Nucleotide Global Alignment

Description

Query:
TRCN0000476467
Subject:
NR_135912.2
Aligned Length:
4582
Identities:
1170
Gaps:
3408

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTCATTCGAGGTCCGGGTCCGGCTTGCGGGGTCAGCGAACTGGAGAGGCGCCATGGGCTGGAGTAAGCCCCCCT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCACCTTCCGTCCTCGATCGTTCCCCTTGTGGAAGTAGTCCCGGGTCTCGTGGGATCCTCGCCGCCCGCTCCCG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCCTGCGCTGTCGGTTCCCCCGCGCCTGGGCGGACCCTAACCCCACCCGGCCCTCCGCACCGCAGCCCCGGCTG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CACCAGGTCCTCTGCAGACTGGCCGGACAGCCTGGCCTTTTCCAGCTCAGGTTCCTAATCTGTAAAATGGGCGG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GGCCGTGGGAAGGGGAGGAAGAGGCAGAAAGGCACTGGACTCCAGGAAAGGGGTCGGGGAACGTGCAGGGGTTT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TGGCGCCAGACACACCACGTTCCGGCCAAGTGGCTCCTTACTGGCTGTGAACGTGGGCCAGTCACTGTCTCCAA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GCCGCAATCTTCGGACTCATTCCGGAAGGCAGTGTAGCCTAATGGTGGAGGGTTCCGACTCTGGAGCCAGGGTT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GAAGTCCTCCCTCTTCCTGTGACTTTGAGCGAGTGACTTCACCCCTTGGGCCTCAGCTTCTTCATCTCCAAAAT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  AATGGCAATCATACTACTGTTTTAGACACAGTAAGTGTTATAAACGTGTTTTTGTTTGTTTGTTTGAGACAAGA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GTTTTGCTCTGTCGCCCAGGCTGGAGTGCAGCGGCGCGATCTCGGCCCACTGCAGCCTCCGCCTCCCGGGTTCA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  AGCAATTCTCCTGCCTCAGCCACCTGAGTAGCTGGGATTACAGCGTGCACCACCACGCCAGGCTAATTTTTGTA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TTCTTAGTAGAGACGGGGTTTTGCCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCGCCCGC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CTCGGCCTCTCAAAGTGCTGCGATTACAGGCGTGAGCCACTGCGCCCGGTAGTAAACGTGTTTCTTTAAGAATA  962

Query    1  ---------------ATGGGCTG-GATCACAGAAGATCTTATTAGACGGAATGCTGAACACAACGACTGTGTCA  58
                           |.|.|.|| |.||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  TACTAACAAACTGCAAGGTGATGCGGTCACAGAAGATCTTATTAGACGGAATGCTGAACACAACGACTGTGTCA  1036

Query   59  TTTTTTCCCTGGAGGAACTCTCGTTGCATCAGCAAGAAATAGAAAGACTAGAACACATTGATAAATGGTGCCGG  132
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  TTTTTTCCCTGGAGGAACTCTCGTTGCATCAGCAAGAAATAGAAAGACTAGAACACATTGATAAATGGTGCCGG  1110

Query  133  GATTTAAAAATTCTCTATCTTCAAAATAATCTTATTGGGAAAATTGAAAATGTTAGCAAACTCAAGAAACTTGA  206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  GATTTAAAAATTCTCTATCTTCAAAATAATCTTATTGGGAAAATTGAAAATGTTAGCAAACTCAAGAAACTTGA  1184

Query  207  ATATTTGAATTTAGCTTTAAACAACATTGAAAAAATAGAAAACTTGGA--------------------------  254
            ||||||||||||||||||||||||||||||||||||||||||||||||                          
Sbjct 1185  ATATTTGAATTTAGCTTTAAACAACATTGAAAAAATAGAAAACTTGGAAGATGTCATCTATTGACTTCCTGATG  1258

Query  255  --------------------------------------------------------------------------  254
                                                                                      
Sbjct 1259  TGGACGATGCAGATTTTGTTCTCTCACACCATCTGCAAGGTTCTCAATTTTCTCCTACCCACCCTCCGTGTATT  1332

Query  255  --------------------------------------------------------------------------  254
                                                                                      
Sbjct 1333  TTCATATGACATTGACAGGATATCATAATGAAATATGGCATACGGACCCATTTACGGGGACTGGTCTTTTGAAT  1406

Query  255  --------------------------------------------------------------------------  254
                                                                                      
Sbjct 1407  TAACTGTGTTGGGAGAGGATATTACACTTGCTCCCCAACTCTCCCACATCTAATCTCTGGCCTTTCTTATCCTA  1480

Query  255  -----------------------------------------------------------------AGGATGTGA  263
                                                                             |||||||||
Sbjct 1481  CCTGCCTCCTCCTGCCTTCTTCCAAGCTGGTCTCTCCATCTCCACCTGTGTCATGAATTCCAGGCAGGATGTGA  1554

