Nucleotide Global Alignment
Description
- Query:
- TRCN0000477633
- Subject:
- XM_006513475.2
- Aligned Length:
- 2688
- Identities:
- 1328
- Gaps:
- 1143
Alignment
Query 1 ATGTCAGCTGAAACACCAATCACATTGAATATCGATCCTCAGGATCTGCAGGTCCAAACATTCACCGTGGAGAA 74
|||||.||.|||||.|||||.||..|||||||.||..||||||||||||||.|||||||.|||||.||||||||
Sbjct 1 ATGTCGGCAGAAACGCCAATAACCCTGAATATGGACACTCAGGATCTGCAGATCCAAACGTTCACTGTGGAGAA 74
Query 75 GCTACTGGAGCCTCTCATAATCCAGGTTACCACACTTGTAAACTGTCCCCAGAACCCTTCCAGCAGGAAAAAAG 148
.||.|||||||||||.||||||||||||||.||.||.||.||.|||||.|||||.|||||||.||||||.||||
Sbjct 75 ACTGCTGGAGCCTCTGATAATCCAGGTTACTACCCTGGTGAATTGTCCGCAGAATCCTTCCAACAGGAAGAAAG 148
Query 149 GACGTTCGAAAAGAGCCAGTGTCCTTCTAGCTTCTGTGGAGGAAGCAACTTGGAATTTATTAGACAAGGGAGAG 222
|||||||.||.||||||||.||.|||||||||||.|||||||||||||||||||||||.|||||||||||.|||
Sbjct 149 GACGTTCAAAGAGAGCCAGAGTTCTTCTAGCTTCCGTGGAGGAAGCAACTTGGAATTTGTTAGACAAGGGGGAG 222
Query 223 AAGATTGCCCAGGAAGCTACAGTTTTAAAGGATGAGCTTACGGCTTCACTTGAGGAAGTTCGCAAAGAAAGTGA 296
|.||||||..|||||||.||.|||||||||||.|||||..|.|||.||||..||||||||||.|||||.||..|
Sbjct 223 ATGATTGCTAAGGAAGCCACGGTTTTAAAGGAAGAGCTGGCAGCTGCACTCCAGGAAGTTCGAAAAGAGAGCAA 296
Query 297 AGCTCTGAAAGTATCAGCTGAGAGATTTACAGATGACCCCTGTTTTCTCCCAAAAAGGGAGGCTGTGGTTCAAG 370
|||||||||.|||||||||||||||||||||||.||||||||||..|||||.|||||||||||.||||||||||
Sbjct 297 AGCTCTGAAGGTATCAGCTGAGAGATTTACAGACGACCCCTGTTACCTCCCGAAAAGGGAGGCCGTGGTTCAAG 370
Query 371 CTGCCCGTGCCTTGCTGGCTGCGGTGACGAGACTCCTTATCCTTGCGGACATGATTGATGTCATGTGCCTCTTG 444
|.|||||.|||.||.||||.||.||.||.|||||||||.|.|||||.|||||||||||||||||||||||||||
Sbjct 371 CCGCCCGCGCCCTGTTGGCAGCAGTTACAAGACTCCTTGTTCTTGCCGACATGATTGATGTCATGTGCCTCTTG 444
Query 445 CAACATGTGTCAGCTTTTCAAAGGACATTTGAGTCTCTCAAAAATGTTGCCAACAAATCTGACCTCCAGAAAAC 518
||.|||||||||.||||.|||||.|||||.||||||||||||||||||.|||||||.||.||||||||||.|||
Sbjct 445 CAGCATGTGTCATCTTTCCAAAGAACATTCGAGTCTCTCAAAAATGTTTCCAACAAGTCCGACCTCCAGAGAAC 518
Query 519 CTACCAGAAGCTTGGGAAGGAGCTGGAAAATTTGGATTATTTAGCCTTCAAACGTCAGCAGGACTTAAAATCTC 592
||||||||||||.||||||||||||||||...||||||||||.|||||||||||.|||||||||.|||||||||
Sbjct 519 CTACCAGAAGCTCGGGAAGGAGCTGGAAAGCCTGGATTATTTGGCCTTCAAACGCCAGCAGGACCTAAAATCTC 592
Query 593 CAAATCAGAGAGATGAAATTGCAGGAGCCCGAGCTTCAC--TGAAGGAGAACTCTCCCCTCTTGCATTCAATTT 664
|||..|||||.||||||||||||||.|||||.|| ||| |||||||||||||.||.|||.|||||||.||||
Sbjct 593 CAAGCCAGAGGGATGAAATTGCAGGGGCCCGGGC--CACCTTGAAGGAGAACTCCCCACTCCTGCATTCTATTT 664
Query 665 GTTCAGCTTGTTTGGAGCATTCTGATGTTGCTTCCCTCAAAGCAAGCAAGGACACAGTTTGTGAAGAAATTCAG 738
|||||||.||.|||||.|||||.|||||||||||.||||||||.||.||||||||.||.||||||||.||.|||
Sbjct 665 GTTCAGCATGCTTGGAACATTCCGATGTTGCTTCGCTCAAAGCCAGTAAGGACACCGTCTGTGAAGAGATCCAG 738
Query 739 AATGCTCTCAATGTAATTTCAAATGCTTCACAAGGGATCCAGAATATGACAACCCCACCAGAACCTCAGGCAGC 812
||.|||||..|||||||||||||||||||.|||||.|||||||||..|.||.|.||.||.||||||||||||||
Sbjct 739 AACGCTCTTGATGTAATTTCAAATGCTTCCCAAGGCATCCAGAATGCGCCAGCGCCCCCTGAACCTCAGGCAGC 812
Query 813 AACCCTGGGAAGTGCCCTTGATGAGCTGGAGAATTTAATTGTCCTGAATCCACTCACAGTAACTGAGGAGGAAA 886
|||.|||||||||||..||||||||||||||||.||||||||||||||.|||||||||||.||.|||||.||..
