Nucleotide Global Alignment

Description

Query:
TRCN0000475751
Subject:
XR_001782330.1
Aligned Length:
4215
Identities:
1307
Gaps:
2847

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TGGCAGGGAACTTGAACCGGTCCAGCCTGTTTAAACCGAAAGGACAGAGATCCTGTCTGTTCAATGTAAAAAAA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AAAAAAAGAAGAAGAAGAAAAAAATCACATCAGACCGAGAGAGAGAGAGAGAGAGAGAGGGAGAGAGAGAGAGA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GAGAGAGAGAGAGAGAGAGAGAGAGAGAAGGAAGAAGAAGAGGGAGAGAGAGAGAGAGAGAGAGAAGAGAGAAG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AGAGAGAGAAGAGAGAGAGAAGAGAGAAATAGAACGAGAGCCCAGAGCAGAGCAAGGTGTAGGAAACCAAAGGG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GAGAGAACCCGAGTGTGTGCGTGTGTGTATGAGTGTGTGTGAGTGTGTGTGTGTGTGTGCGCGCGTGTGTGAGT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GTGTGTGTGTGAGTGTGTGTGTGTGTGTGTGTGAGAGTGTGTGTGCGTGTGTGTGTGTGTGTGAGTGTGTGTGT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GTGCGTGTGCGTGTGTGAGCGCGAGCGAGCGAGTGAGGGAGAGGAGCGAGAGAGTGCGAGCGAGAAAGAATAAA  518

Query    1  -----------------ATGTATATAAAGATGGCCACGTTAGCAAACGGACAGGCTGACAACGCAAGCCTCAGT  57
                             |||||||||||||||||||||||||||||||||||||||||||||||.|||||||||
Sbjct  519  AGGAAAGATTTTTCTCTATGTATATAAAGATGGCCACGTTAGCAAACGGACAGGCTGACAACGCGAGCCTCAGT  592

Query   58  ACCAACGGGCTCGGCAGCAGCCCGGGCAGTGCCGGGCACATGAACGGATTAAGCCACAGCCCGGGGAACCCGTC  131
            |||||||||||.|||||||||||||||||.||||||||.|||||||||||||||||||||||||||||||||||
Sbjct  593  ACCAACGGGCTAGGCAGCAGCCCGGGCAGCGCCGGGCATATGAACGGATTAAGCCACAGCCCGGGGAACCCGTC  666

Query  132  GACCATTCCCATGAAGGACCATGATGCCATCAAGCTGTTCATTGGGCAGATCCCCCGCAACCTGGATGAGAAGG  205
            |||||||||||||||||||||.|||||||||||||||||||||||||||||||||||.||||||||||||||||
Sbjct  667  GACCATTCCCATGAAGGACCACGATGCCATCAAGCTGTTCATTGGGCAGATCCCCCGAAACCTGGATGAGAAGG  740

Query  206  ACCTCAAGCCCCTCTTCGAGGAGTTTGGCAAAATCTACGAGCTTACGGTTCTGAAGGACAGGTTCACAGGCATG  279
            |||||||||||||||||||||||||.|||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  ACCTCAAGCCCCTCTTCGAGGAGTTCGGCAAGATCTACGAGCTTACGGTTCTGAAGGACAGGTTCACAGGCATG  814

Query  280  CACAAAGGCTGCGCCTTCCTCACCTACTGCGAGCGTGAGTCAGCGCTGAAGGCCCAGAGCGCGCTGCACGAGCA  353
            ||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  CACAAAGGCTGCGCTTTCCTCACCTACTGCGAGCGTGAGTCAGCGCTGAAGGCCCAGAGCGCGCTGCACGAGCA  888

Query  354  GAAGACTCTGCCCGGGATGAACCGGCCGATCCAGGTGAAGCCTGCGGACAGCGAGAGCCGAGGAGGTAGTAGCT  427
            ||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GAAGACCCTGCCCGGGATGAACCGGCCGATCCAGGTGAAGCCTGCGGACAGCGAGAGCCGAGGAGGTAGTAGCT  962

