Nucleotide Global Alignment

Description

Query:
TRCN0000475263
Subject:
XM_017316152.1
Aligned Length:
5082
Identities:
854
Gaps:
4164

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGAGGAGATTGGCTTTTCGAGGCGCTGGTTGTGCTCTGAAGTTGGATTCCATGGGTTCCAAGAGAAGAAGAGC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CACCTCTCCTTCCAGCAGTGTCAGTGGAGACTTTGATGACGGGCACCATTCTGTGCCTACACCAGGCCCAAGCA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GGAAAAGGAGAAGACTGTCCAATCTTCCAACTGTAGATCCTATTGCTGTGTGCCATGAACTCTATAACACCATC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CGAGACTATAAGGATGAACAGGGCAGACTCCTCTGTGAGCTGTTCATTAGGGCTCCAAAGCGGAGAAATCAACC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AGACTATTATGAAGTGGTTTCTCAGCCCATTGACTTGATGAAAATCCAACAGAAACTTAAAATGGAAGAGTATG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  ATGATGTTAATCTACTGACTGCTGACTTCCAGCTGCTTTTTAACAATGCAAAGGCCTACTATAAGCCAGATTCC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CCTGAGTATAAAGCTGCTTGTAAACTCTGGGATTTGTACCTTCGAACAAGAAATGAGTTTGTTCAGAAAGGAGA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  AGCAGACGATGAAGATGATGACGAAGATGGGCAAGACAATCAAGGCACACTGGCTGACGGCTCTTCTCCAGGTT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  ATCTGAAGGAGATCCTGGAGCAGCTTCTTGAAGCCATAGTTGTAGCCACAAATCCATCAGGACGGCTCATCAGT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GAACTTTTTCAGAAACTGCCTTCCAAAGTGCAATATCCAGACTATTATGCAATAATTAAGGAACCTATAGATCT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CAAGACCATTGCTCAGAGGATACAGAATGGAAGCTACAAAAGTATACACGCAATGGCCAAAGATATAGATCTTC  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TAGCAAAAAATGCCAAAACATACAATGAGCCTGGGTCTCAAGTATTCAAGGATGCCAATTCGATTAAAAAAATA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TTTTATATGAAAAAGGCAGAAATTGAACATCATGAAATGACTAAATCAAGTCTTCGAATAAGTAATAAAAGAGC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AGTCCAAGGGGGTCGCTTGTCAGCAATTACCATGGCACTTCAGTATGGATCAGAGAGTGAAGAGGACGCTGCTT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  TAGCTGCTGCACGCTATGAAGAAGGGGAATCTGAAGCAGAGAGCATCACTTCCTTCATGGACGTTTCCAACCCC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TTTCATCAGCTTTACGACACAGTTAGGAGCTGTAGGAATCACCAAGGGCAGCTCATAGCTGAACCTTTCTTCCA  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TTTGCCTTCAAAGAAAAAATACCCAGATTATTATCAGCAAATTAAAATGCCCATATCACTTCAACAGATCAGAA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  CAAAGCTAAAGAACCAAGAATATGAAACTTTAGATCATTTGGAGTGTGATCTGAATTTAATGTTTGAAAATGCC  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  AAACGTTATAACGTTCCCAATTCAGCCATCTATAAGCGAGTTCTAAAACTGCAGCAAGTCATGCAGGCAAAGAA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GAAGGAGCTTGCGAGGAGAGATGACATTGAGGACGGAGACAGCATGATCTCCTCAGCCACTTCTGACACTGGTA  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GTGCCAAAAGGAAAAGGAATACTCATGACAGTGAGATGTTGGGTCTCAGGAGGCTATCCAGTAAAAAGAACATA  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  AGAAAACAGCGAATGAAAATTTTATTCAATGTTGTTCTTGAAGCTCGAGAGCCAGGTTCAGGCAGAAGACTTTG  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  CGATCTATTTATGGTTAAGCCATCCAAGAAGGACTATCCTGATTATTATAAAATCATCTTAGAGCCAATGGACC  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  