Nucleotide Global Alignment
Description
- Query:
- TRCN0000475263
- Subject:
- XM_006519410.3
- Aligned Length:
- 5145
- Identities:
- 854
- Gaps:
- 4227
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGGAGATTGGCTTTTCGAGGCGCTGGTTGTGCTCTGGTAAAGCTGAAGAAGTTGGATTCCATGGGTTCCAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GAGAAGAAGAGCCACCTCTCCTTCCAGCAGTGTCAGTGGAGACTTTGATGACGGGCACCATTCTGTGCCTACAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CAGGCCCAAGCAGGAAAAGGAGAAGACTGTCCAATCTTCCAACTGTAGATCCTATTGCTGTGTGCCATGAACTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TATAACACCATCCGAGACTATAAGGATGAACAGGGCAGACTCCTCTGTGAGCTGTTCATTAGGGCTCCAAAGCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAGAAATCAACCAGACTATTATGAAGTGGTTTCTCAGCCCATTGACTTGATGAAAATCCAACAGAAACTTAAAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGGAAGAGTATGATGATGTTAATCTACTGACTGCTGACTTCCAGCTGCTTTTTAACAATGCAAAGGCCTACTAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAGCCAGATTCCCCTGAGTATAAAGCTGCTTGTAAACTCTGGGATTTGTACCTTCGAACAAGAAATGAGTTTGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCAGAAAGGAGAAGCAGACGATGAAGATGATGACGAAGATGGGCAAGACAATCAAGGCACACTGGCTGACGGCT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTTCTCCAGGTTATCTGAAGGAGATCCTGGAGCAGCTTCTTGAAGCCATAGTTGTAGCCACAAATCCATCAGGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CGGCTCATCAGTGAACTTTTTCAGAAACTGCCTTCCAAAGTGCAATATCCAGACTATTATGCAATAATTAAGGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ACCTATAGATCTCAAGACCATTGCTCAGAGGATACAGAATGGAAGCTACAAAAGTATACACGCAATGGCCAAAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ATATAGATCTTCTAGCAAAAAATGCCAAAACATACAATGAGCCTGGGTCTCAAGTATTCAAGGATGCCAATTCG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATTAAAAAAATATTTTATATGAAAAAGGCAGAAATTGAACATCATGAAATGACTAAATCAAGTCTTCGAATAAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GACTGCATCAAATTTGGCTGCAGCCAGGCTGACAGGTCCTTCGCACAATAAAAGCAGCCTTGGTGAAGAAAGAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACCCCACTAGCAAGTATTACCGTAATAAAAGAGCAGTCCAAGGGGGTCGCTTGTCAGCAATTACCATGGCACTT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CAGTATGGATCAGAGAGTGAAGAGGACGCTGCTTTAGCTGCTGCACGCTATGAAGAAGGGGAATCTGAAGCAGA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GAGCATCACTTCCTTCATGGACGTTTCCAACCCCTTTCATCAGCTTTACGACACAGTTAGGAGCTGTAGGAATC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ACCAAGGGCAGCTCATAGCTGAACCTTTCTTCCATTTGCCTTCAAAGAAAAAATACCCAGATTATTATCAGCAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ATTAAAATGCCCATATCACTTCAACAGATCAGAACAAAGCTAAAGAACCAAGAATATGAAACTTTAGATCATTT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GGAGTGTGATCTGAATTTAATGTTTGAAAATGCCAAACGTTATAACGTTCCCAATTCAGCCATCTATAAGCGAG