Query  428  GCCTGCGCCAGCCCCCTTCAC---ATAGAAAACTCTTCGTGGGCATGCTCAACAAGCAACAGTCCGAGGACGAC  498
            |||||||||||||||||||||   |||||||||||||||||||.|||||||||||||||||.||.|||||||||
Sbjct  963  GCCTGCGCCAGCCCCCTTCACAAGATAGAAAACTCTTCGTGGGTATGCTCAACAAGCAACAATCTGAGGACGAC  1036

Query  499  GTGCGCCGCCTTTTCGAGGCCTTTGGGAACATCGAGGAGTGCACCATCCTGCGCGGGCCCGACGGCAACAGCAA  572
            |||||||||||.|||||||||||.||||||||||||||||||||.||||||||||||||.||||||||||||||
Sbjct 1037  GTGCGCCGCCTCTTCGAGGCCTTCGGGAACATCGAGGAGTGCACTATCCTGCGCGGGCCGGACGGCAACAGCAA  1110

Query  573  GGGGTGCGCCTTTGTGAAGTACTCCTCCCACGCCGAGGCGCAGGCCGCCATCAACGCGCTACACGGCAGCCAGA  646
            ||||||||||||||||||||||||||||||.||||||||.||.||||||||||||||.|||||.||||||||||
Sbjct 1111  GGGGTGCGCCTTTGTGAAGTACTCCTCCCATGCCGAGGCACAAGCCGCCATCAACGCTCTACATGGCAGCCAGA  1184

Query  647  CCATGCCGGGAGCCTCGTCCAGTCTGGTGGTCAAGTTCGCCGACACCGACAAGGAGCGCACGATGCGGCGAATG  720
            |||||||.||||||||.|||||.||||||||||||||.||.|||||.||||||||||||||.|||||.||.|||
Sbjct 1185  CCATGCCTGGAGCCTCCTCCAGCCTGGTGGTCAAGTTTGCAGACACTGACAAGGAGCGCACAATGCGACGGATG  1258

Query  721  CAGCAGATGGCTGGCCAGATGGGCATGTTCAACCCCATGGCCATCCCTTTCGGGGCCTACGGCGCCTACGCTCA  794
            |||||||||||||||||||||||||||||||||||||||||||||||.|||||.|||||.||||||||.|||||
Sbjct 1259  CAGCAGATGGCTGGCCAGATGGGCATGTTCAACCCCATGGCCATCCCCTTCGGAGCCTATGGCGCCTATGCTCA  1332

Query  795  GGCACTGATGCAGCAGCAAGCGGCCCTGATGGCATCAGTCGCGCAGGGCGGCTACCTGAACCCCATGGCTGCCT  868
            |||||||||||||||||||||.|||||.||||||||.||||||||.||.|||||||||||.|||||||||||||
Sbjct 1333  GGCACTGATGCAGCAGCAAGCAGCCCTCATGGCATCGGTCGCGCAAGGAGGCTACCTGAATCCCATGGCTGCCT  1406

Query  869  TCGCTGCCGCCCAGATGCAGCAGATGGCGGCCCTCAACATGAATGGCCTGGCGGCCGCACCTATGACCCCAACC  942
            |||||||||||||.||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||
Sbjct 1407  TCGCTGCCGCCCAAATGCAGCAGATGGCGGCCCTCAACATGAATGGCCTGGCAGCCGCACCTATGACCCCAACC  1480

Query  943  TCAGGTGGCAGCACCCCTCCGGGCATCACTGCACCAGCCGTGCCTAGCATCCCATCCCCCATTGGGGTGAATGG  1016
            ||||||||||||||||||||.|||||||||||||||||.||||||||||||||||||||||||||||||||.||
Sbjct 1481  TCAGGTGGCAGCACCCCTCCAGGCATCACTGCACCAGCTGTGCCTAGCATCCCATCCCCCATTGGGGTGAACGG  1554