Query  264  AGAGCTGGCAAAACTTGACCTGACTGTGAATTTCATTGGAGAGCTGAGCAGCATTAAAAACTTGCAGCACAATA  337
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  AGAGCTGGCAAAACTTGACCTGACTGTGAATTTCATTGGAGAGCTGAGCAGCATTAAAAACTTGCAGCACAATA  1628

Query  338  TCCATCTGAAGGAGCTCTTTCTCATGGGGAACCCATGTGCTTCCTTTGACCACTATAGGGAGTTCGTGGTAGCA  411
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  TCCATCTGAAGGAGCTCTTTCTCATGGGGAACCCATGTGCTTCCTTTGACCACTATAGGGAGTTCGTGGTAGCA  1702

Query  412  ACTCTTCCACAATTAAAGTGGTTGGATGGTAAAGAAATAGAGCCTTCAGAAAGGATTAAGGCATTGCAGGACTA  485
            ||||||||||||||||||                                                        
Sbjct 1703  ACTCTTCCACAATTAAAG--------------------------------------------------------  1720

Query  486  TTCAGTAATTGAACCACAAATCAGAGAGCAGGAAAAAGATCACTGTCTTAAACGAGCCAAACTCAAGGAAGAGG  559
                                                                                      
Sbjct 1721  --------------------------------------------------------------------------  1720

Query  560  CTCAGAGGAAACACCAAGAAGAGGATAAAAATGAAGACAAGAGAAGTAACGCAGGCTTTGATGGACGTTGGTAC  633
                                                                                      
Sbjct 1721  --------------------------------------------------------------------------  1720

Query  634  ACAGACATCAATGCTACTCTTTCCTCTTTAGAGAGCAAAGACCACCTACAGGCACCAGACACAGAGGAACACAA  707
                                ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1721  --------------------TTCCTCTTTAGAGAGCAAAGACCACCTACAGGCACCAGACACAGAGGAACACAA  1774

Query  708  CACAAAGAAATTAGACAACAGTGAAGATGACTTGGAATTCTGGAATAAGCCCTGTTTGTTTACTCCTGAATCAA  781
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1775  CACAAAGAAATTAGACAACAGTGAAGATGACTTGGAATTCTGGAATAAGCCCTGTTTGTTTACTCCTGAATCAA  1848

Query  782  GATTGGAAACTCTTAGACACATGGAAAAACAACGGAAGAAACAGGAAAAATTAAGTGAAAAAAAGAAGAAAGTG  855
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1849  GATTGGAAACTCTTAGACACATGGAAAAACAACGGAAGAAACAGGAAAAATTAAGTGAAAAAAAGAAGAAAGTG  1922

Query  856  AAACCACCCAGGACTTTGATCACTGAAGATGGGAAAGCCCTAAATGTGAATGAGCCCAAAATTGACTTCTCTTT  929
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1923  AAACCACCCAGGACTTTGATCACTGAAGATGGGAAAGCCCTAAATGTGAATGAGCCCAAAATTGACTTCTCTTT  1996

Query  930  GAAAGATAACGAAAAGCAGATCATCCTGGACCTTGCTGTCTATAGGTATATGGATACCTCTTTAATCGATGTTG  1003
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1997  GAAAGATAACGAAAAGCAGATCATCCTGGACCTTGCTGTCTATAGGTATATGGATACCTCTTTAATCGATGTTG  2070

Query 1004  ATGTGCAACCAACTTACGTGCGAGTAATGATCAAAGGAAAGCCATTTCAGCTTGTCCTTCCTGCAGAAGTGAAA  1077
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2071  ATGTGCAACCAACTTACGTGCGAGTAATGATCAAAGGAAAGCCATTTCAGCTTGTCCTTCCTGCAGAAGTGAAA  2144

Query 1078  CCCGATAGTAGTTCTGCTAAAAGATCTCAGACAACGGGTCATTTGGTCATCTGCATGCCCAAGGTAGGAGAAGT  1151
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2145  CCCGATAGTAGTTCTGCTAAAAGATCTCAGACAACGGGTCATTTGGTCATCTGCATGCCCAAGGTAGGAGAAGT  2218

Query 1152  AATCACAGGTGGTCAGCGAGCATTCAAATCTATGAAAACTACCTCGGACAGGAGCAGAGAACAAACAAATACAA  1225
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2219  AATCACAGGTGGTCAGCGAGCATTCAAATCTATGAAAACTACCTCGGACAGGAGCAGAGAACAAACAAATACAA  2292

Query 1226  GAAGCAAGCACATGGAGAAACTAGAAGTAGACCCTAGCAAGCACTCATTCCCTGATGTGACTAACATAGTTCAA  1299
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2293  GAAGCAAGCACATGGAGAAACTAGAAGTAGACCCTAGCAAGCACTCATTCCCTGATGTGACTAACATAGTTCAA  2366

Query 1300  GAGAAAAAACACACACCCAGAAGACGACCTGAACCCAAAATTATACCAAGTGAGGAAGACCCAACCTTTGAAGA  1373
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2367  GAGAAAAAACACACACCCAGAAGACGACCTGAACCCAAAATTATACCAAGTGAGGAAGACCCAACCTTTGAAGA  2440

