Nucleotide Global Alignment

Description

Query:
TRCN0000475751
Subject:
XR_001782329.1
Aligned Length:
4209
Identities:
1358
Gaps:
2787

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TGGCAGGGAACTTGAACCGGTCCAGCCTGTTTAAACCGAAAGGACAGAGATCCTGTCTGTTCAATGTAAAAAAA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AAAAAAAGAAGAAGAAGAAAAAAATCACATCAGACCGAGAGAGAGAGAGAGAGAGAGAGGGAGAGAGAGAGAGA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GAGAGAGAGAGAGAGAGAGAGAGAGAGAAGGAAGAAGAAGAGGGAGAGAGAGAGAGAGAGAGAGAAGAGAGAAG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AGAGAGAGAAGAGAGAGAGAAGAGAGAAATAGAACGAGAGCCCAGAGCAGAGCAAGGTGTAGGAAACCAAAGGG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GAGAGAACCCGAGTGTGTGCGTGTGTGTATGAGTGTGTGTGAGTGTGTGTGTGTGTGTGCGCGCGTGTGTGAGT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GTGTGTGTGTGAGTGTGTGTGTGTGTGTGTGTGAGAGTGTGTGTGCGTGTGTGTGTGTGTGTGAGTGTGTGTGT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GTGCGTGTGCGTGTGTGAGCGCGAGCGAGCGAGTGAGGGAGAGGAGCGAGAGAGTGCGAGCGAGAAAGAATAAA  518

Query    1  -----------------ATGTATATAAAGATGGCCACGTTAGCAAACGGACAGGCTGACAACGCAAGCCTCAGT  57
                             |||||||||||||||||||||||||||||||||||||||||||||||.|||||||||
Sbjct  519  AGGAAAGATTTTTCTCTATGTATATAAAGATGGCCACGTTAGCAAACGGACAGGCTGACAACGCGAGCCTCAGT  592

Query   58  ACCAACGGGCTCGGCAGCAGCCCGGGCAGTGCCGGGCACATGAACGGATTAAGCCACAGCCCGGGGAACCCGTC  131
            |||||||||||.|||||||||||||||||.||||||||.|||||||||||||||||||||||||||||||||||
Sbjct  593  ACCAACGGGCTAGGCAGCAGCCCGGGCAGCGCCGGGCATATGAACGGATTAAGCCACAGCCCGGGGAACCCGTC  666

Query  132  GACCATTCCCATGAAGGACCATGATGCCATCAAGCTGTTCATTGGGCAGATCCCCCGCAACCTGGATGAGAAGG  205
            |||||||||||||||||||||.|||||||||||||||||||||||||||||||||||.||||||||||||||||
Sbjct  667  GACCATTCCCATGAAGGACCACGATGCCATCAAGCTGTTCATTGGGCAGATCCCCCGAAACCTGGATGAGAAGG  740

Query  206  ACCTCAAGCCCCTCTTCGAGGAGTTTGGCAAAATCTACGAGCTTACGGTTCTGAAGGACAGGTTCACAGGCATG  279
            |||||||||||||||||||||||||.|||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  ACCTCAAGCCCCTCTTCGAGGAGTTCGGCAAGATCTACGAGCTTACGGTTCTGAAGGACAGGTTCACAGGCATG  814

Query  280  CACAAAGGCTGCGCCTTCCTCACCTACTGCGAGCGTGAGTCAGCGCTGAAGGCCCAGAGCGCGCTGCACGAGCA  353
            ||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  CACAAAGGCTGCGCTTTCCTCACCTACTGCGAGCGTGAGTCAGCGCTGAAGGCCCAGAGCGCGCTGCACGAGCA  888

Query  354  GAAGACTCTGCCCGGGATGAACCGGCCGATCCAGGTGAAGCCTGCGGACAGCGAGAGCCGAGGAGGTAGTAGCT  427
            ||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         
Sbjct  889  GAAGACCCTGCCCGGGATGAACCGGCCGATCCAGGTGAAGCCTGCGGACAGCGAGAGCCGAGGAG---------  953

