Nucleotide Global Alignment
Description
- Query:
- TRCN0000475751
- Subject:
- XR_001782325.1
- Aligned Length:
- 4212
- Identities:
- 1390
- Gaps:
- 2760
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TGGCAGGGAACTTGAACCGGTCCAGCCTGTTTAAACCGAAAGGACAGAGATCCTGTCTGTTCAATGTAAAAAAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AAAAAAAGAAGAAGAAGAAAAAAATCACATCAGACCGAGAGAGAGAGAGAGAGAGAGAGGGAGAGAGAGAGAGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GAGAGAGAGAGAGAGAGAGAGAGAGAGAAGGAAGAAGAAGAGGGAGAGAGAGAGAGAGAGAGAGAAGAGAGAAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGAGAGAGAAGAGAGAGAGAAGAGAGAAATAGAACGAGAGCCCAGAGCAGAGCAAGGTGTAGGAAACCAAAGGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAGAGAACCCGAGTGTGTGCGTGTGTGTATGAGTGTGTGTGAGTGTGTGTGTGTGTGTGCGCGCGTGTGTGAGT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GTGTGTGTGTGAGTGTGTGTGTGTGTGTGTGTGAGAGTGTGTGTGCGTGTGTGTGTGTGTGTGAGTGTGTGTGT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GTGCGTGTGCGTGTGTGAGCGCGAGCGAGCGAGTGAGGGAGAGGAGCGAGAGAGTGCGAGCGAGAAAGAATAAA 518
Query 1 -----------------ATGTATATAAAGATGGCCACGTTAGCAAACGGACAGGCTGACAACGCAAGCCTCAGT 57
|||||||||||||||||||||||||||||||||||||||||||||||.|||||||||
Sbjct 519 AGGAAAGATTTTTCTCTATGTATATAAAGATGGCCACGTTAGCAAACGGACAGGCTGACAACGCGAGCCTCAGT 592
Query 58 ACCAACGGGCTCGGCAGCAGCCCGGGCAGTGCCGGGCACATGAACGGATTAAGCCACAGCCCGGGGAACCCGTC 131
|||||||||||.|||||||||||||||||.||||||||.|||||||||||||||||||||||||||||||||||
Sbjct 593 ACCAACGGGCTAGGCAGCAGCCCGGGCAGCGCCGGGCATATGAACGGATTAAGCCACAGCCCGGGGAACCCGTC 666
Query 132 GACCATTCCCATGAAGGACCATGATGCCATCAAGCTGTTCATTGGGCAGATCCCCCGCAACCTGGATGAGAAGG 205
|||||||||||||||||||||.|||||||||||||||||||||||||||||||||||.||||||||||||||||
Sbjct 667 GACCATTCCCATGAAGGACCACGATGCCATCAAGCTGTTCATTGGGCAGATCCCCCGAAACCTGGATGAGAAGG 740
Query 206 ACCTCAAGCCCCTCTTCGAGGAGTTTGGCAAAATCTACGAGCTTACGGTTCTGAAGGACAGGTTCACAGGCATG 279
|||||||||||||||||||||||||.|||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 ACCTCAAGCCCCTCTTCGAGGAGTTCGGCAAGATCTACGAGCTTACGGTTCTGAAGGACAGGTTCACAGGCATG 814
Query 280 CACAAAGGCTGCGCCTTCCTCACCTACTGCGAGCGTGAGTCAGCGCTGAAGGCCCAGAGCGCGCTGCACGAGCA 353
||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CACAAAGGCTGCGCTTTCCTCACCTACTGCGAGCGTGAGTCAGCGCTGAAGGCCCAGAGCGCGCTGCACGAGCA 888
Query 354 GAAGACTCTGCCCGGGATGAACCGGCCGATCCAGGTGAAGCCTGCGGACAGCGAGAGCCGAGGAGGTAGTAGCT 427
||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GAAGACCCTGCCCGGGATGAACCGGCCGATCCAGGTGAAGCCTGCGGACAGCGAGAGCCGAGGAGGTAGTAGCT 962
Query 428 GCCTGCGCCAGCCCCCTTCACATAGAAAACTCTTCGTGGGCATGCTCAACAAGCAACAGTCCGAGGACGACGTG 501