Query 1374  CAACCCTGAAGTGCCTCCGCTGATT-------------------------------------------------  1398
            |||||||||||||||||||||||||                                                 
Sbjct 2441  CAACCCTGAAGTGCCTCCGCTGATTTGAAACATCTGGCTGCGTTGCCATTGGCTGAGACCCACCAGGTCCAGTT  2514

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 2515  TTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGAGTTATTTGTCAATATCGCTGCTCCA  2588

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 2589  GTGTTTTAACTCTTACTTTGCATAGTAATATCCTTAAGATAGCTTAAAATTAAAATGTATGTCTTAAATGCTAT  2662

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 2663  AACTCATCATTTACCTATAATAAAGGGTTGGTATTGAAAATGTTTAGTAAGATCATAGAACTATTGCATAAAAC  2736

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 2737  ACTGATTATAAATACTGTCTACTTATGCAAAGTATTAATTCATAGATAAAAGGACTGAGTATTAAATTGGTACT  2810

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 2811  TCAGCAAAGTGGTCAAGCTTAGAAGTTAAAACTGTAATTTCAGACCCAATTGGAATACTTTAATATGATTTTAA  2884

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 2885  ACAGCATTTCCATTTTCCTTCCCATGATGTGTCTGCTTTCTCTGGTGGCATGGTATAATGGCAAGAATATGAGT  2958

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 2959  TTTGAAACCAGACACTCTATATTTGGATTCCAGCTCAATCACTTTGTAAAGACCTTCAGCAAGTCCTTTAATTC  3032

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 3033  TCTGAGCCTTAGTGGCTTCATGTATAATCTGGGAATAATAACACTTGCCTCACAGGTTTGTCTCAAGATAAACT  3106

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 3107  GCAGAAAGCACTTAGTACAGTGTCAGCCATACATTTAGAGCCTCTTCTCTCTCTCCTTCTTCCCTTTCTCCTCT  3180

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 3181  CTCTTCTCCTCCCTTTCTCCTGTCTCTCCTCCTCCCTGCTCCTTCTTCCCCTCCCTCCCCAATTACTTTTCTCC  3254

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 3255  CCTTATTCTTTTTCTTCACCTTTTTACTCCCCATCCCACTCCTTCTCCTCTATTTCCTTCTTTACTTTTTTAAT  3328

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 3329  ATCCTACCTCTTCTTTATCTAGAACATTATGAATTCAATATTTCACATACATTGTAGGACAAATTACTGTTACT  3402

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 3403  CTGATCATGATATAGCAACATTTAAGTCAGTTTCCCCAAATATTCATTCAACAAATACTTATTGAGCAACTATT  3476

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 3477  GAGTGCTAGCCCCCTCTCTGTTCATCAGGGATTTAGTAGTAACAAAGCAGACAAATACATACACACAGACTATG  3550

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 3551  TCAGGTGGTGTTCAGAGCTGTGAAGGAGAGTCAGAGTGAGGGAATCAAGGGTGATGGGTGCTTTTTCAGACAGG  3624

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 3625  GCCTTTCTCTATTAAACAGGCTTCCAGTGGAAGACTCTGCTAATGTTTAGCAGATAACCAAAATGCATCAGTTA  3698

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 3699  GAAAAAAATATGATGAGAATGAGGGACTGGTTATAGGAATGCAATTGGGCACAAATGTGGGAAGAGCTGGGTAG  3772

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 3773  TGAAGCTCTAGAAGGGAGAGGTAGAGAATTGGAAGAAGAAGCACTGGTACAGGTAGACAATTCAGAACTTGCAC  3846

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 3847  AGAATCTGAGAAGCTGAAGTAGGACTGTGATTGGGAGCTTGTGGAGAGGTCTATGGAAATTATCATGCTGCTGA  3920

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 3921  AATTGTTGCCTCTATTTATCTGCTACCCTTCTGGTCCGTGGCCAAGATCCTGGTGGGTGGGCTTGGAGCCAGCC  3994

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 3995  TTCGTCAGCAGGCCTGCGGTAAGAAAGATGGGATGGACACACAGTGGTGGAGATCAAGGATCAGCTGCAGCAGG  4068

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 4069  CTGGGTCCCTCTGCATCTGTCCATCACTGCGACTGATGGCAATGACTGAGTATAACACCTTTCTTCATGGTCAA  4142

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 4143  CTCTACCCAGGAACCACGTAGGGAAGGAAATTCTGGAAAACAGCTCCCAGCCTTAGCCAACTTGACATATCATA  4216

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 4217  ATCCAACAGAACTCAACCTCTACCAACTTGGAAATCATGTACATTTGTCAGGACTGTATTTAATTTCCACATAG  4290

Query 1399  --------------------------------------------------------------------  1398
                                                                                
Sbjct 4291  AGAGAAAGCAAAATTATACTTTTGACCAAACTAATAGAATTATCCATTAAACAAACAAAACTGTGCCA  4358

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