Nucleotide Global Alignment

Description

Query:
TRCN0000475751
Subject:
XR_001782321.1
Aligned Length:
4269
Identities:
1359
Gaps:
2844

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TGGCAGGGAACTTGAACCGGTCCAGCCTGTTTAAACCGAAAGGACAGAGATCCTGTCTGTTCAATGTAAAAAAA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AAAAAAAGAAGAAGAAGAAAAAAATCACATCAGACCGAGAGAGAGAGAGAGAGAGAGAGGGAGAGAGAGAGAGA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GAGAGAGAGAGAGAGAGAGAGAGAGAGAAGGAAGAAGAAGAGGGAGAGAGAGAGAGAGAGAGAGAAGAGAGAAG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AGAGAGAGAAGAGAGAGAGAAGAGAGAAATAGAACGAGAGCCCAGAGCAGAGCAAGGTGTAGGAAACCAAAGGG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GAGAGAACCCGAGTGTGTGCGTGTGTGTATGAGTGTGTGTGAGTGTGTGTGTGTGTGTGCGCGCGTGTGTGAGT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GTGTGTGTGTGAGTGTGTGTGTGTGTGTGTGTGAGAGTGTGTGTGCGTGTGTGTGTGTGTGTGAGTGTGTGTGT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GTGCGTGTGCGTGTGTGAGCGCGAGCGAGCGAGTGAGGGAGAGGAGCGAGAGAGTGCGAGCGAGAAAGAATAAA  518

Query    1  -----------------ATGTATATAAAGATGGCCACGTTAGCAAACGGACAGGCTGACAACGCAAGCCTCAGT  57
                             |||||||||||||||||||||||||||||||||||||||||||||||.|||||||||
Sbjct  519  AGGAAAGATTTTTCTCTATGTATATAAAGATGGCCACGTTAGCAAACGGACAGGCTGACAACGCGAGCCTCAGT  592

Query   58  ACCAACGGGCTCGGCAGCAGCCCGGGCAGTGCCGGGCACATGAACGGATTAAGCCACAGCCCGGGGAACCCGTC  131
            |||||||||||.|||||||||||||||||.||||||||.|||||||||||||||||||||||||||||||||||
Sbjct  593  ACCAACGGGCTAGGCAGCAGCCCGGGCAGCGCCGGGCATATGAACGGATTAAGCCACAGCCCGGGGAACCCGTC  666

Query  132  GACCATTCCCATGAAGGACCATGATGCCATCAAGCTGTTCATTGGGCAGATCCCCCGCAACCTGGATGAGAAGG  205
            |||||||||||||||||||||.|||||||||||||||||||||||||||||||||||.||||||||||||||||
Sbjct  667  GACCATTCCCATGAAGGACCACGATGCCATCAAGCTGTTCATTGGGCAGATCCCCCGAAACCTGGATGAGAAGG  740

Query  206  ACCTCAAGCCCCTCTTCGAGGAGTTTGGCAAAATCTACGAGCTTACGGTTCTGAAGGACAGGTTCACAGGCATG  279
            |||||||||||||||||||||||||.|||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  ACCTCAAGCCCCTCTTCGAGGAGTTCGGCAAGATCTACGAGCTTACGGTTCTGAAGGACAGGTTCACAGGCATG  814

Query  280  CACAAAGGCTGCGCCTTCCTCACCTACTGCGAGCGTGAGTCAGCGCTGAAGGCCCAGAGCGCGCTGCACGAGCA  353
            ||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  CACAAAGGCTGCGCTTTCCTCACCTACTGCGAGCGTGAGTCAGCGCTGAAGGCCCAGAGCGCGCTGCACGAGCA  888

Query  354  GAAGACTCTGCCCGGGATGAACCGGCCGATCCAGGTGAAGCCTGCGGACAGCGAGAGCCGAGGAGGTAGTAGCT  427
            ||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         
Sbjct  889  GAAGACCCTGCCCGGGATGAACCGGCCGATCCAGGTGAAGCCTGCGGACAGCGAGAGCCGAGGAG---------  953