||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||.||.||||||||||||
Sbjct 963 GCCTGCGCCAGCCCCCTTCACATAGAAAACTCTTCGTGGGTATGCTCAACAAGCAACAATCTGAGGACGACGTG 1036
Query 502 CGCCGCCTTTTCGAGGCCTTTGGGAACATCGAGGAGTGCACCATCCTGCGCGGGCCCGACGGCAACAGCAAGGG 575
||||||||.|||||||||||.||||||||||||||||||||.||||||||||||||.|||||||||||||||||
Sbjct 1037 CGCCGCCTCTTCGAGGCCTTCGGGAACATCGAGGAGTGCACTATCCTGCGCGGGCCGGACGGCAACAGCAAGGG 1110
Query 576 GTGCGCCTTTGTGAAGTACTCCTCCCACGCCGAGGCGCAGGCCGCCATCAACGCGCTACACGGCAGCCAGACCA 649
|||||||||||||||||||||||||||.||||||||.||.||||||||||||||.|||||.|||||||||||||
Sbjct 1111 GTGCGCCTTTGTGAAGTACTCCTCCCATGCCGAGGCACAAGCCGCCATCAACGCTCTACATGGCAGCCAGACCA 1184
Query 650 TGCCGGGAGCCTCGTCCAGTCTGGTGGTCAAGTTCGCCGACACCGACAAGGAGCGCACGATGCGGCGAATGCAG 723
||||.||||||||.|||||.||||||||||||||.||.|||||.||||||||||||||.|||||.||.||||||
Sbjct 1185 TGCCTGGAGCCTCCTCCAGCCTGGTGGTCAAGTTTGCAGACACTGACAAGGAGCGCACAATGCGACGGATGCAG 1258
Query 724 CAGATGGCTGGCCAGATGGGCATGTTCAACCCCATGGCCATCCCTTTCGGGGCCTACGGCGCCTACGCTCAGGC 797
||||||||||||||||||||||||||||||||||||||||||||.|||||.|||||.||||||||.||||||||
Sbjct 1259 CAGATGGCTGGCCAGATGGGCATGTTCAACCCCATGGCCATCCCCTTCGGAGCCTATGGCGCCTATGCTCAGGC 1332
Query 798 ACTGATGCAGCAGCAAGCGGCCCTGATGGCATCAGTCGCGCAGGGCGGCTACCTGAACCCCATGGCTGCCTTCG 871
||||||||||||||||||.|||||.||||||||.||||||||.||.|||||||||||.||||||||||||||||
Sbjct 1333 ACTGATGCAGCAGCAAGCAGCCCTCATGGCATCGGTCGCGCAAGGAGGCTACCTGAATCCCATGGCTGCCTTCG 1406
Query 872 CTGCCGCCCAGATGCAGCAGATGGCGGCCCTCAACATGAATGGCCTGGCGGCCGCACCTATGACCCCAACCTCA 945
||||||||||.||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||
Sbjct 1407 CTGCCGCCCAAATGCAGCAGATGGCGGCCCTCAACATGAATGGCCTGGCAGCCGCACCTATGACCCCAACCTCA 1480
Query 946 GGTGGCAGCACCCCTCCGGGCATCACTGCACCAGCCGTGCCTAGCATCCCATCCCCCATTGGGGTGAATGGCTT 1019
|||||||||||||||||.|||||||||||||||||.||||||||||||||||||||||||||||||||.|||||
Sbjct 1481 GGTGGCAGCACCCCTCCAGGCATCACTGCACCAGCTGTGCCTAGCATCCCATCCCCCATTGGGGTGAACGGCTT 1554
Query 1020 CACCGGCCTCCCCCCACAGGCCAATGGGCAACCTGCTGCGGAAGCTGTGTTCGCCAATGGCATCCACCCCTACC 1093
|||.|||||||||||.||||||||||||||.||||||||||||||||||||.|||||||||||.||||||||||
Sbjct 1555 CACGGGCCTCCCCCCTCAGGCCAATGGGCAGCCTGCTGCGGAAGCTGTGTTTGCCAATGGCATTCACCCCTACC 1628
Query 1094 CAGCACAGAGCCCCACCGCCGCGGACCCCCTGCAGCAGGCCTACGCCGGAGTGCAGCAGTATGCAG---CAGCT 1164
|||||||||||||||||||.||.|||||||||||||||||||||||.||||||||||||||||||| |||||
Sbjct 1629 CAGCACAGAGCCCCACCGCAGCCGACCCCCTGCAGCAGGCCTACGCTGGAGTGCAGCAGTATGCAGGACCAGCT 1702
Query 1165 GCCTACCCTGCTGCCTATGGTCAGATAAGCCAGGCCTTTCCTCAGCCGCCTCCAATGATCCCCCAGCAGCAGAG 1238