TGAAAATAATTGAGCATAACATCCGAAATGACAAATATGCAGGTGAAGAAGGAATGATGGAAGACATGAAACTC  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  ATGTTCCGCAATGCCAGGCACTACAATGAGGAGGGCTCCCAGGTATACAATGATGCCCATATCCTGGAGAAGTT  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  ACTCAAAGATAAAAGGAAAGAGCTGGGCCCTCTGCCTGATGATGATGACATGGCTTCTCCCAAACTTAAATTGA  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  GTAGGAAGAGTGGTGTTTCTCCTAAGAAATCAAAGTACATGACTCCAATGCAGCAGAAACTGAATGAAGTGTAT  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  GAAGCTGTAAAGAACTATACTGATAAGAGGGGTCGCCGCCTTAGTGCTATATTTCTAAGACTCCCCTCTAGATC  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  AGAGCTGCCTGACTACTACCTGACCATTAAAAAGCCCATGGACATGGAAAAAATTCGAAGTCACATGATGGCAA  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  ACAAGTACCAAGACATAGATTCTATGGTAGAGGACTTTGTCATGATGTTTAATAATGCCTGTACCTACAATGAA  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  CCAGAGTCTTTGATCTACAAAGATGCCCTTGTACTGCATAAAGTCCTCCTTGAGACTCGGAGAGACCTGGAGGG  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  AGATGAGGATTCTCATGTCCCTAATGTGACGTTGCTGATTCAAGAGCTCATCCATAACCTTTTTGTGTCAGTCA  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  TGAGTCATCAGGATGACGAAGGGAGGTGTTACAGCGACTCCTTAGCAGAAATTCCTGCTGTGGATCCCAACTCT  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  CCCAATAAACCTCCCCTTACATTTGACATTATCAGGAAAAATGTTGAAAGTAATCGGTATCGGCGACTTGATTT  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  ATTTCAGGAGCATATGTTTGAAGTATTGGAACGGGCAAGAAGGATGAACCGGACAGATTCCGAAATATATGAGG  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  ATGCTGTAGAACTTCAGCAGTTTTTTATTAGAATTCGTGATGAACTCTGCAAAAATGGAGAGATCCTTCTTTCT  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  CCAGCACTCAGCTATACCACAAAACACTTGCATAACGATGTGGAAAAAGAAAAAAAGGAAAAATTGCCTAAAGA  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  AATAGAGGAAGATAAACTAAAACGCGAAGAAGAAAAAAGAGAAGCTGAAAAAAGTGAAGATTCCTCAGGTACTA  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  CAGGCCTCTCAGGCTTACATCGTACATACAGCCAGGACTGCAGCTTTAAGAACAGCATGTATCATGTCGGAGAT  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  TATGTCTATGTTGAACCTGCGGAGGCCAATCTACAACCACATATAGTGTGTATTGAGAGACTGTGGGAGGATTC  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  AGCTGGTGAAAAATGGTTGTACGGCTGTTGGTTTTATCGGCCAAATGAAACATTCCATTTGGCTACACGAAAAT  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  TTCTAGAAAAAGAAGTTTTTAAGAGTGACTACTACAATAAAGTACCTGTTAGTAAAATTCTAGGCAAATGTGTA  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  GTCATGTTTGTCAAGGAATACTTTAAATTATGTCCAGAAAACTTTCGCGATGAGGATGTTTTTGTCTGTGAATC  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  GAGGTATTCTGCCAAAACCAAATCTTTTAAGAAAATTAAACTGTGGACCATGCCCATCAGTTCAGTTAGATTTG  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  TCCCTCGGGATGTGCCTTTGCCTGTGGTCCGAGTGGCCTCTGTGTTTGCAAATGCAGATAAAGGGGATGATGAG  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  AAGAATACAGACAACTCAGATGACAATAGAGCTGAAGACAATTTTAACTTGGAAAAGGAAAAAGAAGATGTTCC  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  TGTGGAGATGTCCAATGGTGAGCCAGGTTGCCACTACTTTGAGCAGCTTCGGTACAATGACATGTGGCTGAAGG  3478

