTAGCTGGG  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  ACTACAGGCACACACCACCATGCCCAGCTAATTTTTGTATTTTTTGTAGAGAAGGGGTTTTGCCGCCATGTTGC  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  ACAGGCTGGTCTCAAACTCTTGAGCTCAAGCCCACCTCAGCCTCTCAAAGTGCTGGGATTATAGGCGTGAGCTC  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  CCGTACCCAGACAGCACTTACATTTTAATAGTTTCTACACAGTACTATCTCATGTTATTTTATTTTTTAAAATC  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  GATAATGGGACTCTTGCTATGTTGCTCACACTAGTCTTGAACTCCTGGCCTCAAGCAATCCTTCCATCTTGGCC  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  TCCAAAGTACTAGGGTTACAGGCATGAGCCGGGGCTCCTGGCCTAACTAATTTCAGAGTTAAGAACGTTTGGAC  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  TCTATTTTATAGTAAAAAATAAGTCAAAGCTACCTTCCCCTAGATAGCCAAATGACTCTCAGATGGGCTCGTTA  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  GACAGTGCTTTAATTTAATATTGAAAGAACTTTTTGCTTCCCCTCCTCCAAGTTTTAATAATTCTTAACAGAGG  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  GAAACAGCAACAAAATTTTTGCTGTAGTGGGTATTAAAGAAGGGAAAACAATCATGAATGCCGGAGTCAAAATG  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  CCCAAGGAGCGGAGGCACCAGCGTTCTCCACCTGGTTTGGCGGCGCACCAGCAGTGTGACCTGGAATCTGATCT  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  CTCTGGAGCTCAGTGTCCTCACCTATAATATGGGGTATTGAACTACACACTTGGCAGGACTTTGCCCTAAAGCT  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  AATTTTCAAAATAAAAAAAAAAAAGCCACTTCCCTTTTCCCACATTAACCCTGAGAGAGAAAGAGGAAGCGGGA  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  AGCCCGCACATGGAAGCAATTTATTGCAGACGTTCCTGGGCTGGGAGAGGAGCCTTCTGACTGCTGCAGAGACC  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  ATCACCCGGTCCTGCACCTTTACCGGAGGTGCGGAGAACTGCTCGGCCCGCACCGGGCTCGGGGGTGTTCACGG  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  GCTGCGCTGCCTCCCCTGCGCGCAGGACAGGAGTCGCCAGAGGCCGGTGGTGGATTTCCTCCCCGCATCTCAGC  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  TCTCCGTCCAAAGTCAAATTGCTCTTTTCTCCGCCCACGCGGGCGTGGCAGCTGATATCCGGCCGCTGGGCGTC  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  CCCGCGCCCCCGGGGGCCCCGCCCTGCAGCTATCTCCGCGGCCCACCCGGCGGCGCCTCCCTGCAGGGCTGCTC  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  CCCAGCCCAAACCGCCGCGGCGCGACGTGGAGCCAGCCCCGCAAAGCTGCATCCACCCCCCGAGGACCAGCCCC  3182

Query    1  --------------ATGA-----CAGGTCGGAT----------GGCAACCCTG------GAAAAGTCACACAGC  39
                          |.||     |.||.|||.|          |.||.|||||      ||||   |||||| |
Sbjct 3183  TCGAAGGCAAGGCCAGGACCTCCCCGGGCGGCTGCAGCCGTGAGCCACCCCTGTTTTGTGAAA---CACACA-C  3252

Query   40  TCAGCC----------------------------------------TGTT-----------GGA---GGAA---  56
            ||.|||                                        ||||           |||   ||||   
Sbjct 3253  TCTGCCATTTCAGGCCGCACTTGCCCGTTGCCATGGGCGTTTTCTATGTTGACACAAGCAGGGACACGGAATCC  3326

Query   57  ---GA---GGAGCAGTAGAACCT--GTGTGGAGC-------CTG-----ACAGAACCCAAGATG----------  100
               ||   .|||..|.|||.|.|  ||||.| ||       |||     .|||.|   |.||||          
Sbjct 3327  CTTGACTTTGAGTTGCAGATCGTGGGTGTTG-GCGTCTCCGCTGCTTTACCAGGA---AGGATGGAAGGGGCTT  3396

Query  101  ------CCATTCACGAACCGAGAGGT---CTT-TCAAGATCACACACAGTT--CTACGACA-CA-GACATTTCG  160
                  ||||||.|  ||       |   ||| |||||        .||||  |||.| || || ||..|||| 
Sbjct 3397  CAGCCTCCATTCTC--AC-------TTTCCTTCTCAAG--------GAGTTGGCTAAG-CATCAGGAGTTTTC-  3451

Query  161  TCTT---CTTGCCACTCAGTAGCGGGGCCC--ATCCCT-------------------------CTGTGC-----  199
            ||||   |||  |.||||      ||.|||  .|||||                         .||.||     
Sbjct 3452  TCTTAGGCTT--CTCTCA------GGTCCCCTTTCCCTGAGAGGTGAAAAGTTTTTCAGAAAGGTGAGCAGCTT  3517

