Nucleotide Global Alignment
Description
- Query:
- TRCN0000475751
- Subject:
- NR_148519.2
- Aligned Length:
- 3902
- Identities:
- 1334
- Gaps:
- 2567
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GAGAGAGCAGAGAGCGAGCGGAGAGCGAGGTGTAGAGAAACCGAGGGGGAGAGAACCCGAGTGTGTGTATGCGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTGCGTGTGTGAGCGCGAGCGAGCGAGAGAGAGGAGCGAGAGAGTGTGAGCGAGAAAGAATAAAAGGAAAGAAG 148
Query 1 ---------ATGTATATAAAGATGGCCACGTTAGCAAACGGACAGGCTGACAACGCAAGCCTCAGTACCAACGG 65
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 ATTTTCTCTATGTATATAAAGATGGCCACGTTAGCAAACGGACAGGCTGACAACGCAAGCCTCAGTACCAACGG 222
Query 66 GCTCGGCAGCAGCCCGGGCAGTGCCGGGCACATGAACGGATTAAGCCACAGCCCGGGGAACCCGTCGACCATTC 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GCTCGGCAGCAGCCCGGGCAGTGCCGGGCACATGAACGGATTAAGCCACAGCCCGGGGAACCCGTCGACCATTC 296
Query 140 CCATGAAGGACCATGATGCCATCAAGCTGTTCATTGGGCAGATCCCCCGCAACCTGGATGAGAAGGACCTCAAG 213
|||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CCATGAAGGACCACGATGCCATCAAGCTGTTCATTGGGCAGATCCCCCGCAACCTGGATGAGAAGGACCTCAAG 370
Query 214 CCCCTCTTCGAGGAGTTTGGCAAAATCTACGAGCTTACGGTTCTGAAGGACAGGTTCACAGGCATGCACAAAGG 287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CCCCTCTTCGAGGAGTTTGGCAAAATCTACGAGCTTACGGTTCTGAAGGACAGGTTCACAGGCATGCACAAAGG 444
Query 288 CTGCGCCTTCCTCACCTACTGCGAGCGTGAGTCAGCGCTGAAGGCCCAGAGCGCGCTGCACGAGCAGAAGACTC 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CTGCGCCTTCCTCACCTACTGCGAGCGTGAGTCAGCGCTGAAGGCCCAGAGCGCGCTGCACGAGCAGAAGACTC 518
Query 362 TGCCCGGGATGAACCGGCCGATCCAGGTGAAGCCTGCGGACAGCGAGAGCCGAGGAGGTAGTAGCTGCCTGCGC 435
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TGCCCGGGATGAACCGGCCGATCCAGGTGAAGCCTGCGGACAGCGAGAGCCGAGGAG----------------- 575
Query 436 CAGCCCCCTTCACATAGAAAACTCTTCGTGGGCATGCTCAACAAGCAACAGTCCGAGGACGACGTGCGCCGCCT 509
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 576 -------------ATAGAAAACTCTTCGTGGGCATGCTCAACAAGCAACAGTCCGAGGACGACGTGCGCCGCCT 636
Query 510 TTTCGAGGCCTTTGGGAACATCGAGGAGTGCACCATCCTGCGCGGGCCCGACGGCAACAGCAAGGGGTGCGCCT 583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 637 TTTCGAGGCCTTTGGGAACATCGAGGAGTGCACCATCCTGCGCGGGCCCGACGGCAACAGCAAGGGGTGCGCCT 710
Query 584 TTGTGAAGTACTCCTCCCACGCCGAGGCGCAGGCCGCCATCAACGCGCTACACGGCAGCCAGACCATGCCGGGA 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 711 TTGTGAAGTACTCCTCCCACGCCGAGGCGCAGGCCGCCATCAACGCGCTACACGGCAGCCAGACCATGCCGGGA 784
Query 658 GCCTCGTCCAGTCTGGTGGTCAAGTTCGCCGACACCGACAAGGAGCGCACGATGCGGCGAATGCAGCAGATGGC 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 785 GCCTCGTCCAGTCTGGTGGTCAAGTTCGCCGACACCGACAAGGAGCGCACGATGCGGCGAATGCAGCAGATGGC 858
Query 732 TGGCCAGATGGGCATGTTCAACCCCATGGCCATCCCTTTCGGGGCCTACGGCGCCTACGCTCAGGCACTGATGC 805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 859 TGGCCAGATGGGCATGTTCAACCCCATGGCCATCCCTTTCGGGGCCTACGGCGCCTACGCTCAGGCA---ATGC 929
Query 806 AGCAGCAAGCGGCCCTGATGGCATCAGTCGCGCAGGGCGGCTACCTGAACCCCATGGCTGCCTTCGCTGCCGCC 879
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 930 AGCAGCAAGCGGCCCTGATGGCATCAGTCGCGCAGGGCGGCTACCTGAACCCCATGGCTGCCTTCGCTGCCGCC 1003
