Nucleotide Global Alignment

Description

Query:
TRCN0000475751
Subject:
XR_001782325.1
Aligned Length:
4212
Identities:
1390
Gaps:
2760

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TGGCAGGGAACTTGAACCGGTCCAGCCTGTTTAAACCGAAAGGACAGAGATCCTGTCTGTTCAATGTAAAAAAA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AAAAAAAGAAGAAGAAGAAAAAAATCACATCAGACCGAGAGAGAGAGAGAGAGAGAGAGGGAGAGAGAGAGAGA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GAGAGAGAGAGAGAGAGAGAGAGAGAGAAGGAAGAAGAAGAGGGAGAGAGAGAGAGAGAGAGAGAAGAGAGAAG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AGAGAGAGAAGAGAGAGAGAAGAGAGAAATAGAACGAGAGCCCAGAGCAGAGCAAGGTGTAGGAAACCAAAGGG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GAGAGAACCCGAGTGTGTGCGTGTGTGTATGAGTGTGTGTGAGTGTGTGTGTGTGTGTGCGCGCGTGTGTGAGT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GTGTGTGTGTGAGTGTGTGTGTGTGTGTGTGTGAGAGTGTGTGTGCGTGTGTGTGTGTGTGTGAGTGTGTGTGT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GTGCGTGTGCGTGTGTGAGCGCGAGCGAGCGAGTGAGGGAGAGGAGCGAGAGAGTGCGAGCGAGAAAGAATAAA  518

Query    1  -----------------ATGTATATAAAGATGGCCACGTTAGCAAACGGACAGGCTGACAACGCAAGCCTCAGT  57
                             |||||||||||||||||||||||||||||||||||||||||||||||.|||||||||
Sbjct  519  AGGAAAGATTTTTCTCTATGTATATAAAGATGGCCACGTTAGCAAACGGACAGGCTGACAACGCGAGCCTCAGT  592

Query   58  ACCAACGGGCTCGGCAGCAGCCCGGGCAGTGCCGGGCACATGAACGGATTAAGCCACAGCCCGGGGAACCCGTC  131
            |||||||||||.|||||||||||||||||.||||||||.|||||||||||||||||||||||||||||||||||
Sbjct  593  ACCAACGGGCTAGGCAGCAGCCCGGGCAGCGCCGGGCATATGAACGGATTAAGCCACAGCCCGGGGAACCCGTC  666

Query  132  GACCATTCCCATGAAGGACCATGATGCCATCAAGCTGTTCATTGGGCAGATCCCCCGCAACCTGGATGAGAAGG  205
            |||||||||||||||||||||.|||||||||||||||||||||||||||||||||||.||||||||||||||||
Sbjct  667  GACCATTCCCATGAAGGACCACGATGCCATCAAGCTGTTCATTGGGCAGATCCCCCGAAACCTGGATGAGAAGG  740

Query  206  ACCTCAAGCCCCTCTTCGAGGAGTTTGGCAAAATCTACGAGCTTACGGTTCTGAAGGACAGGTTCACAGGCATG  279
            |||||||||||||||||||||||||.|||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  ACCTCAAGCCCCTCTTCGAGGAGTTCGGCAAGATCTACGAGCTTACGGTTCTGAAGGACAGGTTCACAGGCATG  814

Query  280  CACAAAGGCTGCGCCTTCCTCACCTACTGCGAGCGTGAGTCAGCGCTGAAGGCCCAGAGCGCGCTGCACGAGCA  353
            ||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  CACAAAGGCTGCGCTTTCCTCACCTACTGCGAGCGTGAGTCAGCGCTGAAGGCCCAGAGCGCGCTGCACGAGCA  888

Query  354  GAAGACTCTGCCCGGGATGAACCGGCCGATCCAGGTGAAGCCTGCGGACAGCGAGAGCCGAGGAGGTAGTAGCT  427
            ||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GAAGACCCTGCCCGGGATGAACCGGCCGATCCAGGTGAAGCCTGCGGACAGCGAGAGCCGAGGAGGTAGTAGCT  962