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TTCTAAAACTGCAGCAAGTCATGCAGGCAAAGAAGAAGGAGCTTGCGAGGAGAGATGACATTGAGGACGGAGAC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AGCATGATCTCCTCAGCCACTTCTGACACTGGTAGTGCCAAAAGGAAAAGTAAAAAGAACATAAGAAAACAGCG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AATGAAAATTTTATTCAATGTTGTTCTTGAAGCTCGAGAGCCAGGTTCAGGCAGAAGACTTTGCGATCTATTTA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TGGTTAAGCCATCCAAGAAGGACTATCCTGATTATTATAAAATCATCTTAGAGCCAATGGACCTGAAAATAATT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GAGCATAACATCCGAAATGACAAATATGCAGGTGAAGAAGGAATGATGGAAGACATGAAACTCATGTTCCGCAA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TGCCAGGCACTACAATGAGGAGGGCTCCCAGGTATACAATGATGCCCATATCCTGGAGAAGTTACTCAAAGATA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AAAGGAAAGAGCTGGGCCCTCTGCCTGATGATGATGACATGGCTTCTCCCAAACTTAAATTGAGTAGGAAGAGT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GGTGTTTCTCCTAAGAAATCAAAGTACATGACTCCAATGCAGCAGAAACTGAATGAAGTGTATGAAGCTGTAAA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GAACTATACTGATAAGAGGGGTCGCCGCCTTAGTGCTATATTTCTAAGACTCCCCTCTAGATCAGAGCTGCCTG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 ACTACTACCTGACCATTAAAAAGCCCATGGACATGGAAAAAATTCGAAGTCACATGATGGCAAACAAGTACCAA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GACATAGATTCTATGGTAGAGGACTTTGTCATGATGTTTAATAATGCCTGTACCTACAATGAACCAGAGTCTTT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GATCTACAAAGATGCCCTTGTACTGCATAAAGTCCTCCTTGAGACTCGGAGAGACCTGGAGGGAGATGAGGATT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 CTCATGTCCCTAATGTGACGTTGCTGATTCAAGAGCTCATCCATAACCTTTTTGTGTCAGTCATGAGTCATCAG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GATGACGAAGGGAGGTGTTACAGCGACTCCTTAGCAGAAATTCCTGCTGTGGATCCCAACTCTCCCAATAAACC 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TCCCCTTACATTTGACATTATCAGGAAAAATGTTGAAAGTAATCGGTATCGGCGACTTGATTTATTTCAGGAGC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 ATATGTTTGAAGTATTGGAACGGGCAAGAAGGATGAACCGGACAGATTCCGAAATATATGAGGATGCTGTAGAA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 CTTCAGCAGTTTTTTATTAGAATTCGTGATGAACTCTGCAAAAATGGAGAGATCCTTCTTTCTCCAGCACTCAG 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 CTATACCACAAAACACTTGCATAACGATGTGGAAAAAGAAAAAAAGGAAAAATTGCCTAAAGAAATAGAGGAAG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 ATAAACTAAAACGCGAAGAAGAAAAAAGAGAAGCTGAAAAAAGTGAAGATTCCTCAGGTACTACAGGCCTCTCA 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GGCTTACATCGTACATACAGCCAGGACTGCAGCTTTAAGAACAGCATGTATCATGTCGGAGATTATGTCTATGT 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 TGAACCTGCGGAGGCCAATCTACAACCACATATAGTGTGTATTGAGAGACTGTGGGAGGATTCAGCTGGTGAAA 