Query 880 CAGATGCAGCAGATGGCGGCCCTCAACATGAATGGCCTGGCGGCCGCACCTATGACCCCAACCTCAGGTGGCAG 953
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1004 CAGATGCAGCAGATGGCGGCCCTCAACATGAATGGCCTGGCGGCCGCACCTATGACCCCAACCTCAGGTGGCAG 1077
Query 954 CACCCCTCCGGGCATCACTGCACCAGCCGTGCCTAGCATCCCATCCCCCATTGGGGTGAATGGCTTCACCGGCC 1027
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1078 CACCCCTCCGGGCATCACTGCACCAGCCGTGCCTAGCATCCCATCCCCCATTGGGGTGAATGGCTTCACCGGCC 1151
Query 1028 TCCCCCCACAGGCCAATGGGCAACCTGCTGCGGAAGCTGTGTTCGCCAATGGCATCCACCCCTACCCAGCACAG 1101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1152 TCCCCCCACAGGCCAATGGGCAACCTGCTGCGGAAGCTGTGTTCGCCAATGGCATCCACCCCTACCCAGCACAG 1225
Query 1102 AGCCCCACCGCCGCGGACCCCCTGCAGCAGGCCTACGCCGGAGTGCAGCAGTATGCAG---CAGCTGCCTACCC 1172
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1226 AGCCCCACCGCCGCGGACCCCCTGCAGCAGGCCTACGCCGGAGTGCAGCAGTATGCAGGTCCAGCTGCCTACCC 1299
Query 1173 TGCTGCCTATGGTCAGATAAGCCAGGCCTTTCCTCAGCCGCCTCCAATGATCCCCCAGCAGCAGAGAGAAGGGC 1246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1300 TGCTGCCTATGGTCAGATAAGCCAGGCCTTTCCTCAGCCGCCTCCAATGATCCCCCAGCAGCAGAGAGAA---- 1369
Query 1247 CCGAGGGCTGTAACCTGTTCATCTACCATCTGCCCCAGGAGTTTGGGGACGCTGAGCTGATGCAGATGTTCCTC 1320
Sbjct 1370 -------------------------------------------------------------------------- 1369
Query 1321 CCTTTCGGCTTCGTGAGCTTCGACAACCCGGCCAGCGCGCAGACCGCCATCCAGGCCATGAACGGCTTCCAGAT 1394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1370 ------GGCTTCGTGAGCTTCGACAACCCGGCCAGCGCGCAGACCGCCATCCAGGCCATGAACGGCTTCCAGAT 1437
Query 1395 CGGCATGAAGAGGCTCAAGGTGCAGCTGAAGCGGCCCAAAGACGCCAATCGCCCGTAC---------------- 1452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1438 CGGCATGAAGAGGCTCAAGGTGCAGCTGAAGCGGCCCAAAGACGCCAATCGCCCGTACTGAGCGCCGGCGGGAG 1511
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 1512 CGTCCCCCGGGGGAGACCAGGACTCGCACAGGGCCAGTCAAATCCACCACAGTCTCGCGCTGAGCTAGGAATAA 1585
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 1586 AGTTCACGTAATCACATGAGAGTGGAGAAAAGTCCCCCATCCGGCAGGATGCTGAACGGGCTACATTAAAAAAC 1659
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 1660 AAACCTCTCTCTATATATATTTATAAATGAGAACTGTTGGATGACACCTTTGACATATCAGCCAATATCAATCA 1733
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 1734 AGCTGAAGACTCCAGACACTGTCTGTGTGACTGTAACATTTCTTCAAGGAAAGTATAGCGTCTATGGAGTTCAG 1807
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 1808 AGGGCACGTGTTTGGGGGAAAATATATATGACATGAAGAAGAAGATGAAGAAAAATGAGAAAAAAACACACAAA 1881
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 1882 AGGCAACTTTAAAACAAAATATCACGAGCAGACGGGGAGGCTGAAGGGCTGGGAGCTGGGAGGAGACGCTGCTT 1955
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 1956 ACCGATCCCGGGGCTTTTCCAGCCCACGGGCGCCTGACGCAGGCTGGGGCAAGTGGTGCGTGGGGCCTGGTCCC 2029
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 2030 CAAGGGGCGGCTGAGAGGCCGCCACTGAGCATCTCTATCTGTCATTCCTTTAGCTATTTAGGGACCAAAGGACC 2103
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 2104 AAACTTTTTATTGCAGATGTGTAGCTCTATGTCAAATAGAGGGGGAATGGAGGACCCCCTCCTTCCTGCCTCAT 2177