||||||||||||||||||||||||||.||||||||||||||||||||.||.||||||||.||||||||.|||||
Sbjct 1703 GCCTACCCTGCTGCCTATGGTCAGATTAGCCAGGCCTTTCCTCAGCCACCGCCAATGATTCCCCAGCAACAGAG 1776
Query 1239 AGAAGGGCCCGAGGGCTGTAACCTGTTCATCTACCATCTGCCCCAGGAGTTTGGGGACGCTGAGCTGATGCAGA 1312
|||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 AGAAGGGCCCGAGGGCTGTAACCTGCTCATCTACCATCTGCCCCAGGAGTTTGGGGACGCTGAGCTGATGCAGA 1850
Query 1313 TGTTCCTCCCTTTCGGCTTCGTGAGCTTCGACAACCCGGCCAGCGCGCAGACCGCCATCCAGGCCATGAACGGC 1386
||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||
Sbjct 1851 TGTTCCTCCCTTTCGGCTTCGTGAGCTTCGACAACCCGGCCAGCGCACAGACCGCCATCCAGGCCATGAACGGC 1924
Query 1387 TTCCAGATCGGCATGAAGAGGCTCAAGGTGCAGCTGAAGCGGCCCAAAGACGCCAATCGCCCGTAC-------- 1452
||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 TTCCAGATAGGCATGAAGAGGCTCAAGGTGCAGCTGAAGCGGCCCAAAGACGCCAATCGCCCGTACTGAGCGCC 1998
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 1999 GGCGGGAGCGTCCCCCGGGGGAGACCAGGACTCGCACAGGGCCAGTCAAATCCACCACAGTCTCGCGCTGAGCT 2072
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 2073 AGGAATAAAGTTCACGTAATCACATGAGAGTGGAGAAAAGTCCCCCATCCGGCAGGATGCTGAACGGGCTACAT 2146
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 2147 TAAAAACAAACCTCTTTCTCTCTCTATTTATAAATGAGAACTGTTGGACGACACCTTTGACATATCAGCCAATA 2220
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 2221 CCAATCAAGCTGACGACTCCAGACACTCCGTGTGACTGTAACATTTCTTCAAGGAAAGTATAGCGTCTATGGAG 2294
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 2295 TGCAGAGGGCATGTGTTTGGGGAAAAATATACATGACATAAAGATGACGACGAAGAAGAAAAATGATATAAAAC 2368
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 2369 AAACAAAAAACCCGCGACTTTAAAATGAAATAACGTGAGCCCAGATGGGGAAGCTGAAGGGCTGGGCACTAGGA 2442
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 2443 GGAGATGCTGCTGCCAACCGATCCTGGGGCTTTTCCCGCCCGTAGGCGCCTGAGGCAGGCAGGGGCAAGTGTAC 2516
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 2517 AATGGGGCCTAGTCCCCAGCAGGCGGCTGGGAGGCCGCCACTGAGCATCTCTATTTGTCATTCCTTTAGCTATT 2590
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 2591 TAGGGACCAAAGGACCAAACTTTTTATTGCAGATGTGTAGCTCTGTCAATTAGAGGTGGAATGGAGACCAACCT 2664
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 2665 CCTTCCTGCCTCCTGGCTGTTCTTGAAACAGCTTAGAGCGATTCTATGAAAATGTAATAAAAAATAAAAATAAA 2738
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 2739 AAAAAAATAAAAAAAGAACAAAAAAAACAAGGAAAAAAAATAATGCTTCAACGCTTTTAAAACAGCAAGATACT 2812
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 2813 AGTTCTTTGATACTTTGAGAGGCGCTTTGATTACCCCGATTGAAGTCTCTGAAACTTTCCTATGGTTTTCTGTA 2886
