Nucleotide Global Alignment
Description
- Query:
- TRCN0000474909
- Subject:
- XR_945895.1
- Aligned Length:
- 4249
- Identities:
- 1981
- Gaps:
- 2267
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACAAAGCCCGCGCCAGCCTCGGCCGCCCGGCGGGACCCAGAGCCGCCGCGGGAGCTTCCAGCGTCCCCAGGTTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TATAATAATCAAGAAGCACATGAAAGAGGCCTCTTCATCAAGCATTCTTGACTAAGTTATGAAAATGGAATTGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGTTTATTTTCCCCCTTCATATGGTAAGTCCAGCTGTGAGCAGAGTGTTCTGTTCTTCACTTCCAGCAAGCCAG 222
Query 1 ----------ATGGACGCTGACATGGACTACGAAAGACCCAACGTTGAAACTATCAAATGTGTGGTCGTGGGTG 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AGTTTCATAAATGGACGCTGACATGGACTACGAAAGACCCAACGTTGAAACTATCAAATGTGTGGTCGTGGGTG 296
Query 65 ACAATGCCGTGGGGAAGACGCGCTTGATCTGTGCCAGGGCGTGCAACACCACACTCACGCAGTATCAGCTGCTG 138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 ACAATGCCGTGGGGAAGACGCGCTTGATCTGTGCCAGGGCGTGCAACACCACACTCACGCAGTATCAGCTGCTG 370
Query 139 GCCACCCACGTGCCAACAGTGTGGGCGATTGACCAGTACCGCGTGTGCCAGGAGGTCTTGGAGCGTTCTCGGGA 212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GCCACCCACGTGCCAACAGTGTGGGCGATTGACCAGTACCGCGTGTGCCAGGAGGTCTTGGAGCGTTCTCGGGA 444
Query 213 TGTTGTTGATGAAGTGAGTGTTTCTCTCAGGCTTTGGGATACTTTTGGTGATCATCACAAAGACAGACGCTTTG 286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TGTTGTTGATGAAGTGAGTGTTTCTCTCAGGCTTTGGGATACTTTTGGTGATCATCACAAAGACAGACGCTTTG 518
Query 287 CATATGGCAGGTCTGATGTTGTGGTCCTCTGTTTTTCGATTGCTAATCCCAATTCCCTAAATCATGTGAAAAGC 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CATATGGCAGGTCTGATGTTGTGGTCCTCTGTTTTTCGATTGCTAATCCCAATTCCCTAAATCATGTGAAAAGC 592
Query 361 ATGTGGTATCCAGAAATCAAGCACTTTTGCCCTCGAACACCCGTTATCCTTGTTGGGTGCCAGCTTGATCTCCG 434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ATGTGGTATCCAGAAATCAAGCACTTTTGCCCTCGAACACCCGTTATCCTTGTTGGGTGCCAGCTTGATCTCCG 666
Query 435 CTATGCCGACCTGGAAGCTGTTAATCGAGCCAGGCGCCCGTTAGCAAGGCCCATAAAGAGAGGGGATATTTTGC 508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CTATGCCGACCTGGAAGCTGTTAATCGAGCCAGGCGCCCGTTAGCAAGGCCCATAAAGAGAGGGGATATTTTGC 740
Query 509 CCCCAGAAAAAGGCCGAGAGGTAGCAAAGGAACTTGGCTTACCATACTATGAAACAAGCGTGTTTGACCAGTTT 582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CCCCAGAAAAAGGCCGAGAGGTAGCAAAGGAACTTGGCTTACCATACTATGAAACAAGCGTGTTTGACCAGTTT 814
Query 583 GGTATCAAGGATGTGTTTGACAATGCAATCCGAGCAGCGCTGATTTCCCGCAGGCACCTGCAATTCTGGAAATC 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GGTATCAAGGATGTGTTTGACAATGCAATCCGAGCAGCGCTGATTTCCCGCAGGCACCTGCAATTCTGGAAATC 888
Query 657 CCACCTAAAGAAAGTCCAGAAACCTTTACTTCAGGCACCCTTCCTACCTCCAAAAGCCCCTCCACCGGTCATCA 730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CCACCTAAAGAAAGTCCAGAAACCTTTACTTCAGGCACCCTTCCTACCTCCAAAAGCCCCTCCACCGGTCATCA 962
Query 731 AAATTCCAGAGTGTCCTTCCATGGGGACAAATGAAGCTGCCTGTTTACTGGACAATCCTCTATGTGCCGATGTT 804
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 AAATTCCAGAGTGTCCTTCCATGGGGACAAATGAAGCTGCCTGTTTACTGGACAATCCTCTATGTGCCGATGTT 1036
