Nucleotide Global Alignment
Description
- Query:
- TRCN0000477911
- Subject:
- XM_017017928.1
- Aligned Length:
- 2735
- Identities:
- 1047
- Gaps:
- 1678
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCTTCCTCTTGGAAACTAATGCTGTTTCTGTCAGTCACCATGTGTCTTTCAGAGTATTCAAAATCTCTTCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGGTCTCTCCACTTCATATGCTGCTTTGTTAAGAATTAAGAAGAGTTCATCTTCATCTCTCTTTGGTTCCAAAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCAGACCACGATACAGCAGCCCTTCATTAGGAACACTGAGTGCTTCTTCACCCAGCTGGCTAGGGGCAGCTCAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AATTATTATTCCCCCATCAATCTTTATCATTCCTCAGATGCCTTCAAACAAGATGAAAGTGTGGACTATGGGCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGTTTTTGTGCAAGAACCAGATGATATTATTTTTCCAACTGATTCTGATGAAAAGAAGGTAGCATTGAATTGTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AAGTTCGTGGCAATCCAGTTCCCAGTTACAGATGGCTTCGAAATGGAACAGAAATAGATCTGGAAAGTGATTAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CGCTACAGTTTGATAGATGGCACCTTCATTATAAGCAATCCAAGTGAAGCAAAGGATTCTGGTCATTATCAGTG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TTTAGCAACCAACACTGTGGGGAGTATTCTTAGTAGAGAAGCTACACTGCAGTTTGCCTATCTGGGAAATTTTA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GTGGCCGGACAAGAAGTGCAGTCTCTGTGAGGGAAGGCCAGGGTGTCGTTCTGATGTGCTCTCCTCCGCCACAT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TCACCAGAGATCATCTATAGCTGGGTATTTAATGAGTTCCCTTCCTTTGTGGCGGAAGACAGCCGGCGGTTCAT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CTCCCAGGAGACAGGCAACCTTTATATTTCTAAAGTCCAAACATCAGATGTTGGCAGCTATATTTGTCTGGTGA 814
Query 1 --------------------------------------------------------------------ATGGGA 6
||||||
Sbjct 815 AAAACACAGTGACGAATGCTAGAGTCCTTAGTCCTCCAACGCCACTCACTCTGCGTAATGATGGTGTGATGGGA 888
Query 7 GAATATGAGCCGAAAATTGAGGTCCATTTTCCTTTCACGGTTACAGCTGCTAAAGGAACAACTGTTAAGATGGA 80
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GAATATGAGCCGAAAATTGAGGTCCATTTTCCTTTCACGGTTACAGCTGCTAAAGGAACAACTGTTAAGATGGA 962
Query 81 ATGCTTTGCACTTGGCAACCCCGTTCCAACAATCACATGGATGAAGGTTAATGGTTATATTCCTAGTAAGGCAC 154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 ATGCTTTGCACTTGGCAACCCCGTTCCAACAATCACATGGATGAAGGTTAATGGTTATATTCCTAGTAAGGCAC 1036
Query 155 GTCTGCGGAAATCTCAGGCGGTGCTGGAAATACCGAATGTACAGCTGGATGATGCAGGCATTTATGAGTGCAGA 228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GTCTGCGGAAATCTCAGGCGGTGCTGGAAATACCGAATGTACAGCTGGATGATGCAGGCATTTATGAGTGCAGA 1110
Query 229 GCTGAAAACTCACGTGGAAAAAATTCCTTTCGTGGACAATTACAAGTATACACCTACCCACACTGGGTAGAAAA 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GCTGAAAACTCACGTGGAAAAAATTCCTTTCGTGGACAATTACAAGTATACACCTACCCACACTGGGTAGAAAA 1184