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3479  TTGGTGATTGTGTCTTCATCAAATCCCACGGCTTGGTGCGCCCTCGTGTGGGCAGAATTGAGAAAGTATGGGTC  3552

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3553  CGAGATGGAGCTGCATATTTTTATGGCCCTATCTTCATTCATCCAGAAGAAACAGAACATGAGCCCACAAAAAT  3626

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3627  GTTCTACAAAAAAGAAGTGTTTCTGAGTAATCTGGAAGAGACCTGCCCTATGAGTTGTATTCTGGGGAAATGTG  3700

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3701  CAGTGCTGTCATTCAAGGACTTCCTCTCCTGCAGGCCAACTGAAATACCAGAAAATGACATTCTGCTTTGTGAG  3774

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3775  AGCCGCTATAATGAGAGTGACAAGCAGATGAAGAAGTTCAAGGGTTTGAAGAGGTTTTCACTCTCTGCTAAAGT  3848

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3849  TGTAGATGATGAAATCTACTACTTCAGAAAACCAATCATTCCTCAGAAGGAACCCTCACCTTTGTTAGAAAAGA  3922

Query    1  --------------------------------------------------------------ATGGGAGAAGAA  12
                                                                          |||||||||||.
Sbjct 3923  AGATACAATTGCTAGAAGCTAAATTTGCAGAGTTAGAAGGAGGAGATGATGATATTGAGGAGATGGGAGAAGAG  3996

Query   13  GATAGTGAGGTCATTGAACCTCCTTCTCTACCTCAGCTTCAGACCCCCCTGGCCAGTGAGCTGGACCTCATGCC  86
            ||||||||.|||||||||.||||.|||||||||||.||.|||||.||||||||||.||||.|||||||||||||
Sbjct 3997  GATAGTGAAGTCATTGAAGCTCCATCTCTACCTCAACTGCAGACACCCCTGGCCAATGAGTTGGACCTCATGCC  4070

Query   87  CTACACACCCCC---------------ACAGTCTACCCCAAAGTCTGCCAAAGGCAGTGCAAAGAAGGAAGGCT  145
            |||.||||||||               |||||||||||||||||||||||||||||||||||||||||||.|.|
Sbjct 4071  CTATACACCCCCACAGCTTTCTGTCTTACAGTCTACCCCAAAGTCTGCCAAAGGCAGTGCAAAGAAGGAAAGTT  4144

Query  146  CCAAACGGAAAATCAACATGAGTGGCTACATCCTGTTCAGCAGTGAGATGAGGGCTGTGATTAAGGCCCAACAC  219
            |.|||||.|||||||||||||||||||||||..|||||||||||||.|||||.|||||||||||.|||||.|||
Sbjct 4145  CTAAACGAAAAATCAACATGAGTGGCTACATTTTGTTCAGCAGTGAAATGAGAGCTGTGATTAAAGCCCAGCAC  4218

Query  220  CCAGACTACTCTTTCGGGGAGCTCAGCCGCCTGGTGGGGACAGAATGGAGAAATCTTGAGACAGCCAAGAAAGC  293
            ||||||||||||||.||||||||||||.|.|||||||||||||||||||||||.|||||.||||||||||||||
Sbjct 4219  CCAGACTACTCTTTTGGGGAGCTCAGCAGACTGGTGGGGACAGAATGGAGAAACCTTGAAACAGCCAAGAAAGC  4292

Query  294  AGAATATGA-----------------------------------------------------------------  302
            |||||||||                                                                 
Sbjct 4293  AGAATATGAAGAGCGGGCAGCTAAAGTTGCTGAGCAGCAGGAGAGAGAGCGAGCAGCACAGCAACAGCAGCCGA  4366

Query  303  --------------------------------------------------------------------------  302
                                                                                      