Query  428  GCCTGCGCCAGCCCCCTTCACATAGAAAACTCTTCGTGGGCATGCTCAACAAGCAACAGTCCGAGGACGACGTG  501
                                 |||||||||||||||||||.|||||||||||||||||.||.||||||||||||
Sbjct  954  ---------------------ATAGAAAACTCTTCGTGGGTATGCTCAACAAGCAACAATCTGAGGACGACGTG  1006

Query  502  CGCCGCCTTTTCGAGGCCTTTGGGAACATCGAGGAGTGCACCATCCTGCGCGGGCCCGACGGCAACAGCAAGGG  575
            ||||||||.|||||||||||.||||||||||||||||||||.||||||||||||||.|||||||||||||||||
Sbjct 1007  CGCCGCCTCTTCGAGGCCTTCGGGAACATCGAGGAGTGCACTATCCTGCGCGGGCCGGACGGCAACAGCAAGGG  1080

Query  576  GTGCGCCTTTGTGAAGTACTCCTCCCACGCCGAGGCGCAGGCCGCCATCAACGCGCTACACGGCAGCCAGACCA  649
            |||||||||||||||||||||||||||.||||||||.||.||||||||||||||.|||||.|||||||||||||
Sbjct 1081  GTGCGCCTTTGTGAAGTACTCCTCCCATGCCGAGGCACAAGCCGCCATCAACGCTCTACATGGCAGCCAGACCA  1154

Query  650  TGCCGGGAGCCTCGTCCAGTCTGGTGGTCAAGTTCGCCGACACCGACAAGGAGCGCACGATGCGGCGAATGCAG  723
            ||||.||||||||.|||||.||||||||||||||.||.|||||.||||||||||||||.|||||.||.||||||
Sbjct 1155  TGCCTGGAGCCTCCTCCAGCCTGGTGGTCAAGTTTGCAGACACTGACAAGGAGCGCACAATGCGACGGATGCAG  1228

Query  724  CAGATGGCTGGCCAGATGGGCATGTTCAACCCCATGGCCATCCCTTTCGGGGCCTACGGCGCCTACGCTCAGGC  797
            ||||||||||||||||||||||||||||||||||||||||||||.|||||.|||||.||||||||.||||||||
Sbjct 1229  CAGATGGCTGGCCAGATGGGCATGTTCAACCCCATGGCCATCCCCTTCGGAGCCTATGGCGCCTATGCTCAGGC  1302

Query  798  ACTGATGCAGCAGCAAGCGGCCCTGATGGCATCAGTCGCGCAGGGCGGCTACCTGAACCCCATGGCTGCCTTCG  871
            ||||||||||||||||||.|||||.||||||||.||||||||.||.|||||||||||.||||||||||||||||
Sbjct 1303  ACTGATGCAGCAGCAAGCAGCCCTCATGGCATCGGTCGCGCAAGGAGGCTACCTGAATCCCATGGCTGCCTTCG  1376

Query  872  CTGCCGCCCAGATGCAGCAGATGGCGGCCCTCAACATGAATGGCCTGGCGGCCGCACCTATGACCCCAACCTCA  945
            ||||||||||.||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||
Sbjct 1377  CTGCCGCCCAAATGCAGCAGATGGCGGCCCTCAACATGAATGGCCTGGCAGCCGCACCTATGACCCCAACCTCA  1450

Query  946  GGTGGCAGCACCCCTCCGGGCATCACTGCACCAGCCGTGCCTAGCATCCCATCCCCCATTGGGGTGAATGGCTT  1019
            |||||||||||||||||.|||||||||||||||||.||||||||||||||||||||||||||||||||.|||||
Sbjct 1451  GGTGGCAGCACCCCTCCAGGCATCACTGCACCAGCTGTGCCTAGCATCCCATCCCCCATTGGGGTGAACGGCTT  1524