Query  428  GCCTGCGCCAGCCCCCTTCACATAGAAAACTCTTCGTGGGCATGCTCAACAAGCAACAGTCCGAGGACGACGTG  501
            ||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||.||.||||||||||||
Sbjct  963  GCCTGCGCCAGCCCCCTTCACATAGAAAACTCTTCGTGGGTATGCTCAACAAGCAACAATCTGAGGACGACGTG  1036

Query  502  CGCCGCCTTTTCGAGGCCTTTGGGAACATCGAGGAGTGCACCATCCTGCGCGGGCCCGACGGCAACAGCAAGGG  575
            ||||||||.|||||||||||.||||||||||||||||||||.||||||||||||||.|||||||||||||||||
Sbjct 1037  CGCCGCCTCTTCGAGGCCTTCGGGAACATCGAGGAGTGCACTATCCTGCGCGGGCCGGACGGCAACAGCAAGGG  1110

Query  576  GTGCGCCTTTGTGAAGTACTCCTCCCACGCCGAGGCGCAGGCCGCCATCAACGCGCTACACGGCAGCCAGACCA  649
            |||||||||||||||||||||||||||.||||||||.||.||||||||||||||.|||||.|||||||||||||
Sbjct 1111  GTGCGCCTTTGTGAAGTACTCCTCCCATGCCGAGGCACAAGCCGCCATCAACGCTCTACATGGCAGCCAGACCA  1184

Query  650  TGCCGGGAGCCTCGTCCAGTCTGGTGGTCAAGTTCGCCGACACCGACAAGGAGCGCACGATGCGGCGAATGCAG  723
            ||||.||||||||.|||||.||||||||||||||.||.|||||.||||||||||||||.|||||.||.||||||
Sbjct 1185  TGCCTGGAGCCTCCTCCAGCCTGGTGGTCAAGTTTGCAGACACTGACAAGGAGCGCACAATGCGACGGATGCAG  1258

Query  724  CAGATGGCTGGCCAGATGGGCATGTTCAACCCCATGGCCATCCCTTTCGGGGCCTACGGCGCCTACGCTCAGGC  797
            ||||||||||||||||||||||||||||||||||||||||||||.|||||.|||||.||||||||.||||||||
Sbjct 1259  CAGATGGCTGGCCAGATGGGCATGTTCAACCCCATGGCCATCCCCTTCGGAGCCTATGGCGCCTATGCTCAGGC  1332

Query  798  ACTGATGCAGCAGCAAGCGGCCCTGATGGCATCAGTCGCGCAGGGCGGCTACCTGAACCCCATGGCTGCCTTCG  871
            ||||||||||||||||||.|||||.||||||||.||||||||.||.|||||||||||.||||||||||||||||
Sbjct 1333  ACTGATGCAGCAGCAAGCAGCCCTCATGGCATCGGTCGCGCAAGGAGGCTACCTGAATCCCATGGCTGCCTTCG  1406

Query  872  CTGCCGCCCAGATGCAGCAGATGGCGGCCCTCAACATGAATGGCCTGGCGGCCGCACCTATGACCCCAACCTCA  945
            ||||||||||.||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||
Sbjct 1407  CTGCCGCCCAAATGCAGCAGATGGCGGCCCTCAACATGAATGGCCTGGCAGCCGCACCTATGACCCCAACCTCA  1480

Query  946  GGTGGCAGCACCCCTCCGGGCATCACTGCACCAGCCGTGCCTAGCATCCCATCCCCCATTGGGGTGAATGGCTT  1019
            |||||||||||||||||.|||||||||||||||||.||||||||||||||||||||||||||||||||.|||||
Sbjct 1481  GGTGGCAGCACCCCTCCAGGCATCACTGCACCAGCTGTGCCTAGCATCCCATCCCCCATTGGGGTGAACGGCTT  1554