Query  428  GCCTGCGCCAGCCCCCTTCACATAGAAAACTCTTCGTGGGCATGCTCAACAAGCAACAGTCCGAGGACGACGTG  501
                              .|.|||||||||||||||||||.|||||||||||||||||.||.||||||||||||
Sbjct  954  ------------------AAGATAGAAAACTCTTCGTGGGTATGCTCAACAAGCAACAATCTGAGGACGACGTG  1009

Query  502  CGCCGCCTTTTCGAGGCCTTTGGGAACATCGAGGAGTGCACCATCCTGCGCGGGCCCGACGGCAACAGCAAGGG  575
            ||||||||.|||||||||||.||||||||||||||||||||.||||||||||||||.|||||||||||||||||
Sbjct 1010  CGCCGCCTCTTCGAGGCCTTCGGGAACATCGAGGAGTGCACTATCCTGCGCGGGCCGGACGGCAACAGCAAGGG  1083

Query  576  GTGCGCCTTTGTGAAGTACTCCTCCCACGCCGAGGCGCAGGCCGCCATCAACGCGCTACACGGCAGCCAGACCA  649
            |||||||||||||||||||||||||||.||||||||.||.||||||||||||||.|||||.|||||||||||||
Sbjct 1084  GTGCGCCTTTGTGAAGTACTCCTCCCATGCCGAGGCACAAGCCGCCATCAACGCTCTACATGGCAGCCAGACCA  1157

Query  650  TGCCGGGAGCCTCGTCCAGTCTGGTGGTCAAGTTCGCCGACACCGACAAGGAGCGCACGATGCGGCGAATGCAG  723
            ||||.||||||||.|||||.||||||||||||||.||.|||||.||||||||||||||.|||||.||.||||||
Sbjct 1158  TGCCTGGAGCCTCCTCCAGCCTGGTGGTCAAGTTTGCAGACACTGACAAGGAGCGCACAATGCGACGGATGCAG  1231

Query  724  CAGATGGCTGGCCAGATGGGCATGTTCAACCCCATGGCCATCCCTTTCGGGGCCTACGGCGCCTACGCTCAGGC  797
            ||||||||||||||||||||||||||||||||||||||||||||.|||||.|||||.||||||||.||||||||
Sbjct 1232  CAGATGGCTGGCCAGATGGGCATGTTCAACCCCATGGCCATCCCCTTCGGAGCCTATGGCGCCTATGCTCAGGC  1305

Query  798  ACTGATGCAGCAGCAAGCGGCCCTGATGGCATCAGTCGCGCAGGGCGGCTACCTGAACCCCATGGCTGCCTTCG  871
            ||||||||||||||||||.|||||.||||||||.||||||||.||.|||||||||||.||||||||||||||||
Sbjct 1306  ACTGATGCAGCAGCAAGCAGCCCTCATGGCATCGGTCGCGCAAGGAGGCTACCTGAATCCCATGGCTGCCTTCG  1379

Query  872  CTGCCGCCCAGATGCAGCAGATGGCGGCCCTCAACATGAATGGCCTGGCGGCCGCACCTATGACCCCAACCTCA  945
            ||||||||||.||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||
Sbjct 1380  CTGCCGCCCAAATGCAGCAGATGGCGGCCCTCAACATGAATGGCCTGGCAGCCGCACCTATGACCCCAACCTCA  1453

Query  946  GGTGGCAGCACCCCTCCGGGCATCACTGCACCAGCCGTGCCTAGCATCCCATCCCCCATTGGGGTGAATGGCTT  1019
            |||||||||||||||||.|||||||||||||||||.||||||||||||||||||||||||||||||||.|||||
Sbjct 1454  GGTGGCAGCACCCCTCCAGGCATCACTGCACCAGCTGTGCCTAGCATCCCATCCCCCATTGGGGTGAACGGCTT  1527

Query 1020  CACCGGCCTCCCCCCACAGGCCAATGGGCAACCTGCTGCGGAAGCTGTGTTCGCCAATGGCATCCACCCCTACC  1093
            |||.|||||||||||.||||||||||||||.||||||||||||||||||||.|||||||||||.||||||||||
Sbjct 1528  CACGGGCCTCCCCCCTCAGGCCAATGGGCAGCCTGCTGCGGAAGCTGTGTTTGCCAATGGCATTCACCCCTACC  1601