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 AATGGTTGTACGGCTGTTGGTTTTATCGGCCAAATGAAACATTCCATTTGGCTACACGAAAATTTCTAGAAAAA 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 GAAGTTTTTAAGAGTGACTACTACAATAAAGTACCTGTTAGTAAAATTCTAGGCAAATGTGTAGTCATGTTTGT 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 CAAGGAATACTTTAAATTATGTCCAGAAAACTTTCGCGATGAGGATGTTTTTGTCTGTGAATCGAGGTATTCTG 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 CCAAAACCAAATCTTTTAAGAAAATTAAACTGTGGACCATGCCCATCAGTTCAGTTAGATTTGTCCCTCGGGAT 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 GTGCCTTTGCCTGTGGTCCGAGTGGCCTCTGTGTTTGCAAATGCAGATAAAGGGGATGATGAGAAGAATACAGA 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 CAACTCAGATGACAATAGAGCTGAAGACAATTTTAACTTGGAAAAGGAAAAAGAAGATGTTCCTGTGGAGATGT 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 CCAATGGTGAGCCAGGTTGCCACTACTTTGAGCAGCTTCGGTACAATGACATGTGGCTGAAGGTTGGTGATTGT 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 GTCTTCATCAAATCCCACGGCTTGGTGCGCCCTCGTGTGGGCAGAATTGAGAAAGTATGGGTCCGAGATGGAGC 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 TGCATATTTTTATGGCCCTATCTTCATTCATCCAGAAGAAACAGAACATGAGCCCACAAAAATGTTCTACAAAA 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 AAGAAGTGTTTCTGAGTAATCTGGAAGAGACCTGCCCTATGAGTTGTATTCTGGGGAAATGTGCAGTGCTGTCA 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 TTCAAGGACTTCCTCTCCTGCAGGCCAACTGAAATACCAGAAAATGACATTCTGCTTTGTGAGAGCCGCTATAA 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 TGAGAGTGACAAGCAGATGAAGAAGTTCAAGGGTTTGAAGAGGTTTTCACTCTCTGCTAAAGTTGTAGATGATG 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 AAATCTACTACTTCAGAAAACCAATCATTCCTCAGAAGGAACCCTCACCTTTGTTAGAAAAGAAGATACAATTG 3996
Query 1 ---------------------------------------------------ATGGGAGAAGAAGATAGTGAGGT 23
|||||||||||.||||||||.||
Sbjct 3997 CTAGAAGCTAAATTTGCAGAGTTAGAAGGAGGAGATGATGATATTGAGGAGATGGGAGAAGAGGATAGTGAAGT 4070
Query 24 CATTGAACCTCCTTCTCTACCTCAGCTTCAGACCCCCCTGGCCAGTGAGCTGGACCTCATGCCCTACACACCCC 97
|||||||.||||.|||||||||||.||.|||||.||||||||||.||||.||||||||||||||||.|||||||
Sbjct 4071 CATTGAAGCTCCATCTCTACCTCAACTGCAGACACCCCTGGCCAATGAGTTGGACCTCATGCCCTATACACCCC 4144
Query 98 C---------------ACAGTCTACCCCAAAGTCTGCCAAAGGCAGTGCAAAGAAGGAAGGCTCCAAACGGAAA 156
| |||||||||||||||||||||||||||||||||||||||||||.|.||.|||||.|||
Sbjct 4145 CACAGCTTTCTGTCTTACAGTCTACCCCAAAGTCTGCCAAAGGCAGTGCAAAGAAGGAAAGTTCTAAACGAAAA 4218
Query 157 ATCAACATGAGTGGCTACATCCTGTTCAGCAGTGAGATGAGGGCTGTGATTAAGGCCCAACACCCAGACTACTC 230
||||||||||||||||||||..|||||||||||||.|||||.|||||||||||.|||||.||||||||||||||
Sbjct 4219 ATCAACATGAGTGGCTACATTTTGTTCAGCAGTGAAATGAGAGCTGTGATTAAAGCCCAGCACCCAGACTACTC 4292
Query 231 TTTCGGGGAGCTCAGCCGCCTGGTGGGGACAGAATGGAGAAATCTTGAGACAGCCAAGAAAGCAGAATATGA-- 302