Query 1017  CTTCACCGGCCTCCCCCCACAGGCCAATGGGCAACCTGCTGCGGAAGCTGTGTTCGCCAATGGCATCCACCCCT  1090
            ||||||.|||||||||||.||||||||||||||.||||||||||||||||||||.|||||||||||.|||||||
Sbjct 1555  CTTCACGGGCCTCCCCCCTCAGGCCAATGGGCAGCCTGCTGCGGAAGCTGTGTTTGCCAATGGCATTCACCCCT  1628

Query 1091  ACCCAGCACAGAGCCCCACCGCCGCGGACCCCCTGCAGCAGGCCTACGCCGGAGTGCAGCAGTATGCAG---CA  1161
            ||||||||||||||||||||||.||.|||||||||||||||||||||||.|||||||||||||||||||   ||
Sbjct 1629  ACCCAGCACAGAGCCCCACCGCAGCCGACCCCCTGCAGCAGGCCTACGCTGGAGTGCAGCAGTATGCAGGACCA  1702

Query 1162  GCTGCCTACCCTGCTGCCTATGGTCAGATAAGCCAGGCCTTTCCTCAGCCGCCTCCAATGATCCCCCAGCAGCA  1235
            |||||||||||||||||||||||||||||.||||||||||||||||||||.||.||||||||.||||||||.||
Sbjct 1703  GCTGCCTACCCTGCTGCCTATGGTCAGATTAGCCAGGCCTTTCCTCAGCCACCGCCAATGATTCCCCAGCAACA  1776

Query 1236  GAGAGAAGGGCCCGAGGGCTGTAACCTGTTCATCTACCATCTGCCCCAGGAGTTTGGGGACGCTGAGCTGATGC  1309
            |||||||                                                                   
Sbjct 1777  GAGAGAA-------------------------------------------------------------------  1783

Query 1310  AGATGTTCCTCCCTTTCGGCTTCGTGAGCTTCGACAACCCGGCCAGCGCGCAGACCGCCATCCAGGCCATGAAC  1383
                             ||||||||||||||||||||||||||||||||.||||||||||||||||||||||||
Sbjct 1784  -----------------GGCTTCGTGAGCTTCGACAACCCGGCCAGCGCACAGACCGCCATCCAGGCCATGAAC  1840

Query 1384  GGCTTCCAGATCGGCATGAAGAGGCTCAAGGTGCAGCTGAAGCGGCCCAAAGACGCCAATCGCCCGTAC-----  1452
            |||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
Sbjct 1841  GGCTTCCAGATAGGCATGAAGAGGCTCAAGGTGCAGCTGAAGCGGCCCAAAGACGCCAATCGCCCGTACTGAGC  1914

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 1915  GCCGGCGGGAGCGTCCCCCGGGGGAGACCAGGACTCGCACAGGGCCAGTCAAATCCACCACAGTCTCGCGCTGA  1988

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 1989  GCTAGGAATAAAGTTCACGTAATCACATGAGAGTGGAGAAAAGTCCCCCATCCGGCAGGATGCTGAACGGGCTA  2062

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2063  CATTAAAAACAAACCTCTTTCTCTCTCTATTTATAAATGAGAACTGTTGGACGACACCTTTGACATATCAGCCA  2136

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2137  ATACCAATCAAGCTGACGACTCCAGACACTCCGTGTGACTGTAACATTTCTTCAAGGAAAGTATAGCGTCTATG  2210

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2211  GAGTGCAGAGGGCATGTGTTTGGGGAAAAATATACATGACATAAAGATGACGACGAAGAAGAAAAATGATATAA  2284

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2285  AACAAACAAAAAACCCGCGACTTTAAAATGAAATAACGTGAGCCCAGATGGGGAAGCTGAAGGGCTGGGCACTA  2358

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2359  GGAGGAGATGCTGCTGCCAACCGATCCTGGGGCTTTTCCCGCCCGTAGGCGCCTGAGGCAGGCAGGGGCAAGTG  2432

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2433  TACAATGGGGCCTAGTCCCCAGCAGGCGGCTGGGAGGCCGCCACTGAGCATCTCTATTTGTCATTCCTTTAGCT  2506

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2507  ATTTAGGGACCAAAGGACCAAACTTTTTATTGCAGATGTGTAGCTCTGTCAATTAGAGGTGGAATGGAGACCAA  2580

