Nucleotide Global Alignment

Description

Query:
TRCN0000475263
Subject:
XM_006519407.3
Aligned Length:
5181
Identities:
854
Gaps:
4263

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGAGGAGATTGGCTTTTCGAGGCGCTGGTTGTGCTCTGAAGAAGTTGGATTCCATGGGTTCCAAGAGAAGAAG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AGCCACCTCTCCTTCCAGCAGTGTCAGTGGAGACTTTGATGACGGGCACCATTCTGTGCCTACACCAGGCCCAA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCAGGAAAAGGAGAAGACTGTCCAATCTTCCAACTGTAGATCCTATTGCTGTGTGCCATGAACTCTATAACACC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ATCCGAGACTATAAGGATGAACAGGGCAGACTCCTCTGTGAGCTGTTCATTAGGGCTCCAAAGCGGAGAAATCA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  ACCAGACTATTATGAAGTGGTTTCTCAGCCCATTGACTTGATGAAAATCCAACAGAAACTTAAAATGGAAGAGT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  ATGATGATGTTAATCTACTGACTGCTGACTTCCAGCTGCTTTTTAACAATGCAAAGGCCTACTATAAGCCAGAT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TCCCCTGAGTATAAAGCTGCTTGTAAACTCTGGGATTTGTACCTTCGAACAAGAAATGAGTTTGTTCAGAAAGG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  AGAAGCAGACGATGAAGATGATGACGAAGATGGGCAAGACAATCAAGGCACACTGGCTGACGGCTCTTCTCCAG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GTTATCTGAAGGAGATCCTGGAGCAGCTTCTTGAAGCCATAGTTGTAGCCACAAATCCATCAGGACGGCTCATC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  AGTGAACTTTTTCAGAAACTGCCTTCCAAAGTGCAATATCCAGACTATTATGCAATAATTAAGGAACCTATAGA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TCTCAAGACCATTGCTCAGAGGATACAGAATGGAAGCTACAAAAGTATACACGCAATGGCCAAAGATATAGATC  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TTCTAGCAAAAAATGCCAAAACATACAATGAGCCTGGGTCTCAAGTATTCAAGGATGCCAATTCGATTAAAAAA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  ATATTTTATATGAAAAAGGCAGAAATTGAACATCATGAAATGACTAAATCAAGTCTTCGAATAAGGACTGCATC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AAATTTGGCTGCAGCCAGGCTGACAGGTCCTTCGCACAATAAAAGCAGCCTTGGTGAAGAAAGAAACCCCACTA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  GCAAGTATTACCGTAATAAAAGAGCAGTCCAAGGGGGTCGCTTGTCAGCAATTACCATGGCACTTCAGTATGGA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TCAGAGAGTGAAGAGGACGCTGCTTTAGCTGCTGCACGCTATGAAGAAGGGGAATCTGAAGCAGAGAGCATCAC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TTCCTTCATGGACGTTTCCAACCCCTTTCATCAGCTTTACGACACAGTTAGGAGCTGTAGGAATCACCAAGGGC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  AGCTCATAGCTGAACCTTTCTTCCATTTGCCTTCAAAGAAAAAATACCCAGATTATTATCAGCAAATTAAAATG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  CCCATATCACTTCAACAGATCAGAACAAAGCTAAAGAACCAAGAATATGAAACTTTAGATCATTTGGAGTGTGA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TCTGAATTTAATGTTTGAAAATGCCAAACGTTATAACGTTCCCAATTCAGCCATCTATAAGCGAGTTCTAAAAC  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  TGCAGCAAGTCATGCAGGCAAAGAAGAAGGAGCTTGCGAGGAGAGATGACATTGAGGACGGAGACAGCATGATC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  TCCTCAGCCACTTCTGACACTGGTAGTGCCAAAAGGAAAAGGAATACTCATGACAGTGAGATGTTGGGTCTCAG  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  GAGGCTATCCAGTAAAAAGAACATAAGAAAACAGCGAATGAAAATTTTATTCAATGTTGTTCTTGAAGCTCGAG  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  