Sbjct 813 AACACTGGGAAGTGCTTTTGATGAGCTGGAGAACTTAATTGTCCTGAACCCACTCACAGTGACAGAGGAAGATG 886
Query 887 TACGACCATCACTAGAGAAACGCCTTGAAGCCATTATCAGTGGGGCTGCTCTGCTGGCGGATTCTTCATGTACG 960
||.||||||||||||||||||||||.||||||||.|||||||||||.||.|||.||||.||.||.||.||.||.
Sbjct 887 TAAGACCATCACTAGAGAAACGCCTAGAAGCCATCATCAGTGGGGCCGCACTGTTGGCCGACTCGTCCTGCACC 960
Query 961 AGGGACTTACACCGAGAGCGGATTATCGCAGAATGCAACGCCATTCGCCAGGCTCTTCAGGATCTGCTTTCAGA 1034
||||||.|.|||||.||||||||||||||.||.|||||.|||||.|||||||||||.|||||.|||||..|.||
Sbjct 961 AGGGACCTCCACCGGGAGCGGATTATCGCCGAGTGCAATGCCATCCGCCAGGCTCTCCAGGACCTGCTGACGGA 1034
Query 1035 GTACATGAACAACGCTGGAAAAAAAGAAAGGAGTAATACCCTGAATATTGCTTTAGACAACATGTGTAAGAAGA 1108
||||||||..||..|||||||||.|||||||||||||||||||||||.|||..|.|.|||||||.|.|||||||
Sbjct 1035 GTACATGAGTAATACTGGAAAAACAGAAAGGAGTAATACCCTGAATACTGCCATTGTCAACATGAGCAAGAAGA 1108
Query 1109 CAAGAGACCTTCGCAGACAGCTCCGCAAGGCTATTATAGATCATGTGTCAGACTCTTTCCTGGATACGACAGTC 1182
||||||||||.|||||||||||||||||.|||||.||||||||..|.|||||.||||||.|||||||.|||||.
Sbjct 1109 CAAGAGACCTCCGCAGACAGCTCCGCAAAGCTATCATAGATCACATATCAGATTCTTTCTTGGATACAACAGTT 1182
Query 1183 CCTCTTTTGGTTCTCATTGAAGCTGCTAAGAATGGCCGGGAAAAGGAAATAAAAGAATATGCTGCGATATTTCA 1256
||.||..||||.||||||||||||||.|||||||||||.|..||||||||.|||||.||||||||.||||||||
Sbjct 1183 CCACTCCTGGTCCTCATTGAAGCTGCGAAGAATGGCCGAGTCAAGGAAATCAAAGACTATGCTGCCATATTTCA 1256
Query 1257 TGAACACACCAGCAGGCTTGTAGAGGTGGCAAATCTTGCTTGTTCCATGTCAACAAATGAAGATGGAATTAAAA 1330
|||.|||||..|||||||.||.||||||||||||||.|||||||||||||||||.|||||||||||.|||||||
Sbjct 1257 TGAGCACACTGGCAGGCTCGTGGAGGTGGCAAATCTGGCTTGTTCCATGTCAACGAATGAAGATGGGATTAAAA 1330
Query 1331 TTGTCAAAATTGCAGCCAATCATTTGGAAACCTTGTGTCCACAGATTATTAATGCTGCACTTGCTTTGGCTGCA 1404
|.||||.|||||||||||||||..||||.|||.|||||||||||||.||.||||||||||||||||||||..||
Sbjct 1331 TCGTCAGAATTGCAGCCAATCACCTGGAGACCCTGTGTCCACAGATCATAAATGCTGCACTTGCTTTGGCATCA 1404
Query 1405 AGACCCAAAAGTCAAGCGGTCAAAAACACCATGGAAATGTACAAGCGTACATGGGAGAATCATATACATGTCCT 1478
||||||||.|||||||.||||||||||||||||||||||||||||||.||||||||..|..|.||.||.|||||
Sbjct 1405 AGACCCAAGAGTCAAGTGGTCAAAAACACCATGGAAATGTACAAGCGCACATGGGAACACTACATCCACGTCCT 1478
Query 1479 CACTGAAGCCGTAGATGACATTACAAGCATTGATGACTTCCTTGCTGTATCTG-----------------GTAT 1535
|||||||||.|||||||||||.||.||||||||.|||||.||.|||||||||| | ||
Sbjct 1479 CACTGAAGCTGTAGATGACATCACCAGCATTGACGACTTTCTGGCTGTATCTGAAAGCCACATCCTGGAAG-AT 1551
Query 1536 GT-----------TTTTATTCTTT-------------------------------------------------- 1548
|| ||.||..|||.