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 2178 GGCTGTTCTTGAAACAGCTTAGAGCGATTCTATGAAAAAATGTAATAAAAAATTAAAAAAAAAACAAAAAACAA 2251
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 2252 AAAAAACAACAAAAAAAGGAAAAATAACGCTTCAATGCTTTTAAAACAGCAAGATAATAGTTCTTTGATACTTT 2325
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 2326 GAGAGGCGCTTTGATGACCCTCATCCAAGTCTATGACACTTTCCTATGGTTTTCTGTATTCTATGTCTGGATGG 2399
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 2400 AGCTGTTAAAAGATGAACAAATTGGTGGATATTTGGGGAAAGCAACACAAATCTTAAAACTCACCCGTGAAGTG 2473
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 2474 TGAGAAAACAAGGAGGGGAACAAATGGGACTTACCAAGCAAGGTCATTGTTGTGAAAAGTCTGTAAATGCTTCT 2547
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 2548 AACTCTTCCCCCTCTTAAAATCATAATAGTTGTACAGAATTTTAAAAAGGAAAAGTTTAAAATACCTATATAAT 2621
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 2622 AGAAGAAAAATTAGAGGAAAGCAAAAAATAAAAAAAAAAAATAAAAAAGGAAAAAAAAAACCTATAGAAGTTAG 2695
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 2696 CATTACTGCTAAAATCCCAGATGTTGTAGGACTGTACTTTTGTAGAGTTTAGACAGAGCATCAATCCCTTCTCC 2769
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 2770 CCGCGAGTGCAGTCGGATGCCGTTGTCCCCAAGGGCCAGGCCGAACTCGCCCCACACCTGCGGGCGCCTGGCTG 2843
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 2844 CCGACGCCGGTGGAGGCCACGCCGTCGGTCGGGAACGGTCGCGTCGCCCGGGTCGCCGCCGCCGCCGCCGCCGT 2917
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 2918 CATCCTCGCCTCTCGCTTCCCTCTGGGAGCTGCGCGCGCTTCACTCACCTTCCGCTTCACTCGCCTTCCACGCT 2991
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 2992 TGCTCCAGAGACTTTCCGGGCAAGGGAGAACTGGGAACTTTCATCTTAAAACAACTAGACAACACACACACACA 3065
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 3066 CAAAACCTTAAAAAAGAGAGAGAAAAATAAACAATCTTTGAAGAATTTCTGAAACTGTTTACAAGGAATTTTGA 3139
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 3140 AAAACAGGGATGTTTAAATGATGCCGGCTCTGTTTTTCTGTAAATAAATTTGCATATTTTGTAGGACTTTTAAT 3213
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 3214 TGTAATGATAGAGAAAAAAACAAGGAAAACTATTTAATGAAAGCACGATATTTATCTTTGGTAAATGACTTTAG 3287
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 3288 AGCAGTTAAAGACATTGCTTAAAAAACTCAGAATCAGAAAAAACACTGAATTATTTAAGAACACATATATTTTA 3361
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 3362 AAGTATAACATATTTATTATAATTTATTTGCACCCTTGGGAAGATTGCTTTGGCATTCTGCCTTGATTCCTTCT 3435
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 3436 CATTGATGTCCAGGTCATCTGGAGGCCGGGGGTTCTCAGACCTACCAGTTTCCCTTTAGAAGAACAAATTTCCA 3509
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 3510 GTTCCTCTAGGGCCTCCTGCCTTTCCTTTCTTTCTGTCAATTTTGTTGTTGTTGTTGTTTTTCATTTTCTTTTT 3583
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 3584 TTCTCTTGACTCCTCCTTTTAGGATGTCCAGATGTAAAAAAAAAAAAAAAAAAAAGAAAAAAAGAAAAAAAAAA 3657
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 3658 GAAAACAGCTGCAGTTCAGTACAACTGCTCTTTTCACACTCAACTCCCTAAAACTCCTTGTAACCTTCTGTAAC 3731
Query 1453 ------------------------------------------------------ 1452
Sbjct 3732 TATTGGATGACGCTTTCTCCAGCTTAGCCCTAAATAAAGCACAGTTTAAAAAAA 3785