Query 1094  CAGCACAGAGCCCCACCGCCGCGGACCCCCTGCAGCAGGCCTACGCCGGAGTGCAGCAGTATGCAGCAGCTGCC  1167
            |||||||||||||||||||.||.|||||||||||||||||||||||.|||||||||||||||||||.|.|||||
Sbjct 1602  CAGCACAGAGCCCCACCGCAGCCGACCCCCTGCAGCAGGCCTACGCTGGAGTGCAGCAGTATGCAGGACCTGCC  1675

Query 1168  TACCCTGCTGCCTATGGTCAGATAAGCCAGGCCTTTCCTCAGCCGCCTCCAATGATCCCCCAGCAGCAGAGAGA  1241
            |||||||||||||||||||||||.||||||||||||||||||||.||.||||||||.||||||||.||||||||
Sbjct 1676  TACCCTGCTGCCTATGGTCAGATTAGCCAGGCCTTTCCTCAGCCACCGCCAATGATTCCCCAGCAACAGAGAGA  1749

Query 1242  AGGGCCCGAGGGCTGTAACCTGTTCATCTACCATCTGCCCCAGGAGTTTGGGGACGCTGAGCTGATGCAGATGT  1315
            ||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1750  AGGGCCCGAGGGCTGTAACCTGCTCATCTACCATCTGCCCCAGGAGTTTGGGGACGCTGAGCTGATGCAGATGT  1823

Query 1316  TCCTCCCTTTC------------------------------------------------------------GGC  1329
            |||||||||||                                                            |||
Sbjct 1824  TCCTCCCTTTCGGTAATGTCATCTCCTCGAAAGTGTTTGTGGATCGGGCGACTAACCAAAGTAAATGCTTTGGC  1897

Query 1330  TTCGTGAGCTTCGACAACCCGGCCAGCGCGCAGACCGCCATCCAGGCCATGAACGGCTTCCAGATCGGCATGAA  1403
            |||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||.||||||||
Sbjct 1898  TTCGTGAGCTTCGACAACCCGGCCAGCGCACAGACCGCCATCCAGGCCATGAACGGCTTCCAGATAGGCATGAA  1971

Query 1404  GAGGCTCAAGGTGCAGCTGAAGCGGCCCAAAGACGCCAATCGCCCGTAC-------------------------  1452
            |||||||||||||||||||||||||||||||||||||||||||||||||                         
Sbjct 1972  GAGGCTCAAGGTGCAGCTGAAGCGGCCCAAAGACGCCAATCGCCCGTACTGAGCGCCGGCGGGAGCGTCCCCCG  2045

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2046  GGGGAGACCAGGACTCGCACAGGGCCAGTCAAATCCACCACAGTCTCGCGCTGAGCTAGGAATAAAGTTCACGT  2119

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2120  AATCACATGAGAGTGGAGAAAAGTCCCCCATCCGGCAGGATGCTGAACGGGCTACATTAAAAACAAACCTCTTT  2193

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2194  CTCTCTCTATTTATAAATGAGAACTGTTGGACGACACCTTTGACATATCAGCCAATACCAATCAAGCTGACGAC  2267

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2268  TCCAGACACTCCGTGTGACTGTAACATTTCTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTT  2341

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2342  TGGGGAAAAATATACATGACATAAAGATGACGACGAAGAAGAAAAATGATATAAAACAAACAAAAAACCCGCGA  2415

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2416  CTTTAAAATGAAATAACGTGAGCCCAGATGGGGAAGCTGAAGGGCTGGGCACTAGGAGGAGATGCTGCTGCCAA  2489

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2490  CCGATCCTGGGGCTTTTCCCGCCCGTAGGCGCCTGAGGCAGGCAGGGGCAAGTGTACAATGGGGCCTAGTCCCC  2563

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2564  AGCAGGCGGCTGGGAGGCCGCCACTGAGCATCTCTATTTGTCATTCCTTTAGCTATTTAGGGACCAAAGGACCA  2637