Query 805 CTGTTCATCCTTCAGGACCAGGAACACATCTTTGCACATCGAATTTACCTCGCTACCTCTTCTTCCAAATTTTA 878
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CTGTTCATCCTTCAGGACCAGGAACACATCTTTGCACATCGAATTTACCTCGCTACCTCTTCTTCCAAATTTTA 1110
Query 879 TGATCTGTTTTTAATGGAATGTGAAGAATCCCCAAACGGGAGTGAAGGAGCCTGTGAGAAAGAGAAGCAGAGCA 952
||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||
Sbjct 1111 TGATCTGTTTTTAATGGAATGTGAAGAATCCCCAAATGGGAGTGAAGGAGCCTGTGAGAAAGAGAAGCAGAGCA 1184
Query 953 GAGATTTCCAGGGGCGGATATTGAGTGTCGACCCAGAGGAAGAAAGGGAGGAGGGCCCGCCTAGGATTCCTCAG 1026
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GAGATTTCCAGGGGCGGATATTGAGTGTCGACCCAGAGGAAGAAAGGGAGGAGGGCCCGCCTAGGATTCCTCAG 1258
Query 1027 GCCGACCAGTGGAAGTCTTCAAACAAGAGCCTGGTGGAGGCTCTGGGGCTGGAAGCCGAGGGTGCAGTTCCTGA 1100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 GCCGACCAGTGGAAGTCTTCAAACAAGAGCCTGGTGGAGGCTCTGGGGCTGGAAGCCGAGGGTGCAGTTCCTGA 1332
Query 1101 GACACAGACTTTGACCGGATGGAGTAAGGGGTTCATTGGCATGCACAGGGAAATGCAAGTCAACCCCATTTCAA 1174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GACACAGACTTTGACCGGATGGAGTAAGGGGTTCATTGGCATGCACAGGGAAATGCAAGTCAACCCCATTTCAA 1406
Query 1175 AGCGGATGGGGCCCATGACTGTGGTCAGGATGGACGCTTCAGTCCAGCCAGGCCCTTTTCGGACCCTGCTCCAG 1248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 AGCGGATGGGGCCCATGACTGTGGTCAGGATGGACGCTTCAGTCCAGCCAGGCCCTTTTCGGACCCTGCTCCAG 1480
Query 1249 TTTCTTTATACGGGACAACTGGATGAAAAGGAAAAGGATTTGGTGGGCCTGGCTCAGATCGCAGAGGTCCTCGA 1322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 TTTCTTTATACGGGACAACTGGATGAAAAGGAAAAGGATTTGGTGGGCCTGGCTCAGATCGCAGAGGTCCTCGA 1554
Query 1323 GATGTTCGATTTGAGGATGATGGTGGAAAACATCATGAACAAGGAAGCCTTCATGAACCAGGAGATTACGAAAG 1396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 GATGTTCGATTTGAGGATGATGGTGGAAAACATCATGAACAAGGAAGCCTTCATGAACCAGGAGATTACGAAAG 1628
Query 1397 CCTTTCACGTAAGGAAAGCCAATCGGATAAAAGAGTGTCTCAGCAAGGGAACGTTCTCGGACGTGACATTTAAA 1470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 CCTTTCACGTAAGGAAAGCCAATCGGATAAAAGAGTGTCTCAGCAAGGGAACGTTCTCGGACGTGACATTTAAA 1702
Query 1471 TTGGACGATGGAGCCATCAGTGCCCACAAGCCGCTGCTGATCTGTAGCTGTGAGTGGATGGCAGCCATGTTCGG 1544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 TTGGACGATGGAGCCATCAGTGCCCACAAGCCGCTGCTGATCTGTAGCTGTGAGTGGATGGCAGCCATGTTCGG 1776
Query 1545 GGGGTCATTTGTGGAAAGTGCCAACAGTGAGGTGTATCTCCCGAACATAAACAAGATATCAATGCAAGCAGTAT 1618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 GGGGTCATTTGTGGAAAGTGCCAACAGTGAGGTGTATCTCCCGAACATAAACAAGATATCAATGCAAGCAGTAT 1850
Query 1619 TGGATTATCTCTATACCAAGCAGTTGTCTCCTAACTTGGATCTGGACCCGCTGGAATTAATTGCCTTGGCAAAC 1692
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 TGGATTATCTCTATACCAAGCAGTTGTCTCCTAACTTGGATCTGGACCCGCTGGAATTAATTGCCTTGGCAAAC 1924
Query 1693 AGATTTTGCCTGCCACACTTGGTTGCACTTGCAGAACAGCATGCCGTTCAGGAGTTGACCAAAGCCGCCACGAG 1766
