Nucleotide Global Alignment
Description
- Query:
- TRCN0000475616
- Subject:
- XM_006535631.2
- Aligned Length:
- 1148
- Identities:
- 898
- Gaps:
- 85
Alignment
Query 1 ATGGAT---TTAC-CAGT----GAACCTAACCTCCTT-------------------------------TTCCCT 35
|| |||| .||| ||.|| ||.|.|| |.||||
Sbjct 1 ----ATGCCTTACGTAGTGCGGGAGCC---CCACTTTGCTAAAGCAGGTCTGGGTGGGCGCGCCAGCGTGCCCT 67
Query 36 CTC----CA----CCTCCTCCCCTTTGGAGA----------------------CCA--ACCA-----CAGCCTC 72
||| || ||||...|.|..|||||| ||| .||| ||||.|.
Sbjct 68 CTCGGAGCAGCAGCCTCAGGCACGGTGGAGAGAGATCAGGACAGGGCAGAAGGCCATCTCCAGAAAGCAGCTTG 141
Query 73 GGCAAAGACGACCTGCGCCCCAGCTC-GCCCCTGCTCTCGGTCTTCGGAGTGCTTATTCTCACCTTGCTGGGCT 145
|.||..||.|.|||||||||.|| || |||..|.|||||.|..|||.|||||||..|.||.||.|||.||||||
Sbjct 142 GACACGGAAGTCCTGCGCCCTAG-TCGGCCTTTTCTCTCAGCTTTCCGAGTGCTAGTCCTGACTTTGTTGGGCT 214
Query 146 TTCTGGTGGCGGCGACGTTCGCCTGGAACCTGCTGGTGCTGGCGACCATCCTCCGTGTACGCACCTTCCACCGC 219
||||.|..|||||.||.|||.|.||||||||||||||||||||.|||||||||...|||||||||||||||||.
Sbjct 215 TTCTAGCTGCGGCCACATTCACTTGGAACCTGCTGGTGCTGGCTACCATCCTCAAGGTACGCACCTTCCACCGA 288
Query 220 GTGCCCCACAACCTGGTGGCATCCATGGCCGTCTCGGATGTCCTGGTGGCCGCGCTGGTCATGCCGCTGAGCCT 293
||.||.|||||||||||.||.|||||||||.||||||||||.||.|||||.|.||||||.|||||.||||||||
Sbjct 289 GTACCACACAACCTGGTAGCTTCCATGGCCATCTCGGATGTGCTAGTGGCTGTGCTGGTTATGCCACTGAGCCT 362
Query 294 GGTGCACGAGCTGTCCGGGCGCCGCTGGCAGCTAGGTCGGAGGCTGTGCCAGCTTTGGATCGCGTGCGACGTGC 367
|||.||.||||||||.|||||||||||||||||.||.|||.|.||.||||||||.||||||||.||.|||||||
Sbjct 363 GGTACATGAGCTGTCTGGGCGCCGCTGGCAGCTGGGCCGGCGTCTATGCCAGCTGTGGATCGCATGTGACGTGC 436
Query 368 TTTGCTGCACGGCCAGCATCTGGAACGTGACGGCCATAGCCCTGGACCGCTACTGGTCCATCACGCGCCACATG 441
|.|||||.||.||||||||||||||.|||||.||.|||||.|||||||||||||||||.||||||||||||.||
Sbjct 437 TCTGCTGTACTGCCAGCATCTGGAATGTGACAGCAATAGCTCTGGACCGCTACTGGTCAATCACGCGCCACCTG 510
Query 442 GAATACACGCTCCGCACCCGCAAGTGCGTCTCCAACGTCATGATCGCGCTCACCTGGGCACTCTCCGCTGTCAT 515
||.|||||.|||||.|||||||||.|.||||||||.||.||||||..|||||||||||||||||||.|||||||
