Nucleotide Global Alignment

Description

Query:
TRCN0000476324
Subject:
XR_001755190.1
Aligned Length:
3123
Identities:
813
Gaps:
2310

Alignment

Query    1  ------------------------------------------------------------------------AT  2
                                                                                    ||
Sbjct    1  AGGCGCTGTGAGAGGCGGTAGCGGCGGCGGCGGCGGTGGTATCGGCGGCAGCTGTGAGGGGGTTCCGGGAAGAT  74

Query    3  GGTGCTGATCAAGGAATTCCGTGTGGTTTTGCCATGTTCTGTTCAGGAGTATCAGGTTGGGCAGCTTTACTCTG  76
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GGTGCTGATCAAGGAATTCCGTGTGGTTTTGCCATGTTCTGTTCAGGAGTATCAGGTTGGGCAGCTTTACTCTG  148

Query   77  TTGCAGAAGCTAGTAAGAATGAGACTGGTGGTGGAGAAGGAATTGAAGTCTTAAAGAATGAACCTTATGAGAAG  150
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TTGCAGAAGCTAGTAAGAATGAGACTGGTGGTGGAGAAGGAATTGAAGTCTTAAAGAATGAACCTTATGAGAAG  222

Query  151  GATGGAGAAAAGGGACAGTATACGCACAAAATTTATCACCTAAAGAGCAAAGTGCCTGCATTCGTGAGGATGAT  224
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GATGGAGAAAAGGGACAGTATACGCACAAAATTTATCACCTAAAGAGCAAAGTGCCTGCATTCGTGAGGATGAT  296

Query  225  TGCTCCCGAGGGCTCCTTGGTGTTTCATGAGAAAGCCTGGAATGCGTACCCCTACTGTAGAACAATTGTAACGA  298
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TGCTCCCGAGGGCTCCTTGGTGTTTCATGAGAAAGCCTGGAATGCGTACCCCTACTGTAGAACAATTGTAACGA  370

Query  299  ATGAATATATGAAAGATGATTTCTTCATTAAAATCGAAACATGGCACAAACCAGACTTGGGAACATTAGAAAAT  372
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  ATGAATATATGAAAGATGATTTCTTCATTAAAATCGAAACATGGCACAAACCAGACTTGGGAACATTAGAAAAT  444

Query  373  GTACATGGTTTAGATCCAAACACATGGAAAACTGTTGAAATTGTCCATATAGATATTGCAGATAGAAGTCAAGT  446
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GTACATGGTTTAGATCCAAACACATGGAAAACTGTTGAAATTGTCCATATAGATATTGCAGATAGAAGTCAAGT  518

Query  447  TGAACCAGC-----------------------------------------------------------------  455
            |||||||||                                                                 
Sbjct  519  TGAACCAGCAGCGAAAATGGGCAGTGTTTACAGGCATGAATGCTGGTGGAAAGAGCAGAGTAAGGGCAGATTGC  592

Query  456  --------------------------------------------------------------------------  455
                                                                                      
Sbjct  593  ACAAGAACCGTGGAGGCCCTGGTTCCCATCACCTCCACCTCAGCACAGACTTCAGAGAGGAGAGGAGGCACTGG  666

Query  456  ---------------------------------------------------------------AGACTACAAAG  466
                                                                           |||||||||||
Sbjct  667  ATGCATGACAGCAGCACTTGAGATAGGTGCTCCAGGTGGAAGGCACTGCACATGCAAAGGCTGAGACTACAAAG  740

Query  467  CTGATGAAGACCCAGCATTATTCCAGTCAGTCAAGACCAAGAGAGGCCCTTTGGGACCCAACTGGAAGAAGGAG  540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CTGATGAAGACCCAGCATTATTCCAGTCAGTCAAGACCAAGAGAGGCCCTTTGGGACCCAACTGGAAGAAGGAG  814

Query  541  CTGGCAAACAGCCCTGACTGTCCCCAGATGTGTGCCTATAAGCTGGTGACCATCAAATTCAAGTGGTGGGGACT  614
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  CTGGCAAACAGCCCTGACTGTCCCCAGATGTGTGCCTATAAGCTGGTGACCATCAAATTCAAGTGGTGGGGACT  888