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 AGATTTTGCCTGCCACACTTGGTTGCACTTGCAGAACAGCATGCCGTTCAGGAGTTGACCAAAGCCGCCACGAG 1998
Query 1767 TGGCGTGGGCATTGACGGAGAAGTGCTCTCTTACTTGGAATTGGCTCAGTTTCACAATGCCCACCAGTTGGCCG 1840
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 TGGCGTGGGCATTGACGGAGAAGTGCTCTCTTACTTGGAATTGGCT---------------------------- 2044
Query 1841 CCTGGTGTTTGCACCACATCTGCACCAACTACAACAGTGTATGCTCCAAGTTCCGTAAGGAAATCAAATCAAAA 1914
Sbjct 2045 -------------------------------------------------------------------------- 2044
Query 1915 TCTGCAGACAACCAGGAATACTTCGAGCGGCACCGCTGGCCCCCTGTGTGGTACCTGAAGGAAGAAGATCACTA 1988
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2045 ----CAGACAACCAGGAATACTTCGAGCGGCACCGCTGGCCCCCTGTGTGGTACCTGAAGGAAGAAGATCACTA 2114
Query 1989 CCAGCGTGTGAAAAGGGAACGAGAGAAGGAAGATATTGCACTAAATAAGCATCGCTCAAGACGAAAGTGGTGCT 2062
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2115 CCAGCGTGTGAAAAGGGAACGAGAGAAGGAAGATATTGCACTAAATAAGCATCGCTCAAGACGAAAGTGGTGCT 2188
Query 2063 TCTGGAATTCATCTCCAGCAGTGGCC------------------------------------------------ 2088
||||||||||||||||||||||||||
Sbjct 2189 TCTGGAATTCATCTCCAGCAGTGGCCTGAAGAGGAAGAGAAAAAAAACAAAAAACAGAAACCAATCGGATCAAA 2262
Query 2089 -------------------------------------------------------------------------- 2088
Sbjct 2263 GCACAAGCTCACCATCAATGAGCCTGGACAAAAAGGGAAGCTGACTCTCACTGCATTCCTTAAACTGATATGTA 2336
Query 2089 -------------------------------------------------------------------------- 2088
Sbjct 2337 TATTTTTTTTGTTAGGAGGCTTAATAAACTTTAGTCTGTTATTTTGTTTCTTTTTATACAAAGAAAAAAAATTC 2410
Query 2089 -------------------------------------------------------------------------- 2088
Sbjct 2411 AGCTTTCATGTTTCTGATTCCAGATTGGAAAATATTTTTATATGGTCTGTTGTATTTTGTTGAAATGAAAATAC 2484
Query 2089 -------------------------------------------------------------------------- 2088
Sbjct 2485 TGTGTATTACTTTATTTTACAGGCCACAATTGATTATGAAGTCACCCTGTGATTCTCTTTGCCCACATGACCAC 2558
Query 2089 -------------------------------------------------------------------------- 2088
Sbjct 2559 CGAGCATTATTACGTAATTAGAGGGTTATCCTTTTGTTGTGAAAGGAAGGAGGGGACTGAAATCTCCCAAAGTG 2632
Query 2089 -------------------------------------------------------------------------- 2088
Sbjct 2633 CAAATTGGAGAGTGTTTAATCTTTGTTCTGTTGAATAACATCGGTGTAATTACAAAGTCAACTCCAAGAATGTG 2706
Query 2089 -------------------------------------------------------------------------- 2088
Sbjct 2707 TATTTACAATATTTGCCATGTTAAGTGCTGGTAATTATATGGTTATATGTGCCATGTAAAATATAGTGATATCA 2780
Query 2089 -------------------------------------------------------------------------- 2088
Sbjct 2781 AATATTCTGTTGTTTCCAATGTCTAGTTTCAAGAGGACAATCTTTATAATCATTAGAAGGGCTTATTAAATCCC 2854
Query 2089 -------------------------------------------------------------------------- 2088
Sbjct 2855 AGCATTATCCAGGGCAAACTCACTGGTGGACCTGAATACATAAGATACCATTAGTGCGCTGGTGTTCGGATTGC 2928
Query 2089 -------------------------------------------------------------------------- 2088
