Nucleotide Global Alignment
Description
- Query:
- TRCN0000477262
- Subject:
- NR_147913.2
- Aligned Length:
- 4302
- Identities:
- 2925
- Gaps:
- 1346
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTCCCCGCCTCGCGCGGCGGCGGCGGCGGGTGAGGAGCCTGAGGCGGCGGCGGGGGTGGCTCCGCGCGCGGTGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCTCGGGGGCAAAATAACATGGCAGCCAGACGAATTACACAGGAGACTTTTGATGCTGTATTACAAGAAAAAGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CAAACGATATCACATGGATGCCAGTGGTGAGGCTGTAAGCGAAACTCTTCAGTTTAAAGCTCAAGATCTCTTAA 222
Query 1 --------------------------ATGTATGATGACGTCCACAGCGATGGCAGATACTCCCTCAGTGGATCT 48
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GGGCAGTCCCAAGATCCAGAGCAGAGATGTATGATGACGTCCACAGCGATGGCAGATACTCCCTCAGTGGATCT 296
Query 49 GTAGCTCACTCTAGAGATGCCGGAAGAGAAGGCCTGAGAAGTGACGTATTTCCAGGGCCTTCCTTCAGATCAAG 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GTAGCTCACTCTAGAGATGCCGGAAGAGAAGGCCTGAGAAGTGACGTATTTCCAGGGCCTTCCTTCAGATCAAG 370
Query 123 CAACCCTTCCATCAGTGATGACAGCTACTTTCGCAAAGAATGTGGCCGGGATCTGGAATTTTCTCACTCTGATT 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CAACCCTTCCATCAGTGATGACAGCTACTTTCGCAAAGAATGTGGCCGGGATCTGGAATTTTCTCACTCTGATT 444
Query 197 CTCGGGACCAGGTCATTGGCCACCGGAAATTGGGGCATTTCCGTTCTCAGGACTGGAAATTTGCGCTCCGTGGT 270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CTCGGGACCAGGTCATTGGCCACCGGAAATTGGGGCATTTCCGTTCTCAGGACTGGAAATTTGCGCTCCGTGGT 518
Query 271 TCTTGGGAACAAGACTTTGGCCATCCAGTTTCTCAAGAGTCCTCTTGGTCACAGGAGTATAGTTTTGGTCCCTC 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TCTTGGGAACAAGACTTTGGCCATCCAGTTTCTCAAGAGTCCTCTTGGTCACAGGAGTATAGTTTTGGTCCCTC 592
Query 345 TGCAGTTTTGGGGGACTTTGGATCTTCCAGGCTGATTGAGAAAGAGTGTTTGGAGAAGGAGAGTCGGGATTATG 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TGCAGTTTTGGGGGACTTTGGATCTTCCAGGCTGATTGAGAAAGAGTGTTTGGAGAAGGAGAGTCGGGATTATG 666
Query 419 ACGTGGACCATCCTGGGGAGGCTGACTCTGTGCTTAGGGGCAGCAGTCAAGTCCAGGCCAGAGGTCGAGCTCTA 492
|||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||
Sbjct 667 ACGTGGACCATCCTGGGGAGGCTGACTCTGTGCTTAGGGGCGGCAGTCAAGTCCAGGCCAGAGGTCGAGCTCTA 740
Query 493 AACATCGTTGACCAGGAAGGTTCCCTCCTAGGAAAGGGGGAGACTCAGGGCCTGCTCACAGCTAAGGGGGGTGT 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AACATCGTTGACCAGGAAGGTTCCCTCCTAGGAAAGGGGGAGACTCAGGGCCTGCTCACAGCTAAGGGGGGTGT 814
Query 567 TGGGAAACTTGTCACATTGAGAAATGTGAGCACAAAAAAAATACCCACCGTGAATCGTATTACTCCCAAAACTC 640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TGGGAAACTTGTCACATTGAGAAATGTGAGCACAAAAAAAATACCCACCGTGAATCGTATTACTCCCAAAACTC 888