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 2887 TTATATGTCTGGATGGAGCTGTTTAGATACATTGATTGGTGGATATTTGGAGAAAGCAACAAAGATATTAAGTC 2960
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 2961 ATTAACCATGAAGAGAACACGAGGGGAACCAGGGGACTTCGAAGGCAAGGTAATTGTTGTGAAAAGTCTGTAAA 3034
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 3035 TGCTTCTAATTCTTCCCCCCTCTTAAAATCATAATAGTTGTACAGAATTTTAAAAGGAAAAGTTTAAAATACCT 3108
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 3109 ATATCATAGAAGAAAAAAAAATTAGAGGAAAGCAAAAAAATAAAAAAAAAAAGGAAAAAAAAACCTTATAGAAG 3182
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 3183 TTAGCATTATGCTAAAATCCCAGATGTTGTAGGACTGTACTTCTGTAGAGTTTAGACTGAGCATCGATCCCGTC 3256
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 3257 TCCCCGCGAGTGCTGTCGGACTCCGTCCCCAAGGGCCAGGCCGGACTGTCCAGACCTGCAGGCTCCGGCCAGAA 3330
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 3331 GCGCCGCTCCGGAAGCGTCCTGCCGCCTCTCGCTTTGCCAGCCTGGGAGCCGCGCGCATGCGCGCTCTCTCTGC 3404
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 3405 CCTTCTCACCTCTGCTTCACTCGCCTTCTGTGCTTGTTCCGGAGACTTTCCAGGCCAGGGAGAACTGGGAACTT 3478
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 3479 CTCATCTTCAAACAACTAGACAACACACACACACACAAAACCTTAAACAAGAGAGAGAAAACAAACAATCTTTG 3552
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 3553 AAGAATTTCTGAAACTGTTTACAAGGAATTTTGAAAAACAGGGATGTTTAAATGATGCTGGCTCTGTTTTTCTG 3626
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 3627 TAAATAAATTTGCATATTTTGTAGGACTTTTAATTGTAATGATAGAGAAAAAACAAGGAAAACTATTTAATGAA 3700
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 3701 AGCACGATATTTATCTTTGGTAAATGACTTTAGAGCAGTTAAAGACATTGCTTAAAAACTCAGAATCAGAAAAA 3774
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 3775 CACTGAATTATTTAAGAACACATATATTTTAAAGTATAACATATTTATTATAATTTATTTGCACCTTGGGAAGA 3848
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 3849 CTTGCTTTGCATTCTGCCTCAAGAGCTTCTCATTGATGTCCATCTGGAGGCCAGGGGGGTCTTGGAACTACCAT 3922
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 3923 TTTTTTTTCCTTTAGATCAACAAAATTCTGGTTGCCCTCAGGCCTCCTTCCTTTTCTTTCCATCTATTTTGTTG 3996
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 3997 TTGTTTTACTTCATTTAGTTTTCTTTTTCTTTCTCTTGACTCCTCCTTTTAGGATGTCCAGATGTTGTAAAAAA 4070
Query 1453 -------------------------------------------------------------------------- 1452
Sbjct 4071 ACAAAAACAAAAAACCCAACAGCTGCAGTTCAATACAACTGCTCTTTTCACACGACTCCCTAAACTCCTTGTAA 4144
Query 1453 -------------------------------------------------------------------- 1452
Sbjct 4145 CCTTCTGTAACTATTGGATGACGCTTTCTCCAGCTTAGCCCTAAATAAAGCACAGTTTAAAAAAAAAA 4212