Sbjct 511 GAGTACACACTCCGTACCCGCAAGCGTGTCTCCAATGTGATGATCCTGCTCACCTGGGCACTCTCCACTGTCAT 584
Query 516 CTCTCTGGCCCCGCTGCTTTTTGGCTGGGGAGAGACGTACTCTGAGGGCAGCGAGGAGTGCCAGGTAAGCCGCG 589
|||||||||.||.|||||.|||||||||||||||||.||.||||||..|||.|||||.|||||.||.||.||||
Sbjct 585 CTCTCTGGCTCCACTGCTATTTGGCTGGGGAGAGACTTATTCTGAGCCCAGTGAGGAATGCCAAGTCAGTCGCG 658
Query 590 AGCCTTCCTACGCCGTGTTCTCCACCGTAGGCGCCTTCTACCTGCCGCTCTGTGTGGTGCTCTTCGTGTACTGG 663
|||||||||||.||||||||||||||||.||.|||||||||||||||||.||.|||||||||||.|||||||||
Sbjct 659 AGCCTTCCTACACCGTGTTCTCCACCGTGGGTGCCTTCTACCTGCCGCTGTGCGTGGTGCTCTTTGTGTACTGG 732
Query 664 AAGATCTACAAGGCTGCCAAGTTCCGCGTGGGCTCCAGGAAGACCAATAGCGTCTCACCCATATCCGAAGCTGT 737
||.||.||||.|||.||.||.||||||.|||||||||||||||||||.||||||||.|||.||.||||||||||
Sbjct 733 AAAATTTACAGGGCGGCGAAATTCCGCATGGGCTCCAGGAAGACCAACAGCGTCTCCCCCGTACCCGAAGCTGT 806
Query 738 GGAGGTGAAGGACTCTGCCAAACAGCCCCAGATGGTGTTCACGGTCCGCCACGCCACCGTCACCTTCCAGCCAG 811
||||||||||.|..||.|..||||.||||||||||||||||||||||||||.||||||||||||||||||.|||
Sbjct 807 GGAGGTGAAGAATGCTACACAACATCCCCAGATGGTGTTCACGGTCCGCCATGCCACCGTCACCTTCCAGACAG 880
Query 812 AAGGGGACACGTGGCGGGAGCAGAAGGAGCAGCGGGCCGCCCTCATGGTGGGCATCCTCATTGGCGTGTTCGTG 885
|||||||.||||||.||||||||||||||||..||||.|||||||||||||||||||||||.||.|||||.|||
Sbjct 881 AAGGGGATACGTGGAGGGAGCAGAAGGAGCAAAGGGCAGCCCTCATGGTGGGCATCCTCATCGGAGTGTTTGTG 954
Query 886 CTCTGCTGGATCCCCTTCTTTCTCACCGAGCTCATCAGTCCCCTCTGCTCCTGTGACATCCCCGCCATCTGGAA 959
|||||||||.||||.|||||..||||.|||||||||||||||||.||.|||||.|||.||||.|||||||||||
Sbjct 955 CTCTGCTGGTTCCCTTTCTTCGTCACAGAGCTCATCAGTCCCCTGTGTTCCTGGGACGTCCCTGCCATCTGGAA 1028
Query 960 AAGCATCTTCCTGTGGCTTGGCTACTCCAACTCCTTCTTTAACCCCCTGATCTATACGGCTTTCAACAAGAACT 1033
.|||||||||||||||.|.|||||.||.||.||||||||.|||||.||.|||||.||.||.|||||||.||.||
Sbjct 1029 GAGCATCTTCCTGTGGTTGGGCTATTCTAATTCCTTCTTCAACCCACTCATCTACACAGCATTCAACAGGAGCT 1102
Query 1034 ACAACAGCGCCTTCAAGAACTTCTTTTCTAGGCAACAC 1071
|||.|||.||.||||||..||||||.||.|.||||||.
Sbjct 1103 ACAGCAGTGCTTTCAAGGTCTTCTTCTCCAAGCAACAA 1140