Nucleotide Global Alignment
Description
- Query:
- TRCN0000475171
- Subject:
- XM_017008464.2
- Aligned Length:
- 3084
- Identities:
- 1513
- Gaps:
- 1569
Alignment
Query 1 ATGAATCTTTTCAACCTGGACCGTTTTCGCTTTGAGAAAAGGAATAAGATTGAGGAAGCGCCCGAAGCAACCCC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 TCAACCTTCCCAGCCTGGCCCTTCTTCACCAATTTCTCTTAGTGCTGAAGAGGAGAATGCTGAAGGGGAAGTTA 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 GCAGGGCAAACACTCCTGATTCAGATATAACTGAAAAAACAGAAGATTCTAGTGTTCCAGAAACTCCAGATAAT 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GAAAGAAAAGCAAGTATATCATATTTCAAAAATCAAAGAGGAATACAGTATATTGATTTGTCTTCTGATAGTGA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 AGATGTCGTTTCCCCAAATTGCTCCAATACAGTTCAAGAGAAAACATTCAACAAAGATACAGTGATTATAGTTT 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 CTGAGCCATCTGAAGATGAAGAGTCCCAAGGCCTTCCTACCATGGCACGTAGAAATGATGATATTTCAGAACTG 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 GAAGACCTTTCGGAATTGGAAGACCTTAAAGATGCTAAACTTCAGACTTTGAAGGAACTTTTTCCACAAAGAAG 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 TGACAATGATTTACTTAAGTTGATTGAATCAACAAGCACTATGGATGGAGCAATTGCTGCTGCCTTGCTGATGT 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 TTGGTGATGCAGGTGGTGGGCCCAGGAAAAGAAAATTATCTTCTTCTTCAGAGCCATATGAGGAAGATGAATTT 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 AATGATGATCAATCTATAAAAAAGACAAGACTGGATCATGGAGAGGAATCAAATGAGTCTGCAGAATCTAGCAA 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 TAATTGGGAAAAGCAGGAAAGTATTGTACTGAAATTGCAAAAGGAATTTCCCAATTTTGATAAACAGGAACTTA 814
Sbjct 1 -------------------------------------------------------------------------- 0
Query 815 GAGAAGTACTCAAGGAACATGAATGGATGTACACAGAAGCTTTAGAATCTCTAAAAGTGTTTGCAGAAGACCAA 888
Sbjct 1 -------------------------------------------------------------------------- 0
Query 889 GATATGCAATATGCATCACAAAGTGAGGTTCCAAATGGAAAAGAAGTTTCTTCAAGAAGTCAAAATTACCCTAA 962
Sbjct 1 -------------------------------------------------------------------------- 0
Query 963 AAATGCAACTAAAACAAAACTAAAACAGAAATTTTCAATGAAAGCACAAAATGGCTTTAACAAGAAACGTAAAA 1036
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1037 AAAATGTTTTTAATCAAAAGAGAGTTGTTGAAGACTCTGAATATGATTCAGGTTCTGATGTCGGTAGTTCACTA 1110
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1111 GATGAGGACTATAGTAGTGGTGAAGAAGTGATGGAGGATGGCTATAAAGGTAAAATTCTTCACTTCCTTCAAGA 1184
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1185 TGCTTCAATTGGTGAACTTACTTTGATTCCTCAGTGTTCTCAGAAAAAGGCTCAGAAGATAACAGAACTCCGGC 1258
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1259 CCTTTAATAGTTGGGAGGCTCTGTTCACAAAGATGTCCAAAACTAATGGCTTATCAGAAGATTTGATATGGCAC 1332
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1333 TGTAAAACACTGATCCAAGAAAGAGATGTAGTTATAAGGCTTATGAACAAATGTGAAGACATTTCAAATAAATT 1406
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1407 GACCAAACAAGTTACCATGCTTACTGGAAATGGAGGTGGATGGAACATAGAACAACCTTCCATTCTAAACCAGA 1480
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1481 GTTTGTCACTCAAGCCCTATCAGAAGGTTGGTTTGAATTGGCTGGCATTGGTACATAAACATGGACTTAATGGC 1554
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1555 ATTTTGGCAGATGAAATGGGCCTAGGAAAAACTATTCAAGCCATTGCATTTCTGGCATACCTCTATCAGGAGGG 1628
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ---------------ATGGGCCTAGGAAAAACTATTCAAGCCATTGCATTTCTGGCATACCTCTATCAGGAGGG 59
Query 1629 TAATAATGGTCCTCATTTGATCGTTGTTCCAGCTTCAACTATAGATAACTGGTTAAGGGAAGTTAATTTATGGT 1702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 60 TAATAATGGTCCTCATTTGATCGTTGTTCCAGCTTCAACTATAGATAACTGGTTAAGGGAAGTTAATTTATGGT 133
Query 1703 GCCCTACTTTGAAGGTCCTCTGTTACTATGGTTCTCAAGAAGAACGTAAACAAATTAGATTTAACATTCATAGT 1776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 134 GCCCTACTTTGAAGGTCCTCTGTTACTATGGTTCTCAAGAAGAACGTAAACAAATTAGATTTAACATTCATAGT 207
Query 1777 AGATATGAAGATTACAATGTAATTGTGACCACATATAACTGTGCGATCAGCAGTTCTGATGATCGTAGTCTGTT 1850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||