AGCCAGGTTCAGGCAGAAGACTTTGCGATCTATTTATGGTTAAGCCATCCAAGAAGGACTATCCTGATTATTAT  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  AAAATCATCTTAGAGCCAATGGACCTGAAAATAATTGAGCATAACATCCGAAATGACAAATATGCAGGTGAAGA  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  AGGAATGATGGAAGACATGAAACTCATGTTCCGCAATGCCAGGCACTACAATGAGGAGGGCTCCCAGGTATACA  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  ATGATGCCCATATCCTGGAGAAGTTACTCAAAGATAAAAGGAAAGAGCTGGGCCCTCTGCCTGATGATGATGAC  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  ATGGCTTCTCCCAAACTTAAATTGAGTAGGAAGAGTGGTGTTTCTCCTAAGAAATCAAAGTACATGACTCCAAT  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  GCAGCAGAAACTGAATGAAGTGTATGAAGCTGTAAAGAACTATACTGATAAGAGGGGTCGCCGCCTTAGTGCTA  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  TATTTCTAAGACTCCCCTCTAGATCAGAGCTGCCTGACTACTACCTGACCATTAAAAAGCCCATGGACATGGAA  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  AAAATTCGAAGTCACATGATGGCAAACAAGTACCAAGACATAGATTCTATGGTAGAGGACTTTGTCATGATGTT  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  TAATAATGCCTGTACCTACAATGAACCAGAGTCTTTGATCTACAAAGATGCCCTTGTACTGCATAAAGTCCTCC  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  TTGAGACTCGGAGAGACCTGGAGGGAGATGAGGATTCTCATGTCCCTAATGTGACGTTGCTGATTCAAGAGCTC  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  ATCCATAACCTTTTTGTGTCAGTCATGAGTCATCAGGATGACGAAGGGAGGTGTTACAGCGACTCCTTAGCAGA  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  AATTCCTGCTGTGGATCCCAACTCTCCCAATAAACCTCCCCTTACATTTGACATTATCAGGAAAAATGTTGAAA  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  GTAATCGGTATCGGCGACTTGATTTATTTCAGGAGCATATGTTTGAAGTATTGGAACGGGCAAGAAGGATGAAC  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  CGGACAGATTCCGAAATATATGAGGATGCTGTAGAACTTCAGCAGTTTTTTATTAGAATTCGTGATGAACTCTG  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  CAAAAATGGAGAGATCCTTCTTTCTCCAGCACTCAGCTATACCACAAAACACTTGCATAACGATGTGGAAAAAG  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  AAAAAAAGGAAAAATTGCCTAAAGAAATAGAGGAAGATAAACTAAAACGCGAAGAAGAAAAAAGAGAAGCTGAA  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  AAAAGTGAAGATTCCTCAGGTACTACAGGCCTCTCAGGCTTACATCGTACATACAGCCAGGACTGCAGCTTTAA  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  GAACAGCATGTATCATGTCGGAGATTATGTCTATGTTGAACCTGCGGAGGCCAATCTACAACCACATATAGTGT  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  GTATTGAGAGACTGTGGGAGGATTCAGCTGGTGAAAAATGGTTGTACGGCTGTTGGTTTTATCGGCCAAATGAA  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  ACATTCCATTTGGCTACACGAAAATTTCTAGAAAAAGAAGTTTTTAAGAGTGACTACTACAATAAAGTACCTGT  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  TAGTAAAATTCTAGGCAAATGTGTAGTCATGTTTGTCAAGGAATACTTTAAATTATGTCCAGAAAACTTTCGCG  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  ATGAGGATGTTTTTGTCTGTGAATCGAGGTATTCTGCCAAAACCAAATCTTTTAAGAAAATTAAACTGTGGACC  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  ATGCCCATCAGTTCAGTTAGATTTGTCCCTCGGGATGTGCCTTTGCCTGTGGTCCGAGTGGCCTCTGTGTTTGC  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  AAATGCAGATAAAGGGGATGATGAGAAGAATACAGACAACTCAGATGACAATAGAGCTGAAGACAATTTTAACT  3478