Query 641 AGGGCACTAACCAAATCCAGAAAAACACTCCAAGTCCTGATGTGACCCTGGGGACAAACCCAGGGACAGAAGAT 714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AGGGCACTAACCAAATCCAGAAAAACACTCCAAGTCCTGATGTGACCCTGGGGACAAACCCAGGGACAGAAGAT 962
Query 715 ATCCAGTTCCCCATTCAGAAGATCCCTCTGGGGCTGGATCTGAAGAATCTTCGGCTCCCCAGAAGAAAGATGAG 788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 ATCCAGTTCCCCATTCAGAAGATCCCTCTGGGGCTGGATCTGAAGAATCTTCGGCTCCCCAGAAGAAAGATGAG 1036
Query 789 CTTTGACATCATAGATAAGTCTGATGTTTTTTCAAGATTTGGGATAGAAATAATCAAATGGGCAGGATTCCACA 862
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CTTTGACATCATAGATAAGTCTGATGTTTTTTCAAGATTTGGGATAGAAATAATCAAATGGGCAGGATTCCACA 1110
Query 863 CCATAAAAGATGATATTAAATTTTCCCAACTTTTCCAGACTCTCTTTGAACTTGAAACAGAAACCTGTGCTAAA 936
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CCATAAAAGATGATATTAAATTTTCCCAACTTTTCCAGACTCTCTTTGAACTTGAAACAGAAACCTGTGCTAAA 1184
Query 937 ATGCTTGCCTCATTCAAATGTTCCTTAAAACCAGAGCACAGAGATTTTTGCTTTTTTACTATCAAATTTTTAAA 1010
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 ATGCTTGCCTCATTCAAATGTTCCTTAAAACCAGAGCACAGAGATTTTTGCTTTTTTACTATCAAATTTTTAAA 1258
Query 1011 GCACTCTGCTTTGAAAACACCCAGAGTTGATAATGAGTTTTTAAACATGCTTTTAGACAAAGGTGCTGTGAAGA 1084
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 GCACTCTGCTTTGAAAACACCCAGAGTTGATAATGAGTTTTTAAACATGCTTTTAGACAAAGGTGCTGTGAAGA 1332
Query 1085 CCAAAAATTGCTTTTTTGAAATCATAAAGCCTTTTGACAAGTACATAATGAGACTTCAAGACCGGCTTCTGAAG 1158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 CCAAAAATTGCTTTTTTGAAATCATAAAGCCTTTTGACAAGTACATAATGAGACTTCAAGACCGGCTTCTGAAG 1406
Query 1159 AGTGTCACACCTTTGCTTATGGCCTGCAATGCCTACGAGCTAAGTGTCAAGATGAAGACCCTCAGTAACCCCCT 1232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 AGTGTCACACCTTTGCTTATGGCCTGCAATGCCTACGAGCTAAGTGTCAAGATGAAGACCCTCAGTAACCCCCT 1480
Query 1233 GGACTTGGCTCTTGCCCTAGAAACCACCAACTCTCTCTGCCGGAAGTCTTTGGCCCTTTTGGGACAGACATTTT 1306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 GGACTTGGCTCTTGCCCTAGAAACCACCAACTCTCTCTGCCGGAAGTCTTTGGCCCTTTTGGGACAGACATTTT 1554
Query 1307 CCTTGGCCTCTTCTTTCCGGCAGGAGAAAATCTTAGAAGCTGTCGGCCTGCAAGATATAGCTCCCTCACCTGCT 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 CCTTGGCCTCTTCTTTCCGGCAGGAGAAAATCTTAGAAGCTGTCGGCCTGCAAGATATAGCTCCCTCACCTGCT 1628
Query 1381 GCGTTTCCAAACTTCGAAGACTCCACTTTGTTTGGGCGAGAGTACATAGACCACCTGAAGGCCTGGCTAGTCAG 1454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 GCGTTTCCAAACTTCGAAGACTCCACTTTGTTTGGGCGAGAGTACATAGACCACCTGAAGGCCTGGCTAGTCAG 1702