|||.||||||||||||.|.|||||||||||||||||||||||.|||||.|||||||||||||||||||||||
Sbjct 4293 TTTTGGGGAGCTCAGCAGACTGGTGGGGACAGAATGGAGAAACCTTGAAACAGCCAAGAAAGCAGAATATGAAG 4366
Query 303 -------------------------------------------------------------------------- 302
Sbjct 4367 AGCGGGCAGCTAAAGTTGCTGAGCAGCAGGAGAGAGAGCGAGCAGCACAGCAACAGCAGCCGAGTGCTTCTCCC 4440
Query 303 -------------------------------------------------------------------------- 302
Sbjct 4441 CGAGCAGGCACCCCTGTGGGGGCTCTCATGGGGGTGGTGCCACCACCAACACCAATGGGGATGCTCAATCAGCA 4514
Query 303 ---------------AGGCATGATGGGTGGCTATCCGCCAGGCCTTCCACCTTTGCAGGGCCCAGTTGATGGCC 361
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4515 GTTGACACCTGTTGCAGGCATGATGGGTGGCTATCCGCCAGGCCTTCCACCTTTGCAGGGCCCAGTTGATGGCC 4588
Query 362 TTGTTAGCATGGGCAGCATGCAGCCACTTCACCCTGGGGGGCCTCCACCCCACCATCTTCCGCCAGGTGTGCCT 435
|||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||
Sbjct 4589 TTGTTAGCATGGGCAGCATGCAGCCACTTCACCCTGGGGGGCCTCCACCTCACCATCTTCCGCCAGGTGTGCCT 4662
Query 436 GGCCTCCCGGGCATCCCACCACCGGGTGTGATGAACCAAGGAGTGGCCCCTATGGTAGGGACTCCAGCACCAGG 509
||||||||.||||||||||||||||||||||||||.||||||||.|||||.|||||||||||||||||||||||
Sbjct 4663 GGCCTCCCAGGCATCCCACCACCGGGTGTGATGAATCAAGGAGTAGCCCCCATGGTAGGGACTCCAGCACCAGG 4736
Query 510 TGGAAGTCCATATGGACAACAGGTGGGAGTTTTGGGGCCTCCAGGGCAGCAGGCACCACCTCCATATCCCGGCC 583
|||||||||.||||||||||||||.|||||||||||.||||||||||||||||||||||||||||||||.||.|
Sbjct 4737 TGGAAGTCCGTATGGACAACAGGTAGGAGTTTTGGGACCTCCAGGGCAGCAGGCACCACCTCCATATCCTGGTC 4810
Query 584 CACATCCAGCTGGACCCCCTGTCATACAGCAGCCAACAACACCCATGTTTGTAGCTCCCCCACCAAAGACCCAG 657
|.|||||||||||.||||||||||||||||||||||||||.|||||||||||.||||||||||||||||||||.
Sbjct 4811 CTCATCCAGCTGGCCCCCCTGTCATACAGCAGCCAACAACGCCCATGTTTGTGGCTCCCCCACCAAAGACCCAA 4884
Query 658 CGGCTTCTTCACTCAGAGGCCTACCTGAAATACATTGAAGGACTCAGTGCGGAGTCCAACAGCATTAGCAAGTG 731
.|||||||.|||||||||||||||||||||||||||||||||||||||||.||.||||||||||||||||||||
Sbjct 4885 AGGCTTCTCCACTCAGAGGCCTACCTGAAATACATTGAAGGACTCAGTGCTGAATCCAACAGCATTAGCAAGTG 4958
Query 732 GGATCAGACACTGGCAGCTCGAAGACGCGACGTCCATTTGTCGAAAGAACAGGAGAGCCGCCTACCCTCTCACT 805
|||.||.||..||||||||||||||||.||.|||||||||||.|||||||||||||||||||||||.|||||||
Sbjct 4959 GGACCAAACTTTGGCAGCTCGAAGACGGGATGTCCATTTGTCCAAAGAACAGGAGAGCCGCCTACCTTCTCACT 5032
Query 806 GGCTGAAAAGCAAAGGGGCCCACACCACCATGGCAGATGCCCTCTGGCGCCTTCGAGATTTGATGCTCCGGGAC 879
||||.|||||.||||||||.||||||||||||||||||||||||||||||||.||.|||||.|||||.||.|||
Sbjct 5033 GGCTCAAAAGTAAAGGGGCACACACCACCATGGCAGATGCCCTCTGGCGCCTACGGGATTTAATGCTTCGAGAC 5106
Query 880 ACCCTCAACATTCGCCAAGCATACAACCTAGAAAATGTT 918
||.||||||||.||.||.|||||||||||||||||||||
Sbjct 5107 ACTCTCAACATCCGACAGGCATACAACCTAGAAAATGTT 5145