Query 1020  CACCGGCCTCCCCCCACAGGCCAATGGGCAACCTGCTGCGGAAGCTGTGTTCGCCAATGGCATCCACCCCTACC  1093
            |||.|||||||||||.||||||||||||||.||||||||||||||||||||.|||||||||||.||||||||||
Sbjct 1525  CACGGGCCTCCCCCCTCAGGCCAATGGGCAGCCTGCTGCGGAAGCTGTGTTTGCCAATGGCATTCACCCCTACC  1598

Query 1094  CAGCACAGAGCCCCACCGCCGCGGACCCCCTGCAGCAGGCCTACGCCGGAGTGCAGCAGTATGCAGCAGCTGCC  1167
            |||||||||||||||||||.||.|||||||||||||||||||||||.|||||||||||||||||||.|.|||||
Sbjct 1599  CAGCACAGAGCCCCACCGCAGCCGACCCCCTGCAGCAGGCCTACGCTGGAGTGCAGCAGTATGCAGGACCTGCC  1672

Query 1168  TACCCTGCTGCCTATGGTCAGATAAGCCAGGCCTTTCCTCAGCCGCCTCCAATGATCCCCCAGCAGCAGAGAGA  1241
            |||||||||||||||||||||||.||||||||||||||||||||.||.||||||||.||||||||.||||||||
Sbjct 1673  TACCCTGCTGCCTATGGTCAGATTAGCCAGGCCTTTCCTCAGCCACCGCCAATGATTCCCCAGCAACAGAGAGA  1746

Query 1242  AGGGCCCGAGGGCTGTAACCTGTTCATCTACCATCTGCCCCAGGAGTTTGGGGACGCTGAGCTGATGCAGATGT  1315
            ||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1747  AGGGCCCGAGGGCTGTAACCTGCTCATCTACCATCTGCCCCAGGAGTTTGGGGACGCTGAGCTGATGCAGATGT  1820

Query 1316  TCCTCCCTTTCGGCTTCGTGAGCTTCGACAACCCGGCCAGCGCGCAGACCGCCATCCAGGCCATGAACGGCTTC  1389
            |||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||
Sbjct 1821  TCCTCCCTTTCGGCTTCGTGAGCTTCGACAACCCGGCCAGCGCACAGACCGCCATCCAGGCCATGAACGGCTTC  1894

Query 1390  CAGATCGGCATGAAGAGGCTCAAGGTGCAGCTGAAGCGGCCCAAAGACGCCAATCGCCCGTAC-----------  1452
            |||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||           
Sbjct 1895  CAGATAGGCATGAAGAGGCTCAAGGTGCAGCTGAAGCGGCCCAAAGACGCCAATCGCCCGTACTGAGCGCCGGC  1968

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 1969  GGGAGCGTCCCCCGGGGGAGACCAGGACTCGCACAGGGCCAGTCAAATCCACCACAGTCTCGCGCTGAGCTAGG  2042

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2043  AATAAAGTTCACGTAATCACATGAGAGTGGAGAAAAGTCCCCCATCCGGCAGGATGCTGAACGGGCTACATTAA  2116

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2117  AAACAAACCTCTTTCTCTCTCTATTTATAAATGAGAACTGTTGGACGACACCTTTGACATATCAGCCAATACCA  2190

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2191  ATCAAGCTGACGACTCCAGACACTCCGTGTGACTGTAACATTTCTTCAAGGAAAGTATAGCGTCTATGGAGTGC  2264

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2265  AGAGGGCATGTGTTTGGGGAAAAATATACATGACATAAAGATGACGACGAAGAAGAAAAATGATATAAAACAAA  2338

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2339  CAAAAAACCCGCGACTTTAAAATGAAATAACGTGAGCCCAGATGGGGAAGCTGAAGGGCTGGGCACTAGGAGGA  2412

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2413  GATGCTGCTGCCAACCGATCCTGGGGCTTTTCCCGCCCGTAGGCGCCTGAGGCAGGCAGGGGCAAGTGTACAAT  2486

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2487  GGGGCCTAGTCCCCAGCAGGCGGCTGGGAGGCCGCCACTGAGCATCTCTATTTGTCATTCCTTTAGCTATTTAG  2560