Query 1455 CAGCGGATGTCCCCTCCAGGTTAAGAAAGCCGAACCAGAGCCGATGCGAGAGGAGGAGAAAATGATTCCTCCTA 1528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 CAGCGGATGTCCCCTCCAGGTTAAGAAAGCCGAACCAGAGCCGATGCGAGAGGAGGAGAAAATGATTCCTCCTA 1776
Query 1529 CGAAACCTGAAATTCAGGCCAAGGCTCCAAGTAGTCTGAGTGATGCTGTCCCCCAGCGAGCAGATCACAGGGTA 1602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 CGAAACCTGAAATTCAGGCCAAGGCTCCAAGTAGTCTGAGTGATGCTGTCCCCCAGCGAGCAGATCACAGGGTA 1850
Query 1603 GTGGGCACCATCGACCAGCTTGTGAAACGTGTCATCGAAGGCAGCCTGTCTCCCAAAGAGAGAACTCTTCTCAA 1676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 GTGGGCACCATCGACCAGCTTGTGAAACGTGTCATCGAAGGCAGCCTGTCTCCCAAAGAGAGAACTCTTCTCAA 1924
Query 1677 AGAGGACCCTGCTTACTGGTTTTTGTCTGATGAAAATAGTCTGGAGTATAAATATTACAAGCTGAAGTTGGCAG 1750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 AGAGGACCCTGCTTACTGGTTTTTGTCTGATGAAAATAGTCTGGAGTATAAATATTACAAGCTGAAGTTGGCAG 1998
Query 1751 AAATGCAGCGGATGAGCGAGAACTTGCGAGGAGCCGACCAGAAGCCGACCTCAGCAGACTGTGCAGTGAGGGCC 1824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 AAATGCAGCGGATGAGCGAGAACTTGCGAGGAGCCGACCAGAAGCCGACCTCAGCAGACTGTGCAGTGAGGGCC 2072
Query 1825 ATGCTGTACTCCCGGGCTGTCCGCAACCTCAAGAAGAAACTCCTTCCGTGGCAGCGGCGGGGGCTCCTCCGTGC 1898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 ATGCTGTACTCCCGGGCTGTCCGCAACCTCAAGAAGAAACTCCTTCCGTGGCAGCGGCGGGGGCTCCTCCGTGC 2146
Query 1899 TCAAGGGCTCCGGGGCTGGAAGGCGAGGAGAGCGACCACCGGGACCCAGACCCTCCTATCCTCAGGCACCAGGC 1972
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 TCAAGGGCTCCGGGGCTGGAAGGCGAGGAGAGCGACCACCGGGACCCAGACCCTCCTATCCTCAGGCACCAGGC 2220
Query 1973 TGAAACACCACGGCCGGCAGGCTCCAGGCCTCTCACAGGCAAAACCATCCCTGCCAGACAGAAATGATGCTGCC 2046
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 TGAAACACCACGGCCGGCAGGCTCCAGGCCTCTCACAGGCAAAACCATCCCTGCCAGACAGAAATGATGCTGCC 2294
Query 2047 AAGGACTGCCCGCCAGACCCAGTTGGACCTTCTCCTCAGGACCCCAGCTTAGAAGCCTCAGGCCCATCCCCCAA 2120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 AAGGACTGCCCGCCAGACCCAGTTGGACCTTCTCCTCAGGACCCCAGCTTAGAAGCCTCAGGCCCATCCCCCAA 2368
Query 2121 GCCAGCAGGAGTGGACATCTCTGAAGCACCTCAGACCTCTTCTCCCTGCCCATCTGCTGACATTGACATGAAGA 2194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 GCCAGCAGGAGTGGACATCTCTGAAGCACCTCAGACCTCTTCTCCCTGCCCATCTGCTGACATTGACATGAAGA 2442
Query 2195 CAATGGAGACTGCAGAGAAACTGGCTAGATTTGTTGCTCAGGTGGGACCAGAGATCGAACAATTCAGCATAGAA 2268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 CAATGGAGACTGCAGAGAAACTGGCTAGATTTGTTGCTCAGGTGGGACCAGAGATCGAACAATTCAGCATAGAA 2516