Sbjct 208 AGATATGAAGATTACAATGTAATTGTGACCACATATAACTGTGCGATCAGCAGTTCTGATGACCGTAGTCTGTT 281
Query 1851 TCGACGGCTGAAACTTAATTACGCAATTTTTGATGAGGGCCATATGCTGAAGAATATGGGCTCCATTCGCTACC 1924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 282 TCGACGGCTGAAACTTAATTACGCAATTTTTGATGAGGGCCATATGCTGAAGAATATGGGCTCCATTCGCTACC 355
Query 1925 AGCACCTTATGACAATTAATGCAAATAACCGTTTGCTGCTCACAGGCACACCTGTACAGAACAATCTGTTAGAA 1998
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 356 AGCACCTTATGACAATTAATGCAAATAACCGTTTGCTGCTCACAGGCACACCTGTACAGAACAATCTGTTAGAA 429
Query 1999 CTCATGTCGCTGTTGAATTTTGTTATGCCACACATGTTTAGTAGTAGCACCAGTGAAATACGAAGAATGTTTTC 2072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 430 CTCATGTCGCTGTTGAATTTTGTTATGCCACACATGTTTAGTAGTAGCACCAGTGAAATACGAAGAATGTTTTC 503
Query 2073 CTCTAAGACAAAATCAGCAGATGAGCAAAGCATATATGAAAAGGAGAGAATAGCACATGCAAAACAAATTATAA 2146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 504 CTCTAAGACAAAATCAGCAGATGAGCAAAGCATATATGAAAAGGAGAGAATAGCACATGCAAAACAAATTATAA 577
Query 2147 AGCCATTTATTCTCAGAAGAGTAAAAGAAGAGGTTCTCAAGCAGTTACCCCCCAAGAAAGATCGAATTGAGTTG 2220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 578 AGCCATTTATTCTCAGAAGAGTAAAAGAAGAGGTTCTCAAGCAGTTACCCCCCAAGAAAGATCGAATTGAGTTG 651
Query 2221 TGTGCAATGTCGGAGAAGCAGGAGCAACTCTATTTGGGTCTTTTCAACAGATTGAAAAAATCTATCAATAACTT 2294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 652 TGTGCAATGTCGGAGAAGCAGGAGCAACTCTATTTGGGTCTTTTCAACAGATTGAAAAAATCTATCAATAACTT 725
Query 2295 GGTCACAGAAAAAAACACAGAAATGTGCAATGTCATGATGCAGTTGAGGAAAATGGCCAATCATCCTTTATTAC 2368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 726 GGTCACAGAAAAAAACACAGAAATGTGCAATGTCATGATGCAGTTGAGGAAAATGGCCAATCATCCTTTATTAC 799
Query 2369 ATCGCCAATATTACACAGCTGAAAAACTCAAGGAAATGTCTCAGCTTATGCTAAAGGAACCTACACATTGTGAG 2442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 800 ATCGCCAATATTACACAGCTGAAAAACTCAAGGAAATGTCTCAGCTTATGCTAAAGGAACCTACACATTGTGAG 873
Query 2443 GCTAACCCTGACCTGATCTTTGAAGATATGGAAGTTATGACAGACTTCGAACTACATGTACTTTGTAAACAGTA 2516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 874 GCTAACCCTGACCTGATCTTTGAAGATATGGAAGTTATGACAGACTTCGAACTACATGTACTTTGTAAACAGTA 947
Query 2517 CCGACACATTAATAACTTTCAGTTAGACATGGACTTGATTTTAGATTCTGGAAAATTTCGAGTTTTAGGATGCA 2590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 948 CCGACACATTAATAACTTTCAGTTAGACATGGACTTGATTTTAGATTCTGGAAAATTTCGAGTTTTAGGATGCA 1021
Query 2591 TCTTGTCTGAATTGAAACAGAAGGGTGATAGAGTTGTGTTATTTAGCCAATTTACCATGATGCTGGATATCTTA 2664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1022 TCTTGTCTGAATTGAAACAGAAGGGTGATAGAGTTGTGTTATTTAGCCAATTTACCATGATGCTGGATATCTTA 1095
Query 2665 GAGGTTCTATTAAAACATCATCAGCATAGGTACCTCAGATTAGATGGAAAGACTCAGATTTCTGAAAGGATTCA 2738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1096 GAGGTTCTATTAAAACATCATCAGCATAGGTACCTCAGATTAGATGGAAAGACTCAGATTTCTGAAAGGATTCA 1169
Query 2739 TCTAATTGATGAGTTTAATACCGATATGGATATCTTTGTGTTTCTGCTATCAACAAAAGCTGGTGGATTAGGAA 2812
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1170 TCTAATTGATGAGTTTAATACCGATATGGATATCTTTGTGTTTCTGCTATCAACAAAAGCTGGTGGATTAGGAA 1243
Query 2813 TAAATCTGACTTCAGCAAATGTTGTTATACTTCACGATATTGACTGTAATCCTTATAATGACAAACAAGCAGAA 2886
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1244 TAAATCTGACTTCAGCAAATGTTGTTATACTTCACGATATTGACTGTAATCCTTATAATGACAAACAAGCAGAA 1317
Query 2887 GATAGATGCCATAGAGTAGGCCAGACTAAAGAAGCACTAGTTATAAAACTAATAAGCCAAGGGACGATTGAAGA 2960
||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||
Sbjct 1318 GATAGATGCCATAGAGTAGGCCAGACTAAAGAAGTACTAGTTATAAAACTAATAAGCCAAGGGACGATTGAAGA 1391
Query 2961 ATCCATGCTAAAAATTAACCAACAGAAATTGAAACTAGAACAGGATATGACTACAGTAGATGAAGGTGATGAAG 3034
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1392 ATCCATGCTAAAAATTAACCAACAGAAATTGAAACTAGAACAGGATATGACTACAGTAGATGAAGGTGATGAAG 1465
Query 3035 GGAGTATGCCAGCAGATATAGCCACATTACTAAAAACATCAATGGGCCTG 3084
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1466 GGAGTATGCCAGCAGATATAGCCACATTACTAAAAACATCAATGGGCCTG 1515
