Nucleotide Global Alignment

Description

Query:
TRCN0000476467
Subject:
NR_135905.2
Aligned Length:
3656
Identities:
1174
Gaps:
2482

Alignment

Query    1  ----------------------------------------------------ATGGGCTGGATCACAGAAGATC  22
                                                                ||||||||||||||||||||||
Sbjct    1  GTCATTCGAGGTCCGGGTCCGGCTTGCGGGGTCAGCGAACTGGAGAGGCGCCATGGGCTGGATCACAGAAGATC  74

Query   23  TTATTAGACGGAATGCTGAACACAACGACTGTGTCATTTTTTCCCTGGAGGAACTCTCGTTGCATCAGCAAGAA  96
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  TTATTAGACGGAATGCTGAACACAACGACTGTGTCATTTTTTCCCTGGAGGAACTCTCGTTGCATCAGCAAGAA  148

Query   97  ATAGAAAGACTAGAACACATTGATAAATGGTGCCGGGATTTAAAAATTCTCTATCTTCAAAATAATCTTATTGG  170
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  ATAGAAAGACTAGAACACATTGATAAATGGTGCCGGGATTTAAAAATTCTCTATCTTCAAAATAATCTTATTGG  222

Query  171  GAAAATTGAAAATGTTAGCAAACTCAAGAAACTTGAATATTTGAATTTAGCTTTAAACAACATTGAAAAAATAG  244
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GAAAATTGAAAATGTTAGCAAACTCAAGAAACTTGAATATTTGAATTTAGCTTTAAACAACATTGAAAAAATAG  296

Query  245  AAAACTTGGA----------------------------------------------------------------  254
            ||||||||||                                                                
Sbjct  297  AAAACTTGGAAGATGTCATCTATTGACTTCCTGATGTGGACGATGCAGATTTTGTTCTCTCACACCATCTGCAA  370

Query  255  --------------------------------------------------------------------------  254
                                                                                      
Sbjct  371  GGTTCTCAATTTTCTCCTACCCACCCTCCGTGTATTTTCATATGACATTGACAGGATATCATAATGAAATATGG  444

Query  255  --------------------------------------------------------------------------  254
                                                                                      
Sbjct  445  CATACGGACCCATTTACGGGGACTGGTCTTTTGAATTAACTGTGTTGGGAGAGGATATTACACTTGCTCCCCAA  518

Query  255  --------------------------------------------------------------------------  254
                                                                                      
Sbjct  519  CTCTCCCACATCTAATCTCTGGCCTTTCTTATCCTACCTGCCTCCTCCTGCCTTCTTCCAAGCTGGTCTCTCCA  592

Query  255  ---------------------------AGGATGTGAAGAGCTGGCAAAACTTGACCTGACTGTGAATTTCATTG  301
                                       |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TCTCCACCTGTGTCATGAATTCCAGGCAGGATGTGAAGAGCTGGCAAAACTTGACCTGACTGTGAATTTCATTG  666

Query  302  GAGAGCTGAGCAGCATTAAAAACTTGCAGCACAATATCCATCTGAAGGAGCTCTTTCTCATGGGGAACCCATGT  375
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GAGAGCTGAGCAGCATTAAAAACTTGCAGCACAATATCCATCTGAAGGAGCTCTTTCTCATGGGGAACCCATGT  740

Query  376  GCTTCCTTTGACCACTATAGGGAGTTCGTGGTAGCAACTCTTCCACAATTAAAGTGGTTGGATGGTAAAGAAAT  449
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||                    
Sbjct  741  GCTTCCTTTGACCACTATAGGGAGTTCGTGGTAGCAACTCTTCCACAATTAAAG--------------------  794

Query  450  AGAGCCTTCAGAAAGGATTAAGGCATTGCAGGACTATTCAGTAATTGAACCACAAATCAGAGAGCAGGAAAAAG  523
                                                                                      
Sbjct  795  --------------------------------------------------------------------------  794

Query  524  ATCACTGTCTTAAACGAGCCAAACTCAAGGAAGAGGCTCAGAGGAAACACCAAGAAGAGGATAAAAATGAAGAC  597
                                                                                      
Sbjct  795  --------------------------------------------------------------------------  794