Query  200  --------CTCCAAGGGACCACTTCACACACCCCTTTTTCGCCTCCAGAGTAGATGGAACCGTGGAACGAGGGA  265
                    .|||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3518  TCTCTTTATTCCCAGGGACCACTTCACACACCCCTTTTTCGCCTCCAGAGTAGATGGAACCGTGGAACGAGGGA  3591

Query  266  ATCCTGCCCTCTGGTTGTGTCTGTCATCTCCTACTGGGACCAGAGCCACAAAAGCCACAAAAGACCCAACTCTC  339
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3592  ATCCTGCCCTCTGGTTGTGTCTGTCATCTCCTACTGGGACCAGAGCCACAAAAGCCACAAAAGACCCAACTCTC  3665

Query  340  TCCAGCGTGCAGGCATCCCAACTAGAGGAAGCAAGGAGGCAGAGACCAAGAGGACATCAAGAGGCGTTTGAACC  413
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3666  TCCAGCGTGCAGGCATCCCAACTAGAGGAAGCAAGGAGGCAGAGACCAAGAGGACATCAAGAGGCGTTTGAACC  3739

Query  414  CGCAGAGAGGGCCTGGGAGCACAATGCTGAGC------------------------------------------  445
            ||||||||||||||||||||||||||||||||                                          
Sbjct 3740  CGCAGAGAGGGCCTGGGAGCACAATGCTGAGCCCCTTTGATTTCAGGAAGCTGTGGACCGTGTTTAGCCTGTGG  3813

Query  446  --------------------------------------------------------------------------  445
                                                                                      
Sbjct 3814  CTCTGTGTGCCCCTTGGCTGCTGCTGCTGCTTACTCCTGAGGGTGAAGTTGCTAACATAAGAAACGAGTAATTT  3887

Query  446  ----------------GAGAAAGAATTGTGCCA-----------------------------------------  462
                            |||||||||||||||||                                         
Sbjct 3888  GGATTTGCGCTTCTTGGAGAAAGAATTGTGCCATGAAAAATGGAAAACTCCTGAGAAGCTGTTCCAGCGTCAGG  3961

Query  463  --------------------------------------------------------------------------  462
                                                                                      
Sbjct 3962  AGAGCAGCAGACAAGCTGGACTGGGGAAGATTCTTCCTGCAAGACCTGCAGAGTGTATGACACATAACCAGCAC  4035

Query  463  --------------------------------------------------------------------------  462
                                                                                      
Sbjct 4036  CCAAGAAATGTCTACCGAGGAATTAATGAATGAGCCATCTTGTGATCATCTGGCAAGACAGCCCAAGAATAAAG  4109

Query  463  --------------------------------------------------------------------------  462
                                                                                      
Sbjct 4110  CCGTCACCATGGAGACTAAGAAGAGACAGAAAGACACTGGGTCTTCATTGTCTCGTCCAGCTGTTCATGAGGCC  4183

Query  463  --------------------------------------------------------------------------  462
                                                                                      
Sbjct 4184  TTATCTGAAGCCCACGTGACCTCCGGACTACTCACTTACATGAGAGAATAAAGCTCTTTTTTGTTTAGACCAAA  4257

Query  463  --------------------------------------------------------------------------  462
                                                                                      
Sbjct 4258  TAAATACATAATACAATTACATAATCCCTTGATTCCTTTTTATGACTGAGCTCAGAGACTATATTTTGTCATTT  4331

Query  463  --------------------------------------------------------------------------  462
                                                                                      
Sbjct 4332  TAAATCACCTTTGTCTTACAGTTTATTTAACTGAAACAAATAAACAAACCAAAACACGCCAGTTTTTCACTCCT  4405

Query  463  --------------------------------------------------------------------------  462
                                                                                      
Sbjct 4406  CTGTCAAAGCCTTTCCAAGATCACTAAGCTTGTGATGTCCTGGGTGAATGAAGAAGTAACAGTGTTTTCAACAA  4479

Query  463  --------------------------------------------------------------------------  462
                                                                                      
Sbjct 4480  CATAGAAGCTTATTTCTCTCTCATATAAAAGAAGGCTGGAGTCTGGCTGGTATGGGAGATACAGCATCATCAAA  4553

Query  463  --------------------------------------------------------------------------  462
                                                                                      
Sbjct 4554  GTTTTATCTTTTCGTCCTGCCATCCTTAGAATATGGCTTTCATCTTCAAGATCACTTCCTAAGCTATGAGGATG  4627

Query  463  --------------------------------------------------------------------------  462
                                                                                      
Sbjct 4628  CAAAGGTATAAGAATGACATAGCGGACTTTGGGGACTCGGTGTGGGGAGAAGTTGGGAGGGGTGAGGGATAAGA  4701

Query  463  --------------------------------------------------------------------------  462
                                                                                      
Sbjct 4702  GACTACATATTGGGTACAGTGTACACTGCTCTAAAATCTCAGAAATCACCACCAAAGAACCTATCCGTGGAATC  4775

Query  463  ------------------------------------------------------------  462
                                                                        
Sbjct 4776  AAAAACCACCTATACCCCCAAAACCACTGAAATAAAACTAAAAATTAATTAAAAAAAAAA  4835

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