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3479  TGGAAAAGGAAAAAGAAGATGTTCCTGTGGAGATGTCCAATGGTGAGCCAGGTTGCCACTACTTTGAGCAGCTT  3552

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3553  CGGTACAATGACATGTGGCTGAAGGTTGGTGATTGTGTCTTCATCAAATCCCACGGCTTGGTGCGCCCTCGTGT  3626

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3627  GGGCAGAATTGAGAAAGTATGGGTCCGAGATGGAGCTGCATATTTTTATGGCCCTATCTTCATTCATCCAGAAG  3700

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3701  AAACAGAACATGAGCCCACAAAAATGTTCTACAAAAAAGAAGTGTTTCTGAGTAATCTGGAAGAGACCTGCCCT  3774

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3775  ATGAGTTGTATTCTGGGGAAATGTGCAGTGCTGTCATTCAAGGACTTCCTCTCCTGCAGGCCAACTGAAATACC  3848

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3849  AGAAAATGACATTCTGCTTTGTGAGAGCCGCTATAATGAGAGTGACAAGCAGATGAAGAAGTTCAAGGGTTTGA  3922

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3923  AGAGGTTTTCACTCTCTGCTAAAGTTGTAGATGATGAAATCTACTACTTCAGAAAACCAATCATTCCTCAGAAG  3996

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3997  GAACCCTCACCTTTGTTAGAAAAGAAGATACAATTGCTAGAAGCTAAATTTGCAGAGTTAGAAGGAGGAGATGA  4070

Query    1  -------------ATGGGAGAAGAAGATAGTGAGGTCATTGAACCTCCTTCTCTACCTCAGCTTCAGACCCCCC  61
                         |||||||||||.||||||||.|||||||||.||||.|||||||||||.||.|||||.||||
Sbjct 4071  TGATATTGAGGAGATGGGAGAAGAGGATAGTGAAGTCATTGAAGCTCCATCTCTACCTCAACTGCAGACACCCC  4144

Query   62  TGGCCAGTGAGCTGGACCTCATGCCCTACACACCCCC---------------ACAGTCTACCCCAAAGTCTGCC  120
            ||||||.||||.||||||||||||||||.||||||||               ||||||||||||||||||||||
Sbjct 4145  TGGCCAATGAGTTGGACCTCATGCCCTATACACCCCCACAGCTTTCTGTCTTACAGTCTACCCCAAAGTCTGCC  4218

Query  121  AAAGGCAGTGCAAAGAAGGAAGGCTCCAAACGGAAAATCAACATGAGTGGCTACATCCTGTTCAGCAGTGAGAT  194
            |||||||||||||||||||||.|.||.|||||.|||||||||||||||||||||||..|||||||||||||.||
Sbjct 4219  AAAGGCAGTGCAAAGAAGGAAAGTTCTAAACGAAAAATCAACATGAGTGGCTACATTTTGTTCAGCAGTGAAAT  4292

Query  195  GAGGGCTGTGATTAAGGCCCAACACCCAGACTACTCTTTCGGGGAGCTCAGCCGCCTGGTGGGGACAGAATGGA  268
            |||.|||||||||||.|||||.|||||||||||||||||.||||||||||||.|.|||||||||||||||||||
Sbjct 4293  GAGAGCTGTGATTAAAGCCCAGCACCCAGACTACTCTTTTGGGGAGCTCAGCAGACTGGTGGGGACAGAATGGA  4366

Query  269  GAAATCTTGAGACAGCCAAGAAAGCAGAATATGA----------------------------------------  302
            ||||.|||||.|||||||||||||||||||||||                                        
Sbjct 4367  GAAACCTTGAAACAGCCAAGAAAGCAGAATATGAAGAGCGGGCAGCTAAAGTTGCTGAGCAGCAGGAGAGAGAG  4440

Query  303  --------------------------------------------------------------------------  302
                                                                                      
Sbjct 4441  CGAGCAGCACAGCAACAGCAGCCGAGTGCTTCTCCCCGAGCAGGCACCCCTGTGGGGGCTCTCATGGGGGTGGT  4514

Query  303  ---------------------------------------------------AGGCATGATGGGTGGCTATCCGC  325
                                                               |||||||||||||||||||||||
Sbjct 4515  GCCACCACCAACACCAATGGGGATGCTCAATCAGCAGTTGACACCTGTTGCAGGCATGATGGGTGGCTATCCGC  4588