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2638  AACTTTTTATTGCAGATGTGTAGCTCTGTCAATTAGAGGTGGAATGGAGACCAACCTCCTTCCTGCCTCCTGGC  2711

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2712  TGTTCTTGAAACAGCTTAGAGCGATTCTATGAAAATGTAATAAAAAATAAAAATAAAAAAAAAATAAAAAAAGA  2785

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2786  ACAAAAAAAACAAGGAAAAAAAATAATGCTTCAACGCTTTTAAAACAGCAAGATACTAGTTCTTTGATACTTTG  2859

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2860  AGAGGCGCTTTGATTACCCCGATTGAAGTCTCTGAAACTTTCCTATGGTTTTCTGTATTATATGTCTGGATGGA  2933

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2934  GCTGTTTAGATACATTGATTGGTGGATATTTGGAGAAAGCAACAAAGATATTAAGTCATTAACCATGAAGAGAA  3007

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3008  CACGAGGGGAACCAGGGGACTTCGAAGGCAAGGTAATTGTTGTGAAAAGTCTGTAAATGCTTCTAATTCTTCCC  3081

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3082  CCCTCTTAAAATCATAATAGTTGTACAGAATTTTAAAAGGAAAAGTTTAAAATACCTATATCATAGAAGAAAAA  3155

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3156  AAAATTAGAGGAAAGCAAAAAAATAAAAAAAAAAAGGAAAAAAAAACCTTATAGAAGTTAGCATTATGCTAAAA  3229

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3230  TCCCAGATGTTGTAGGACTGTACTTCTGTAGAGTTTAGACTGAGCATCGATCCCGTCTCCCCGCGAGTGCTGTC  3303

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3304  GGACTCCGTCCCCAAGGGCCAGGCCGGACTGTCCAGACCTGCAGGCTCCGGCCAGAAGCGCCGCTCCGGAAGCG  3377

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3378  TCCTGCCGCCTCTCGCTTTGCCAGCCTGGGAGCCGCGCGCATGCGCGCTCTCTCTGCCCTTCTCACCTCTGCTT  3451

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3452  CACTCGCCTTCTGTGCTTGTTCCGGAGACTTTCCAGGCCAGGGAGAACTGGGAACTTCTCATCTTCAAACAACT  3525

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3526  AGACAACACACACACACACAAAACCTTAAACAAGAGAGAGAAAACAAACAATCTTTGAAGAATTTCTGAAACTG  3599

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3600  TTTACAAGGAATTTTGAAAAACAGGGATGTTTAAATGATGCTGGCTCTGTTTTTCTGTAAATAAATTTGCATAT  3673

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3674  TTTGTAGGACTTTTAATTGTAATGATAGAGAAAAAACAAGGAAAACTATTTAATGAAAGCACGATATTTATCTT  3747

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3748  TGGTAAATGACTTTAGAGCAGTTAAAGACATTGCTTAAAAACTCAGAATCAGAAAAACACTGAATTATTTAAGA  3821

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3822  ACACATATATTTTAAAGTATAACATATTTATTATAATTTATTTGCACCTTGGGAAGACTTGCTTTGCATTCTGC  3895

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3896  CTCAAGAGCTTCTCATTGATGTCCATCTGGAGGCCAGGGGGGTCTTGGAACTACCATTTTTTTTTCCTTTAGAT  3969

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3970  CAACAAAATTCTGGTTGCCCTCAGGCCTCCTTCCTTTTCTTTCCATCTATTTTGTTGTTGTTTTACTTCATTTA  4043

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 4044  GTTTTCTTTTTCTTTCTCTTGACTCCTCCTTTTAGGATGTCCAGATGTTGTAAAAAAACAAAAACAAAAAACCC  4117

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 4118  AACAGCTGCAGTTCAATACAACTGCTCTTTTCACACGACTCCCTAAACTCCTTGTAACCTTCTGTAACTATTGG  4191

Query 1453  ---------------------------------------------------  1452
                                                               
Sbjct 4192  ATGACGCTTTCTCCAGCTTAGCCCTAAATAAAGCACAGTTTAAAAAAAAAA  4242

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