Sbjct 2929 TGTATTAGGGTTTACATCTCTCAGTATTCCTTGAACTTGCCATGCTTCTGCATGCAGATTCTTCACTGACTTGA 3002
Query 2089 -------------------------------------------------------------------------- 2088
Sbjct 3003 ATTGAGATGGGCAAGGGAAAAGGTCCCTGGACTCCCTCCTGCCATCTACAGGCTTGTCACATCTCACCACCAGA 3076
Query 2089 -------------------------------------------------------------------------- 2088
Sbjct 3077 AACAGGCTTCCTCAGGCTTCTCACCTGTGGCCAACTTCACTTTGTAAGACCCATATTTTTAACTCTTCCCAGGG 3150
Query 2089 -------------------------------------------------------------------------- 2088
Sbjct 3151 AAAATTCATGTTGCTGCAGAAGTAGGCTAAGGCAGACCACCCACTTCTGCTGAAATGCATTGGGAGCCTGTGAA 3224
Query 2089 -------------------------------------------------------------------------- 2088
Sbjct 3225 AGCACAAAGCTGGAGGCTGGGCGCCTGCGTTCTCCTACACGGAAAGGAATCTAATTCCAAGAGTCTAGGAAATG 3298
Query 2089 -------------------------------------------------------------------------- 2088
Sbjct 3299 GTGCTATTGTGAGTTCGTTCTGACTCTTTCTCATTCTGAGTTTTCAGTGTTAAACTAGGAAGTGTGACAGCAGG 3372
Query 2089 -------------------------------------------------------------------------- 2088
Sbjct 3373 GGAGCTTTCGTGAGGCAGTCAGTCATTGCTTCTCTGTAAATTAAAATGTTACAGCACACACATACACACACAGA 3446
Query 2089 -------------------------------------------------------------------------- 2088
Sbjct 3447 GAGCATTTCAAGGCCACAGCTCCACACCTGCCATGGGATGTTAATGTGGCAGGGGGTGGGGCTCATTCTGTTGG 3520
Query 2089 -------------------------------------------------------------------------- 2088
Sbjct 3521 GAGGTCAAATTACCAATGCCAAGGACTGTTGATTTTGTTTTTATTTTTATTTTTTCTTCTAGCTTTTCAGAAGA 3594
Query 2089 -------------------------------------------------------------------------- 2088
Sbjct 3595 TGGAAATGAGACAGTTGAGTCCAAACCCCAATGCTGACAGCCATATGCATTTGAAAATCTATCTAGATTACAGA 3668
Query 2089 -------------------------------------------------------------------------- 2088
Sbjct 3669 TGGGCATTTATTACTGGCAGTGGAAACACCAGATAGAAGATCTTAGGAGAGGCCCAGAAATGCATCACCTTGTC 3742
Query 2089 -------------------------------------------------------------------------- 2088
Sbjct 3743 ATGACAAAAGAGAAGGCAGTAGAGTAGGGATAGTTACAAATGCATCCATCTTAATTATTTTCAATAGGCTTGTA 3816
Query 2089 -------------------------------------------------------------------------- 2088
Sbjct 3817 AATCTTATCGATGGAAGGAGAAAGGAGACAAGATGTGGAAGAATTGACATGTATCCCACCATAAAATGGTAGAA 3890
Query 2089 -------------------------------------------------------------------------- 2088
Sbjct 3891 GATGAGTTTTCAATGAGTAGTCATAGTTGAAATTTTACAACCAAAGCTCCCATTTGATTGTAATCTTGCCAAAA 3964
Query 2089 -------------------------------------------------------------------------- 2088
Sbjct 3965 TATAATGGATGTATAAATGAACTTGGGGTATAAGCAATAATATCCACTAGTGTTGTTATCAGCTACTGTAACCA 4038
Query 2089 -------------------------------------------------------------------------- 2088
Sbjct 4039 AGTGGCTGGTTCATTTGGTTGATGCTGATTATGGCCTTTAACCATGGTGGTTTGTTGTGTGTTTTTTATTTCAC 4112
Query 2089 ------------------------------- 2088
Sbjct 4113 AAAAAGCCAATAAAATTGTTTAGCTATAAAA 4143