Query 1020  CACCGGCCTCCCCCCACAGGCCAATGGGCAACCTGCTGCGGAAGCTGTGTTCGCCAATGGCATCCACCCCTACC  1093
            |||.|||||||||||.||||||||||||||.||||||||||||||||||||.|||||||||||.||||||||||
Sbjct 1555  CACGGGCCTCCCCCCTCAGGCCAATGGGCAGCCTGCTGCGGAAGCTGTGTTTGCCAATGGCATTCACCCCTACC  1628

Query 1094  CAGCACAGAGCCCCACCGCCGCGGACCCCCTGCAGCAGGCCTACGCCGGAGTGCAGCAGTATGCAG---CAGCT  1164
            |||||||||||||||||||.||.|||||||||||||||||||||||.|||||||||||||||||||   |||||
Sbjct 1629  CAGCACAGAGCCCCACCGCAGCCGACCCCCTGCAGCAGGCCTACGCTGGAGTGCAGCAGTATGCAGGACCAGCT  1702

Query 1165  GCCTACCCTGCTGCCTATGGTCAGATAAGCCAGGCCTTTCCTCAGCCGCCTCCAATGATCCCCCAGCAGCAGAG  1238
            ||||||||||||||||||||||||||.||||||||||||||||||||.||.||||||||.||||||||.|||||
Sbjct 1703  GCCTACCCTGCTGCCTATGGTCAGATTAGCCAGGCCTTTCCTCAGCCACCGCCAATGATTCCCCAGCAACAGAG  1776

Query 1239  AGAAGGGCCCGAGGGCTGTAACCTGTTCATCTACCATCTGCCCCAGGAGTTTGGGGACGCTGAGCTGATGCAGA  1312
            |||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  AGAAGGGCCCGAGGGCTGTAACCTGCTCATCTACCATCTGCCCCAGGAGTTTGGGGACGCTGAGCTGATGCAGA  1850

Query 1313  TGTTCCTCCCTTTCGGCTTCGTGAGCTTCGACAACCCGGCCAGCGCGCAGACCGCCATCCAGGCCATGAACGGC  1386
            ||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||
Sbjct 1851  TGTTCCTCCCTTTCGGCTTCGTGAGCTTCGACAACCCGGCCAGCGCACAGACCGCCATCCAGGCCATGAACGGC  1924

Query 1387  TTCCAGATCGGCATGAAGAGGCTCAAGGTGCAGCTGAAGCGGCCCAAAGACGCCAATCGCCCGTAC--------  1452
            ||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||        
Sbjct 1925  TTCCAGATAGGCATGAAGAGGCTCAAGGTGCAGCTGAAGCGGCCCAAAGACGCCAATCGCCCGTACTGAGCGCC  1998

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 1999  GGCGGGAGCGTCCCCCGGGGGAGACCAGGACTCGCACAGGGCCAGTCAAATCCACCACAGTCTCGCGCTGAGCT  2072

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2073  AGGAATAAAGTTCACGTAATCACATGAGAGTGGAGAAAAGTCCCCCATCCGGCAGGATGCTGAACGGGCTACAT  2146

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2147  TAAAAACAAACCTCTTTCTCTCTCTATTTATAAATGAGAACTGTTGGACGACACCTTTGACATATCAGCCAATA  2220

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2221  CCAATCAAGCTGACGACTCCAGACACTCCGTGTGACTGTAACATTTCTTCAAGGAAAGTATAGCGTCTATGGAG  2294

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2295  TGCAGAGGGCATGTGTTTGGGGAAAAATATACATGACATAAAGATGACGACGAAGAAGAAAAATGATATAAAAC  2368

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2369  AAACAAAAAACCCGCGACTTTAAAATGAAATAACGTGAGCCCAGATGGGGAAGCTGAAGGGCTGGGCACTAGGA  2442

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2443  GGAGATGCTGCTGCCAACCGATCCTGGGGCTTTTCCCGCCCGTAGGCGCCTGAGGCAGGCAGGGGCAAGTGTAC  2516

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2517  AATGGGGCCTAGTCCCCAGCAGGCGGCTGGGAGGCCGCCACTGAGCATCTCTATTTGTCATTCCTTTAGCTATT  2590

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2591  TAGGGACCAAAGGACCAAACTTTTTATTGCAGATGTGTAGCTCTGTCAATTAGAGGTGGAATGGAGACCAACCT  2664