Sbjct 1552 GTCAACAAATGCATTATAGCCTTGAGAGATCAGGATGCTGATAATTTAGACCGAGCTGCCGGTGCCATCAGAGG 1625
Query 1549 -------------------------------------------------------------------------- 1548
Sbjct 1626 ACGGGCCGCAAGAGTAGCTCACATCGTTGCGGGTGAAATGGATAGTTACGAACCCGGCGCTTACACCGAAGGTG 1699
Query 1549 -------------------------------------------------------------------------- 1548
Sbjct 1700 TGATGAGAAATGTCAACTTCCTTACAAGCACTGTGATCCCGGAGTTCGTGACACAAGTGAATGTGGCCCTAGAT 1773
Query 1549 -------------------------------------------------------------------------- 1548
Sbjct 1774 GCTTTAAGCAAGAACTCTCTGACTGCGCTTGATGATAATCAGTTTGTGGACATCTCCAAGAAGATCTATGACAC 1847
Query 1549 -------------------------------------------------------------------------- 1548
Sbjct 1848 AATCCATGATATCAGGTGTTCGGTCATGATGATTCGGACACCAGAGGAACTAGAGGATGTTTCTGACCTTGAAG 1921
Query 1549 -------------------------------------------------------------------------- 1548
Sbjct 1922 ATGACCATGAGGTCCGTAGCCACACCAGCATTCAGACAGAAGGGAAAACTGATCGGGCCAAGATGACTCAACTG 1995
Query 1549 -------------------------------------------------------------------------- 1548
Sbjct 1996 CCTGAGGCAGAAAAGGAAAAGATTGCTGAGCAAGTCGCCGACTTCAAGAAGGTGAAGAGCAAGCTGGACGCTGA 2069
Query 1549 -------------------------------------------------------------------------- 1548
Sbjct 2070 GATTGAGATATGGGATGACACAAGCAATGACATCATTGTTCTTGCCAAGAAGATGTGCATGATCATGATGGAGA 2143
Query 1549 -------------------------------------------------------------------------- 1548
Sbjct 2144 TGACCGACTTCACGAGGGGGAAAGGACCACTAAAGCATACCACTGATGTAATCTATGCAGCTAAAATGATATCA 2217
Query 1549 -------------------------------------------------------------------------- 1548
Sbjct 2218 GAGTCAGGATCAAGGATGGATGTTCTTGCTCGGCAGATTGCTAACCAGTGTCCAGATCCACCGTGCAAACAGGA 2291
Query 1549 -------------------------------------------------------------------------- 1548
Sbjct 2292 CTTGCTGGCTTACCTGGAACAGATTAAATTCTACTCCCACCAGCTGAAAATCTGCAGTCAAGTTAAAGCAGAGA 2365
Query 1549 -------------------------------------------------------------------------- 1548
Sbjct 2366 TCCAAAATCTGGGGGGAGAACTCATCGTATCAGCTTTGGACAGTGTCACCTCCCTGATCCAGGCAGCCAAGAAT 2439
Query 1549 -------------------------------------------------------------------------- 1548
Sbjct 2440 TTAATGAATGCTGTAGTGCAAACAGTGAAAATGTCATACATTGCCTCCACCAAGATCATCCGCATCCAGAGTTC 2513
Query 1549 -------------------------------------------------------------------------- 1548
Sbjct 2514 TGCAGGACCCCGGCACCCAGTAGTCATGTGGAGGATGAAGGCTCCGGCTAAGAAGCCCTTGATTAAAAGAGAGA 2587
Query 1549 -------------------------------------------------------------------------- 1548
Sbjct 2588 AGCCAGAAGAAACATGGGCAGCTGTCAGAAGAGGCTCTGCCAAGAAAAAGATCCACCCAGTTCAAGTCATGAGT 2661
Query 1549 ------------------------ 1548
Sbjct 2662 GAATTCAGAGGGAGACAAGTCTAC 2685