Query  326  CAGGCCTTCCACCTTTGCAGGGCCCAGTTGATGGCCTTGTTAGCATGGGCAGCATGCAGCCACTTCACCCTGGG  399
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4589  CAGGCCTTCCACCTTTGCAGGGCCCAGTTGATGGCCTTGTTAGCATGGGCAGCATGCAGCCACTTCACCCTGGG  4662

Query  400  GGGCCTCCACCCCACCATCTTCCGCCAGGTGTGCCTGGCCTCCCGGGCATCCCACCACCGGGTGTGATGAACCA  473
            |||||||||||.||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||.||
Sbjct 4663  GGGCCTCCACCTCACCATCTTCCGCCAGGTGTGCCTGGCCTCCCAGGCATCCCACCACCGGGTGTGATGAATCA  4736

Query  474  AGGAGTGGCCCCTATGGTAGGGACTCCAGCACCAGGTGGAAGTCCATATGGACAACAGGTGGGAGTTTTGGGGC  547
            ||||||.|||||.||||||||||||||||||||||||||||||||.||||||||||||||.|||||||||||.|
Sbjct 4737  AGGAGTAGCCCCCATGGTAGGGACTCCAGCACCAGGTGGAAGTCCGTATGGACAACAGGTAGGAGTTTTGGGAC  4810

Query  548  CTCCAGGGCAGCAGGCACCACCTCCATATCCCGGCCCACATCCAGCTGGACCCCCTGTCATACAGCAGCCAACA  621
            |||||||||||||||||||||||||||||||.||.||.|||||||||||.||||||||||||||||||||||||
Sbjct 4811  CTCCAGGGCAGCAGGCACCACCTCCATATCCTGGTCCTCATCCAGCTGGCCCCCCTGTCATACAGCAGCCAACA  4884

Query  622  ACACCCATGTTTGTAGCTCCCCCACCAAAGACCCAGCGGCTTCTTCACTCAGAGGCCTACCTGAAATACATTGA  695
            ||.|||||||||||.||||||||||||||||||||..|||||||.|||||||||||||||||||||||||||||
Sbjct 4885  ACGCCCATGTTTGTGGCTCCCCCACCAAAGACCCAAAGGCTTCTCCACTCAGAGGCCTACCTGAAATACATTGA  4958

Query  696  AGGACTCAGTGCGGAGTCCAACAGCATTAGCAAGTGGGATCAGACACTGGCAGCTCGAAGACGCGACGTCCATT  769
            ||||||||||||.||.|||||||||||||||||||||||.||.||..||||||||||||||||.||.|||||||
Sbjct 4959  AGGACTCAGTGCTGAATCCAACAGCATTAGCAAGTGGGACCAAACTTTGGCAGCTCGAAGACGGGATGTCCATT  5032

Query  770  TGTCGAAAGAACAGGAGAGCCGCCTACCCTCTCACTGGCTGAAAAGCAAAGGGGCCCACACCACCATGGCAGAT  843
            ||||.|||||||||||||||||||||||.|||||||||||.|||||.||||||||.||||||||||||||||||
Sbjct 5033  TGTCCAAAGAACAGGAGAGCCGCCTACCTTCTCACTGGCTCAAAAGTAAAGGGGCACACACCACCATGGCAGAT  5106

Query  844  GCCCTCTGGCGCCTTCGAGATTTGATGCTCCGGGACACCCTCAACATTCGCCAAGCATACAACCTAGAAAATGT  917
            ||||||||||||||.||.|||||.|||||.||.|||||.||||||||.||.||.||||||||||||||||||||
Sbjct 5107  GCCCTCTGGCGCCTACGGGATTTAATGCTTCGAGACACTCTCAACATCCGACAGGCATACAACCTAGAAAATGT  5180

Query  918  T  918
            |
Sbjct 5181  T  5181

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