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2665  CCTTCCTGCCTCCTGGCTGTTCTTGAAACAGCTTAGAGCGATTCTATGAAAATGTAATAAAAAATAAAAATAAA  2738

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2739  AAAAAAATAAAAAAAGAACAAAAAAAACAAGGAAAAAAAATAATGCTTCAACGCTTTTAAAACAGCAAGATACT  2812

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2813  AGTTCTTTGATACTTTGAGAGGCGCTTTGATTACCCCGATTGAAGTCTCTGAAACTTTCCTATGGTTTTCTGTA  2886

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2887  TTATATGTCTGGATGGAGCTGTTTAGATACATTGATTGGTGGATATTTGGAGAAAGCAACAAAGATATTAAGTC  2960

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2961  ATTAACCATGAAGAGAACACGAGGGGAACCAGGGGACTTCGAAGGCAAGGTAATTGTTGTGAAAAGTCTGTAAA  3034

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3035  TGCTTCTAATTCTTCCCCCCTCTTAAAATCATAATAGTTGTACAGAATTTTAAAAGGAAAAGTTTAAAATACCT  3108

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3109  ATATCATAGAAGAAAAAAAAATTAGAGGAAAGCAAAAAAATAAAAAAAAAAAGGAAAAAAAAACCTTATAGAAG  3182

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3183  TTAGCATTATGCTAAAATCCCAGATGTTGTAGGACTGTACTTCTGTAGAGTTTAGACTGAGCATCGATCCCGTC  3256

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3257  TCCCCGCGAGTGCTGTCGGACTCCGTCCCCAAGGGCCAGGCCGGACTGTCCAGACCTGCAGGCTCCGGCCAGAA  3330

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3331  GCGCCGCTCCGGAAGCGTCCTGCCGCCTCTCGCTTTGCCAGCCTGGGAGCCGCGCGCATGCGCGCTCTCTCTGC  3404

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3405  CCTTCTCACCTCTGCTTCACTCGCCTTCTGTGCTTGTTCCGGAGACTTTCCAGGCCAGGGAGAACTGGGAACTT  3478

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3479  CTCATCTTCAAACAACTAGACAACACACACACACACAAAACCTTAAACAAGAGAGAGAAAACAAACAATCTTTG  3552

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3553  AAGAATTTCTGAAACTGTTTACAAGGAATTTTGAAAAACAGGGATGTTTAAATGATGCTGGCTCTGTTTTTCTG  3626

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3627  TAAATAAATTTGCATATTTTGTAGGACTTTTAATTGTAATGATAGAGAAAAAACAAGGAAAACTATTTAATGAA  3700

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3701  AGCACGATATTTATCTTTGGTAAATGACTTTAGAGCAGTTAAAGACATTGCTTAAAAACTCAGAATCAGAAAAA  3774

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3775  CACTGAATTATTTAAGAACACATATATTTTAAAGTATAACATATTTATTATAATTTATTTGCACCTTGGGAAGA  3848

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3849  CTTGCTTTGCATTCTGCCTCAAGAGCTTCTCATTGATGTCCATCTGGAGGCCAGGGGGGTCTTGGAACTACCAT  3922

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3923  TTTTTTTTCCTTTAGATCAACAAAATTCTGGTTGCCCTCAGGCCTCCTTCCTTTTCTTTCCATCTATTTTGTTG  3996

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3997  TTGTTTTACTTCATTTAGTTTTCTTTTTCTTTCTCTTGACTCCTCCTTTTAGGATGTCCAGATGTTGTAAAAAA  4070

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 4071  ACAAAAACAAAAAACCCAACAGCTGCAGTTCAATACAACTGCTCTTTTCACACGACTCCCTAAACTCCTTGTAA  4144

Query 1453  --------------------------------------------------------------------  1452
                                                                                
Sbjct 4145  CCTTCTGTAACTATTGGATGACGCTTTCTCCAGCTTAGCCCTAAATAAAGCACAGTTTAAAAAAAAAA  4212

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