Query  598  AAGAGAAGTAACGCAGGCTTTGATGGACGTTGGTACACAGACATCAATGCTACTCTTTCCTCTTTAGAGAGCAA  671
                                                                    ||||||||||||||||||
Sbjct  795  --------------------------------------------------------TTCCTCTTTAGAGAGCAA  812

Query  672  AGACCACCTACAGGCACCAGACACAGAGGAACACAACACAAAGAAATTAGACAACAGTGAAGATGACTTGGAAT  745
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  813  AGACCACCTACAGGCACCAGACACAGAGGAACACAACACAAAGAAATTAGACAACAGTGAAGATGACTTGGAAT  886

Query  746  TCTGGAATAAGCCCTGTTTGTTTACTCCTGAATCAAGATTGGAAACTCTTAGACACATGGAAAAACAACGGAAG  819
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  887  TCTGGAATAAGCCCTGTTTGTTTACTCCTGAATCAAGATTGGAAACTCTTAGACACATGGAAAAACAACGGAAG  960

Query  820  AAACAGGAAAAATTAAGTGAAAAAAAGAAGAAAGTGAAACCACCCAGGACTTTGATCACTGAAGATGGGAAAGC  893
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  961  AAACAGGAAAAATTAAGTGAAAAAAAGAAGAAAGTGAAACCACCCAGGACTTTGATCACTGAAGATGGGAAAGC  1034

Query  894  CCTAAATGTGAATGAGCCCAAAATTGACTTCTCTTTGAAAGATAACGAAAAGCAGATCATCCTGGACCTTGCTG  967
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1035  CCTAAATGTGAATGAGCCCAAAATTGACTTCTCTTTGAAAGATAACGAAAAGCAGATCATCCTGGACCTTGCTG  1108

Query  968  TCTATAGGTATATGGATACCTCTTTAATCGATGTTGATGTGCAACCAACTTACGTGCGAGTAATGATCAAAGGA  1041
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1109  TCTATAGGTATATGGATACCTCTTTAATCGATGTTGATGTGCAACCAACTTACGTGCGAGTAATGATCAAAGGA  1182

Query 1042  AAGCCATTTCAGCTTGTCCTTCCTGCAGAAGTGAAACCCGATAGTAGTTCTGCTAAAAGATCTCAGACAACGGG  1115
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1183  AAGCCATTTCAGCTTGTCCTTCCTGCAGAAGTGAAACCCGATAGTAGTTCTGCTAAAAGATCTCAGACAACGGG  1256

Query 1116  TCATTTGGTCATCTGCATGCCCAAGGTAGGAGAAGTAATCACAGGTGGTCAGCGAGCATTCAAATCTATGAAAA  1189
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1257  TCATTTGGTCATCTGCATGCCCAAGGTAGGAGAAGTAATCACAGGTGGTCAGCGAGCATTCAAATCTATGAAAA  1330

Query 1190  CTACCTCGGACAGGAGCAGAGAACAAACAAATACAAGAAGCAAGCACATGGAGAAACTAGAAGTAGACCCTAGC  1263
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1331  CTACCTCGGACAGGAGCAGAGAACAAACAAATACAAGAAGCAAGCACATGGAGAAACTAGAAGTAGACCCTAGC  1404

Query 1264  AAGCACTCATTCCCTGATGTGACTAACATAGTTCAAGAGAAAAAACACACACCCAGAAGACGACCTGAACCCAA  1337
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1405  AAGCACTCATTCCCTGATGTGACTAACATAGTTCAAGAGAAAAAACACACACCCAGAAGACGACCTGAACCCAA  1478

Query 1338  AATTATACCAAGTGAGGAAGACCCAACCTTTGAAGACAACCCTGAAGTGCCTCCGCTGATT-------------  1398
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||             
Sbjct 1479  AATTATACCAAGTGAGGAAGACCCAACCTTTGAAGACAACCCTGAAGTGCCTCCGCTGATTTGAAACATCTGGC  1552

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 1553  TGCGTTGCCATTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGG  1626

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 1627  ATAAACACAGAGTTATTTGTCAATATCGCTGCTCCAGTGTTTTAACTCTTACTTTGCATAGTAATATCCTTAAG  1700

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 1701  ATAGCTTAAAATTAAAATGTATGTCTTAAATGCTATAACTCATCATTTACCTATAATAAAGGGTTGGTATTGAA  1774