Query 2269 AACAGCACCGATAACCCTGACCTGTGGTTTCTACATGACCAAAATAGTTCTGCTTTCAAATTCTATCGAAAGAA 2342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 AACAGCACCGATAACCCTGACCTGTGGTTTCTACATGACCAAAATAGTTCTGCTTTCAAATTCTATCGAAAGAA 2590
Query 2343 AGTGTTTGAACTATGTCCATCAATTTGTTTCACGTCATCTCCGCACAACCTTCACACTGGTGGTGGTGACACCA 2416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 AGTGTTTGAACTATGTCCATCAATTTGTTTCACGTCATCTCCGCACAACCTTCACACTGGTGGTGGTGACACCA 2664
Query 2417 CGGGTTCTCAGGAGAGCCCCGTGGACCTCATGGAAGGGGAAGCAGAGTTTGAAGACGAGCCCCCTCCGCGGGAG 2490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665 CGGGTTCTCAGGAGAGCCCCGTGGACCTCATGGAAGGGGAAGCAGAGTTTGAAGACGAGCCCCCTCCGCGGGAG 2738
Query 2491 GCTGAGCTGGAGAGCCCAG------------------------------------------------------- 2509
|||||||||||||||||||
Sbjct 2739 GCTGAGCTGGAGAGCCCAGAGGTGATGCCTGAGGAGGAGGACGAGGACGATGAGGATGGGGGAGAGGAGGCCCC 2812
Query 2510 -------------------------------------------------------------------------- 2509
Sbjct 2813 CGCTCCTGGAGGGGCGGGCAAGTCTGAGGGCAGCACCCCTGCCGACGGCCTTCCCGGCGAGGCTGCCGAGGACG 2886
Query 2510 ---------------------------AGGCCTCCTCAGGTACCTGCTTCCCTCGGAAGAGGATCAGCAGCAAG 2556
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2887 ACCTGGCTGGAGCACCTGCCTTGTCACAGGCCTCCTCAGGTACCTGCTTCCCTCGGAAGAGGATCAGCAGCAAG 2960
Query 2557 TCATTGAAGGTTGGCATGATTCCAGCTCCCAAGAGAGTGTGTCTCATCCAGGAGCCAAAAGTCCATGAACCAGT 2630
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2961 TCATTGAAGGTTGGCATGATTCCAGCTCCCAAGAGAGTGTGTCTCATCCAGGAGCCAAAAGTCCATGAACCAGT 3034
Query 2631 TCGAATTGCCTATGACAGGCCTCGGGGTCGTCCCATGTCCAAAAAGAAGAAACCCAAGGACTTGGACTTCGCCC 2704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3035 TCGAATTGCCTATGACAGGCCTCGGGGTCGTCCCATGTCCAAAAAGAAGAAACCCAAGGACTTGGACTTCGCCC 3108
Query 2705 AGCAGAAGCTGACCGATAAGAACCTGGGCTTCCAGATGCTGCAGAAGATGGGCTGGAAGGAGGGCCATGGCCTG 2778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3109 AGCAGAAGCTGACCGATAAGAACCTGGGCTTCCAGATGCTGCAGAAGATGGGCTGGAAGGAGGGCCATGGCCTG 3182
Query 2779 GGCTCCCTCGGAAAGGGCATCAGGGAGCCGGTCAGCG------------------------------------- 2815
|||||||||||||||||||||||||||||||||||||
Sbjct 3183 GGCTCCCTCGGAAAGGGCATCAGGGAGCCGGTCAGCGTGGGAACCCCCTCGGAAGGGGAAGGGTTGGGTGCTGA 3256
Query 2816 --------------------------------------------------------TGTAC------------- 2820
|||||
Sbjct 3257 CGGGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCGACAGAGGATGATGCAGATGTACAGACACAAGCGGG 3330
Query 2821 ---------------------------------------------GCAGCA----------------------- 2826
||||||