Query  615  GCAAAGCAAAGTAGAAAACTTCATTCAAAAGCAAGAAAAACGGATATTTACAAACTTCCATCGCCAGCTTTTTT  688
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GCAAAGCAAAGTAGAAAACTTCATTCAAAAGCAAGAAAAACGGATATTTACAAACTTCCATCGCCAGCTTTTTT  962

Query  689  GTTGGATTGACAAGTGGATCGATCTCACGATGGAAGACATTAGGAGAATGGAAGACGAGACTCAGAAAGAACTA  762
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  GTTGGATTGACAAGTGGATCGATCTCACGATGGAAGACATTAGGAGAATGGAAGACGAGACTCAGAAAGAACTA  1036

Query  763  GAAACAATGCGTAAGAGGGGTTCCGTTCGAGGCACGTCGGCTGCTGATGTC-----------------------  813
            |||||||||||||||||||||||||||||||||||||||||||||||||||                       
Sbjct 1037  GAAACAATGCGTAAGAGGGGTTCCGTTCGAGGCACGTCGGCTGCTGATGTCTAGATGAGTCCCCTGTAGGGTCA  1110

Query  814  --------------------------------------------------------------------------  813
                                                                                      
Sbjct 1111  GAGACAATGTCAAACTGTTTACGTAATCAAGGTCAAGTGAGGGGAACAAGCGCAGCCAGTGATGAGTGAAGAAG  1184

Query  814  --------------------------------------------------------------------------  813
                                                                                      
Sbjct 1185  AATCTGACCAGTATCTTGCAGTGTTGACGTTTCCCAGATGTGTGCTTGTGATGATACACACACATGCACAGGTT  1258

Query  814  --------------------------------------------------------------------------  813
                                                                                      
Sbjct 1259  CTCAACCACGTGTGTATATATGTATGTGTGCATATGTCTGTAGCTGTATATAAAGCGCATGTAGAGCTACAGAT  1332

Query  814  --------------------------------------------------------------------------  813
                                                                                      
Sbjct 1333  CCAGATACACACACTTGTGTATATATGTACATACAGACATACTGAAGGGATTAGTACAATTTCTCCAAAGTACT  1406

Query  814  --------------------------------------------------------------------------  813
                                                                                      
Sbjct 1407  GTACCTATCTTCAGCAAGAATGCAAAAGAAAATATTTTCAATATATATACCTGGAACAGATTTTAATAATTATC  1480

Query  814  --------------------------------------------------------------------------  813
                                                                                      
Sbjct 1481  AGAGTAATACCATTAATGGACAAATTGACTGCAATGTAATACTAGCTGGTATGTTTCATAAATGTCAAGCTGTG  1554

Query  814  --------------------------------------------------------------------------  813
                                                                                      
Sbjct 1555  GACCAACATATATAGCCTTTTATTATTTTTCTCTTCTTTTAAGTCAGTCTGTTATAAATTTTTTTTTAGTCCCA  1628

Query  814  --------------------------------------------------------------------------  813
                                                                                      
Sbjct 1629  TAAGCAGTAGACTCCCACAGAAAATTTCTTCAAAATTTTTTGGTGTTCCAATGAATCTGGGATGTAAACTCTGA  1702

Query  814  --------------------------------------------------------------------------  813
                                                                                      
Sbjct 1703  ATGTATTTATAACTATTTATTTCTGGATGGTCATTATCTTGTAGCCAAATTTGACAATATAAAGTAAGGAGCAA  1776

Query  814  --------------------------------------------------------------------------  813
                                                                                      
Sbjct 1777  AGTTACAGGCCAGTTTTTACTTGTTTGCCCTGAGGGAAAAATCCTTTTAAAAAAAATTTCTGGTTTTTATTGGA  1850

Query  814  --------------------------------------------------------------------------  813
                                                                                      
Sbjct 1851  TTTTTGTATTTTAAATTTCAAATATTTTTCTACATCAAACCTAGCAAAAATGGAGATGACGGTTTCTGATTTAT  1924

Query  814  --------------------------------------------------------------------------  813
                                                                                      