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 1775  AATGTTTAGTAAGATCATAGAACTATTGCATAAAACACTGATTATAAATACTGTCTACTTATGCAAAGTATTAA  1848

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 1849  TTCATAGATAAAAGGACTGAGTATTAAATTGGTACTTCAGCAAAGTGGTCAAGCTTAGAAGTTAAAACTGTAAT  1922

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 1923  TTCAGACCCAATTGGAATACTTTAATATGATTTTAAACAGCATTTCCATTTTCCTTCCCATGATGTGTCTGCTT  1996

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 1997  TCTCTGGTGGCATGGTATAATGGCAAGAATATGAGTTTTGAAACCAGACACTCTATATTTGGATTCCAGCTCAA  2070

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 2071  TCACTTTGTAAAGACCTTCAGCAAGTCCTTTAATTCTCTGAGCCTTAGTGGCTTCATGTATAATCTGGGAATAA  2144

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 2145  TAACACTTGCCTCACAGGTTTGTCTCAAGATAAACTGCAGAAAGCACTTAGTACAGTGTCAGCCATACATTTAG  2218

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 2219  AGCCTCTTCTCTCTCTCCTTCTTCCCTTTCTCCTCTCTCTTCTCCTCCCTTTCTCCTGTCTCTCCTCCTCCCTG  2292

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 2293  CTCCTTCTTCCCCTCCCTCCCCAATTACTTTTCTCCCCTTATTCTTTTTCTTCACCTTTTTACTCCCCATCCCA  2366

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 2367  CTCCTTCTCCTCTATTTCCTTCTTTACTTTTTTAATATCCTACCTCTTCTTTATCTAGAACATTATGAATTCAA  2440

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 2441  TATTTCACATACATTGTAGGACAAATTACTGTTACTCTGATCATGATATAGCAACATTTAAGTCAGTTTCCCCA  2514

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 2515  AATATTCATTCAACAAATACTTATTGAGCAACTATTGAGTGCTAGCCCCCTCTCTGTTCATCAGGGATTTAGTA  2588

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 2589  GTAACAAAGCAGACAAATACATACACACAGACTATGTCAGGTGGTGTTCAGAGCTGTGAAGGAGAGTCAGAGTG  2662

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 2663  AGGGAATCAAGGGTGATGGGTGCTTTTTCAGACAGGGCCTTTCTCTATTAAACAGGCTTCCAGTGGAAGACTCT  2736

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 2737  GCTAATGTTTAGCAGATAACCAAAATGCATCAGTTAGAAAAAAATATGATGAGAATGAGGGACTGGTTATAGGA  2810

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 2811  ATGCAATTGGGCACAAATGTGGGAAGAGCTGGGTAGTGAAGCTCTAGAAGGGAGAGGTAGAGAATTGGAAGAAG  2884

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 2885  AAGCACTGGTACAGGTAGACAATTCAGAACTTGCACAGAATCTGAGAAGCTGAAGTAGGACTGTGATTGGGAGC  2958

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 2959  TTGTGGAGAGGTCTATGGAAATTATCATGCTGCTGAAATTGTTGCCTCTATTTATCTGCTACCCTTCTGGTCCG  3032

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 3033  TGGCCAAGATCCTGGTGGGTGGGCTTGGAGCCAGCCTTCGTCAGCAGGCCTGCGGTAAGAAAGATGGGATGGAC  3106

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 3107  ACACAGTGGTGGAGATCAAGGATCAGCTGCAGCAGGCTGGGTCCCTCTGCATCTGTCCATCACTGCGACTGATG  3180

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 3181  GCAATGACTGAGTATAACACCTTTCTTCATGGTCAACTCTACCCAGGAACCACGTAGGGAAGGAAATTCTGGAA  3254

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 3255  AACAGCTCCCAGCCTTAGCCAACTTGACATATCATAATCCAACAGAACTCAACCTCTACCAACTTGGAAATCAT  3328

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 3329  GTACATTTGTCAGGACTGTATTTAATTTCCACATAGAGAGAAAGCAAAATTATACTTTTGACCAAACTAATAGA  3402

Query 1399  ------------------------------  1398
                                          
Sbjct 3403  ATTATCCATTAAACAAACAAAACTGTGCCA  3432

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