Sbjct 3331 CCAACAAATAGATCAAAACCACTGATGTGAAAGATAAGCCTTGAAGCAGCAATTGCCCTTAAAACATCATCCCT 3404
Query 2827 -----GG--CAGCCTGG-----------------GGT--------------------------GGGAGTGGGTG 2850
|| |.|||||| ||| |.||.|||.||
Sbjct 3405 GCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGCTTCCATGTTGGCCATGGGTCAGGTGAATGGATG 3478
Query 2851 -----------GGGCCTCAGTCCTTCCACCTGCAG-------------CCTGCCGCTTGG-------------- 2886
|||.|||||.||.|..|||.| || |||||.||.|||
Sbjct 3479 GAGCTCCAAGCGGGGCTCAGCCCATTGACCCG-AGCGAGGCGCACACACCTGCAGCGTGGATCAAGCGCACTCT 3551
Query 2887 CTCCTTCACAGCCAAG--------ATG-GCTTACAGCTGGCA-GTTGATTTTTG----------------TTTT 2934
||||..||..|||..| ||| ||||....||.||| |||.|||.||| |||.
Sbjct 3552 CTCCAGCATCGCCCTGACCATTCCATGTGCTTTGTCCTAGCATGTTCATTCTTGACTTTCTCCACTTCATTTTA 3625
Query 2935 TTAAACAG---AAGGCATCTTCAGATGAGAAGC----------------------------------------- 2964
|||||.|| ||.| |||.|| |||.|
Sbjct 3626 TTAAAAAGTTAAATG---CTTTAG----GAATCTGTGGCGTGTGGCCACTGACCGCCCCCCACCTCCTGCCGCT 3692
Query 2965 -------------------------------------------------------------------------- 2964
Sbjct 3693 CCTCCAAGTTTGAGCTGAGATGGTTCTGTGAGTCCTTGGCAGGGGTCAAAGGGCACATCTCCTTGAACCTAGAA 3766
Query 2965 -------------------------------------------------------------------------- 2964
Sbjct 3767 AGCCCCCTACACTCTCAGAGGACACCTCTCCTGTGGATTCAGCGCTGGGGCAGTGAAGGTGTCGGGAGCCAGCA 3840
Query 2965 -------------------------------------------------------------------------- 2964
Sbjct 3841 GAGCATGGTGCGTGCTGCCAGCTGCCGGCCAGCCGGGATAGAGGAGATGCCACTGGCCCTCCGTGCCCCCAGCC 3914
Query 2965 -------------------------------------------------------------------------- 2964
Sbjct 3915 CCTCCCTCTTAACCGAGGCTGTCCTTGCTCTCTGCAGAGGCCGCTCTGCAGGATCCTCGTGTCGCGCGTGATGT 3988
Query 2965 -------------------------------------------------------------------------- 2964
Sbjct 3989 GTGGTGGCACAGCCGTGTCAAAGTCACAGTGTCTTTTCTGTCGTTCTAGTTCCAGGGTCACCCCCGAGAGGACA 4062
Query 2965 -------------------------------------------------------------------------- 2964
Sbjct 4063 ACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCCATCACTGGAAATC 4136
Query 2965 -------------------------------------------------------------------------- 2964
Sbjct 4137 ACTTAGAGAATTGTAGTGTTTTTGGTCCTTGATAAAGCCTAGAAGACATTTGTGATGTTACAAAATGGAAGTTT 4210
Query 2965 -------------------------------------------------------------------------- 2964
Sbjct 4211 TCTTTTGTTTCTGTTTTTTAAGATCTAAGAAGTTGTGAATGTTGTTAATCATTTAGCCGTTGCAATAAATGTAG 4284
Query 2965 ---------- 2964
Sbjct 4285 AGGAAATGCA 4294