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2561  GGACCAAAGGACCAAACTTTTTATTGCAGATGTGTAGCTCTGTCAATTAGAGGTGGAATGGAGACCAACCTCCT  2634

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2635  TCCTGCCTCCTGGCTGTTCTTGAAACAGCTTAGAGCGATTCTATGAAAATGTAATAAAAAATAAAAATAAAAAA  2708

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2709  AAAATAAAAAAAGAACAAAAAAAACAAGGAAAAAAAATAATGCTTCAACGCTTTTAAAACAGCAAGATACTAGT  2782

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2783  TCTTTGATACTTTGAGAGGCGCTTTGATTACCCCGATTGAAGTCTCTGAAACTTTCCTATGGTTTTCTGTATTA  2856

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2857  TATGTCTGGATGGAGCTGTTTAGATACATTGATTGGTGGATATTTGGAGAAAGCAACAAAGATATTAAGTCATT  2930

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2931  AACCATGAAGAGAACACGAGGGGAACCAGGGGACTTCGAAGGCAAGGTAATTGTTGTGAAAAGTCTGTAAATGC  3004

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3005  TTCTAATTCTTCCCCCCTCTTAAAATCATAATAGTTGTACAGAATTTTAAAAGGAAAAGTTTAAAATACCTATA  3078

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3079  TCATAGAAGAAAAAAAAATTAGAGGAAAGCAAAAAAATAAAAAAAAAAAGGAAAAAAAAACCTTATAGAAGTTA  3152

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3153  GCATTATGCTAAAATCCCAGATGTTGTAGGACTGTACTTCTGTAGAGTTTAGACTGAGCATCGATCCCGTCTCC  3226

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3227  CCGCGAGTGCTGTCGGACTCCGTCCCCAAGGGCCAGGCCGGACTGTCCAGACCTGCAGGCTCCGGCCAGAAGCG  3300

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3301  CCGCTCCGGAAGCGTCCTGCCGCCTCTCGCTTTGCCAGCCTGGGAGCCGCGCGCATGCGCGCTCTCTCTGCCCT  3374

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3375  TCTCACCTCTGCTTCACTCGCCTTCTGTGCTTGTTCCGGAGACTTTCCAGGCCAGGGAGAACTGGGAACTTCTC  3448

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3449  ATCTTCAAACAACTAGACAACACACACACACACAAAACCTTAAACAAGAGAGAGAAAACAAACAATCTTTGAAG  3522

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3523  AATTTCTGAAACTGTTTACAAGGAATTTTGAAAAACAGGGATGTTTAAATGATGCTGGCTCTGTTTTTCTGTAA  3596

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3597  ATAAATTTGCATATTTTGTAGGACTTTTAATTGTAATGATAGAGAAAAAACAAGGAAAACTATTTAATGAAAGC  3670

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3671  ACGATATTTATCTTTGGTAAATGACTTTAGAGCAGTTAAAGACATTGCTTAAAAACTCAGAATCAGAAAAACAC  3744

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3745  TGAATTATTTAAGAACACATATATTTTAAAGTATAACATATTTATTATAATTTATTTGCACCTTGGGAAGACTT  3818

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3819  GCTTTGCATTCTGCCTCAAGAGCTTCTCATTGATGTCCATCTGGAGGCCAGGGGGGTCTTGGAACTACCATTTT  3892

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3893  TTTTTCCTTTAGATCAACAAAATTCTGGTTGCCCTCAGGCCTCCTTCCTTTTCTTTCCATCTATTTTGTTGTTG  3966

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3967  TTTTACTTCATTTAGTTTTCTTTTTCTTTCTCTTGACTCCTCCTTTTAGGATGTCCAGATGTTGTAAAAAAACA  4040

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 4041  AAAACAAAAAACCCAACAGCTGCAGTTCAATACAACTGCTCTTTTCACACGACTCCCTAAACTCCTTGTAACCT  4114

Query 1453  -----------------------------------------------------------------  1452
                                                                             
Sbjct 4115  TCTGTAACTATTGGATGACGCTTTCTCCAGCTTAGCCCTAAATAAAGCACAGTTTAAAAAAAAAA  4179

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