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2581  CCTCCTTCCTGCCTCCTGGCTGTTCTTGAAACAGCTTAGAGCGATTCTATGAAAATGTAATAAAAAATAAAAAT  2654

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2655  AAAAAAAAAATAAAAAAAGAACAAAAAAAACAAGGAAAAAAAATAATGCTTCAACGCTTTTAAAACAGCAAGAT  2728

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2729  ACTAGTTCTTTGATACTTTGAGAGGCGCTTTGATTACCCCGATTGAAGTCTCTGAAACTTTCCTATGGTTTTCT  2802

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2803  GTATTATATGTCTGGATGGAGCTGTTTAGATACATTGATTGGTGGATATTTGGAGAAAGCAACAAAGATATTAA  2876

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2877  GTCATTAACCATGAAGAGAACACGAGGGGAACCAGGGGACTTCGAAGGCAAGGTAATTGTTGTGAAAAGTCTGT  2950

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 2951  AAATGCTTCTAATTCTTCCCCCCTCTTAAAATCATAATAGTTGTACAGAATTTTAAAAGGAAAAGTTTAAAATA  3024

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3025  CCTATATCATAGAAGAAAAAAAAATTAGAGGAAAGCAAAAAAATAAAAAAAAAAAGGAAAAAAAAACCTTATAG  3098

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3099  AAGTTAGCATTATGCTAAAATCCCAGATGTTGTAGGACTGTACTTCTGTAGAGTTTAGACTGAGCATCGATCCC  3172

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3173  GTCTCCCCGCGAGTGCTGTCGGACTCCGTCCCCAAGGGCCAGGCCGGACTGTCCAGACCTGCAGGCTCCGGCCA  3246

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3247  GAAGCGCCGCTCCGGAAGCGTCCTGCCGCCTCTCGCTTTGCCAGCCTGGGAGCCGCGCGCATGCGCGCTCTCTC  3320

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3321  TGCCCTTCTCACCTCTGCTTCACTCGCCTTCTGTGCTTGTTCCGGAGACTTTCCAGGCCAGGGAGAACTGGGAA  3394

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3395  CTTCTCATCTTCAAACAACTAGACAACACACACACACACAAAACCTTAAACAAGAGAGAGAAAACAAACAATCT  3468

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3469  TTGAAGAATTTCTGAAACTGTTTACAAGGAATTTTGAAAAACAGGGATGTTTAAATGATGCTGGCTCTGTTTTT  3542

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3543  CTGTAAATAAATTTGCATATTTTGTAGGACTTTTAATTGTAATGATAGAGAAAAAACAAGGAAAACTATTTAAT  3616

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3617  GAAAGCACGATATTTATCTTTGGTAAATGACTTTAGAGCAGTTAAAGACATTGCTTAAAAACTCAGAATCAGAA  3690

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3691  AAACACTGAATTATTTAAGAACACATATATTTTAAAGTATAACATATTTATTATAATTTATTTGCACCTTGGGA  3764

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3765  AGACTTGCTTTGCATTCTGCCTCAAGAGCTTCTCATTGATGTCCATCTGGAGGCCAGGGGGGTCTTGGAACTAC  3838

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3839  CATTTTTTTTTCCTTTAGATCAACAAAATTCTGGTTGCCCTCAGGCCTCCTTCCTTTTCTTTCCATCTATTTTG  3912

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3913  TTGTTGTTTTACTTCATTTAGTTTTCTTTTTCTTTCTCTTGACTCCTCCTTTTAGGATGTCCAGATGTTGTAAA  3986

Query 1453  --------------------------------------------------------------------------  1452
                                                                                      
Sbjct 3987  AAAACAAAAACAAAAAACCCAACAGCTGCAGTTCAATACAACTGCTCTTTTCACACGACTCCCTAAACTCCTTG  4060

Query 1453  -----------------------------------------------------------------------  1452
                                                                                   
Sbjct 4061  TAACCTTCTGTAACTATTGGATGACGCTTTCTCCAGCTTAGCCCTAAATAAAGCACAGTTTAAAAAAAAAA  4131

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