Sbjct 1925  AATAAATACTAGACAGTTTTCAGGCTCCTGTTAGACAAACACATTGATGAAGAAATTAGTCTTAATAGGATTGT  1998

Query  814  --------------------------------------------------------------------------  813
                                                                                      
Sbjct 1999  AGGCTGTGTAGAAAAGTTGGAAATATAGCACTTCATGGAGTCTTGTTTTGAAGATGACAGTTTTCTGTAACTAC  2072

Query  814  --------------------------------------------------------------------------  813
                                                                                      
Sbjct 2073  AGCTTGGAAACTATGCAAATGGTCTAGATTCCTCAGAGCTCACATGATAGGATATAGTTAGTGATGACATTTTG  2146

Query  814  --------------------------------------------------------------------------  813
                                                                                      
Sbjct 2147  CTCTTCTTGTGGGAACACACACTTCAAGGAGGAGATAGTGACTTTGAGATAGGAACAGTTTAAGATGCAGTGTG  2220

Query  814  --------------------------------------------------------------------------  813
                                                                                      
Sbjct 2221  AGTCTGGCCTGCGTGCGGTGAGGAGGCCCCGCCAAGAGACTGGTGGACATCTGACTGTGGGATGTGCTCTCAAG  2294

Query  814  --------------------------------------------------------------------------  813
                                                                                      
Sbjct 2295  TAGGACGTCATCAGGACAGATTCTGAATAGGCATCATGAGAGTGCTGGTCAGAAACGGCTGCCACTTTTTTTAA  2368

Query  814  --------------------------------------------------------------------------  813
                                                                                      
Sbjct 2369  TTTAATTTTATTTTTTATTTAAAGGAAGGAACAATAGCTAGGTAAGATTTTTATCAGCTTTCTCTGTCTGAATC  2442

Query  814  --------------------------------------------------------------------------  813
                                                                                      
Sbjct 2443  CAGTTTTTCCTCTGTCAGTCCTGGAAGCTTGAATAGAATTATATTGTTGAAGCCTTCAGGTCACAAACTGTCTT  2516

Query  814  --------------------------------------------------------------------------  813
                                                                                      
Sbjct 2517  TTGTAACCTCCTGTCCCTCCTAAAACACGCCAACCCCTGCAGTCAAATCACATTAGTAATCTGATTTGCTGACA  2590

Query  814  --------------------------------------------------------------------------  813
                                                                                      
Sbjct 2591  GTCCTGCCCTGCCTGCTCCTCGTTTTCCCACATGTCCTGCATCCCTCCCCCACTGGAGTGATTTCAGTGAATCA  2664

Query  814  --------------------------------------------------------------------------  813
                                                                                      
Sbjct 2665  GACAAGGAAGGATGTGTAGGATCACTACTGCATTGCAATACCCTGTTATCCTCAGCAACAAAACCCACATTTCA  2738

Query  814  --------------------------------------------------------------------------  813
                                                                                      
Sbjct 2739  TACATCCTTTGTGTACTCAGGATAAAGACTGATGTTTACTCTCTGGGCACTGTTGTAAGATAGGTTTTGTCAGA  2812

Query  814  --------------------------------------------------------------------------  813
                                                                                      
Sbjct 2813  GCATAATCATTGTCTGCAAAGTGTTTGGTGCGAGGAAGATTATTGCTAATTTTGTGAAATAAAGAGTCTAGCCC  2886

Query  814  --------------------------------------------------------------------------  813
                                                                                      
Sbjct 2887  TCTCCTTTTAATGAACTTAACTCTCGCTGGCATCTGTAGTATCATTGGGAGCTTAGGCGCACATGGAAATGAGA  2960

Query  814  --------------------------------------------------------------------------  813
                                                                                      
Sbjct 2961  GCCCGGCGCATGGATTTTAATGTTTTTCTAACAACTGTGGAGATTTGAGGGAATGTGTGGTGAATGTAAAATAC  3034

Query  814  --------------------------------------------------------------------------  813
                                                                                      
Sbjct 3035  CTAGTTTACTTGCCAGTCTCTTGTGTAAATTACAGTAAAACAAAGTAAATGAAATTTAAACAAAAAATAAATTT  3108

Query  814  ---------------  813
                           
Sbjct 3109  GATCACAAAATGCCA  3123

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