Sbjct 4367  GTGCTTCTCCCCGAGCAGGCACCCCTGTGGGGGCTCTCATGGGGGTGGTGCCACCACCAACACCAATGGGGATG  4440

Query  303  --------------------------AGGCATGATGGGTGGCTATCCGCCAGGCCTTCCACCTTTGCAGGGCCC  350
                                      ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4441  CTCAATCAGCAGTTGACACCTGTTGCAGGCATGATGGGTGGCTATCCGCCAGGCCTTCCACCTTTGCAGGGCCC  4514

Query  351  AGTTGATGGCCTTGTTAGCATGGGCAGCATGCAGCCACTTCACCCTGGGGGGCCTCCACCCCACCATCTTCCGC  424
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||
Sbjct 4515  AGTTGATGGCCTTGTTAGCATGGGCAGCATGCAGCCACTTCACCCTGGGGGGCCTCCACCTCACCATCTTCCGC  4588

Query  425  CAGGTGTGCCTGGCCTCCCGGGCATCCCACCACCGGGTGTGATGAACCAAGGAGTGGCCCCTATGGTAGGGACT  498
            |||||||||||||||||||.||||||||||||||||||||||||||.||||||||.|||||.||||||||||||
Sbjct 4589  CAGGTGTGCCTGGCCTCCCAGGCATCCCACCACCGGGTGTGATGAATCAAGGAGTAGCCCCCATGGTAGGGACT  4662

Query  499  CCAGCACCAGGTGGAAGTCCATATGGACAACAGGTGGGAGTTTTGGGGCCTCCAGGGCAGCAGGCACCACCTCC  572
            ||||||||||||||||||||.||||||||||||||.|||||||||||.||||||||||||||||||||||||||
Sbjct 4663  CCAGCACCAGGTGGAAGTCCGTATGGACAACAGGTAGGAGTTTTGGGACCTCCAGGGCAGCAGGCACCACCTCC  4736

Query  573  ATATCCCGGCCCACATCCAGCTGGACCCCCTGTCATACAGCAGCCAACAACACCCATGTTTGTAGCTCCCCCAC  646
            ||||||.||.||.|||||||||||.||||||||||||||||||||||||||.|||||||||||.||||||||||
Sbjct 4737  ATATCCTGGTCCTCATCCAGCTGGCCCCCCTGTCATACAGCAGCCAACAACGCCCATGTTTGTGGCTCCCCCAC  4810

Query  647  CAAAGACCCAGCGGCTTCTTCACTCAGAGGCCTACCTGAAATACATTGAAGGACTCAGTGCGGAGTCCAACAGC  720
            ||||||||||..|||||||.|||||||||||||||||||||||||||||||||||||||||.||.|||||||||
Sbjct 4811  CAAAGACCCAAAGGCTTCTCCACTCAGAGGCCTACCTGAAATACATTGAAGGACTCAGTGCTGAATCCAACAGC  4884

Query  721  ATTAGCAAGTGGGATCAGACACTGGCAGCTCGAAGACGCGACGTCCATTTGTCGAAAGAACAGGAGAGCCGCCT  794
            ||||||||||||||.||.||..||||||||||||||||.||.|||||||||||.||||||||||||||||||||
Sbjct 4885  ATTAGCAAGTGGGACCAAACTTTGGCAGCTCGAAGACGGGATGTCCATTTGTCCAAAGAACAGGAGAGCCGCCT  4958

Query  795  ACCCTCTCACTGGCTGAAAAGCAAAGGGGCCCACACCACCATGGCAGATGCCCTCTGGCGCCTTCGAGATTTGA  868
            |||.|||||||||||.|||||.||||||||.||||||||||||||||||||||||||||||||.||.|||||.|
Sbjct 4959  ACCTTCTCACTGGCTCAAAAGTAAAGGGGCACACACCACCATGGCAGATGCCCTCTGGCGCCTACGGGATTTAA  5032

Query  869  TGCTCCGGGACACCCTCAACATTCGCCAAGCATACAACCTAGAAAATGTT  918
            ||||.||.|||||.||||||||.||.||.|||||||||||||||||||||
Sbjct 5033  TGCTTCGAGACACTCTCAACATCCGACAGGCATACAACCTAGAAAATGTT  5082

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