Query 303 ACTGAATGATACTCAGTTAGACAGTGGGAGCCCTCTCCGATGGGAATGTAAGGCTACTGGAAAACCCAGACCCA 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 ACTGAATGATACTCAGTTAGACAGTGGGAGCCCTCTCCGATGGGAATGTAAGGCTACTGGAAAACCCAGACCCA 1258
Query 377 CGTATCGTTGGCTGAAGAATGGAGTACCCCTCTCACCTCAGAGTAGGGTTGAGATGGTTAATGGAGTATTGATG 450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 CGTATCGTTGGCTGAAGAATGGAGTACCCCTCTCACCTCAGAGTAGGGTTGAGATGGTTAATGGAGTATTGATG 1332
Query 451 ATCCACAATGTGAATCAATCAGATGCTGGAATGTATCAGTGTTTGGCTGAAAATAAGTATGGAGCCATTTACGC 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 ATCCACAATGTGAATCAATCAGATGCTGGAATGTATCAGTGTTTGGCTGAAAATAAGTATGGAGCCATTTACGC 1406
Query 525 TAGTGCTGAGCTGAAGATTCTAGCTTCAGCTCCCACTTTTGCACTGAATCAACTGAAGAAAACAATAATTGTTA 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 TAGTGCTGAGCTGAAGATTCTAGCTTCAGCTCCCACTTTTGCACTGAATCAACTGAAGAAAACAATAATTGTTA 1480
Query 599 CCAAAGACCAAGAAGTTGTCATAGAGTGCAAACCCCAAGGCTCTCCAAAACCAACCATCTCTTGGAAGAAAGGA 672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 CCAAAGACCAAGAAGTTGTCATAGAGTGCAAACCCCAAGGCTCTCCAAAACCAACCATCTCTTGGAAGAAAGGA 1554
Query 673 GACAGAGCAGTTAGAGAAAACAAAAGAATAGCTATTCTTCCAGACGGGAGTCTACGGATCCTAAATGCTTCCAA 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 GACAGAGCAGTTAGAGAAAACAAAAGAATAGCTATTCTTCCAGACGGGAGTCTACGGATCCTAAATGCTTCCAA 1628
Query 747 ATCAGACGAGGGAAAGTACGTTTGCCGAGGGGAAAACGTCTTTGGTTCTGCTGAAATTATAGCTTCGCTATCTG 820
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 ATCAGACGAGGGAAAGTACGTTTGCCGAGGGGAAAACGTCTTTGGTTCTGCTGAAATTATAGCTTCGCTATCTG 1702
Query 821 TAAAAGAACCTACAAGGATAGAACTTACTCCTAAAAGAACAGAATTGACAGTGGGAGAAAGCATTGTCCTTAAT 894
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 TAAAAGAACCTACAAGGATAGAACTTACTCCTAAAAGAACAGAATTGACAGTGGGAGAAAGCATTGTCCTTAAT 1776
Query 895 TGCAAAGCAATTCACGATGCTAGTTTGGATGTCACTTTCTACTGGACTCTGAAAGGACAGCCTATTGATTTCGA 968
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 TGCAAAGCAATTCACGATGCTAGTTTGGATGTCACTTTCTACTGGACTCTGAAAGGACAGCCTATTGATTTCGA 1850
Query 969 GGAAGAGGGTGGACATTTTGAAAGCATCAGGGCCCAAGCATCCTCTGCAGATTTAAT--GATCAGGAACATCCT 1040
|||||||||||||||||||||||||||||||||| |.|| .||||.|| ||| ||||
Sbjct 1851 GGAAGAGGGTGGACATTTTGAAAGCATCAGGGCC---GTAT--------TATTTCATTGGAT--------TCCT 1905
Query 1041 TCTGATGCATGCTGGGAGATATGGCTGCAGGGTACAGACCACAGCAGACAGTGTGTCAGATGAGGCAGAACTTC 1114
||| ||.|| ||.||..|||||
Sbjct 1906 -------------------------------GTA---ACTAC-----ACTGTTAGTCAG--------------- 1925
Query 1115 TTGTTAGGGGACCCCCAGGCCCACCTGGGATAGTAATTGTTGAGGAAATAACCGAAAGTACGGCCACACTGTCC 1188
||| |||.|| |.||||.
Sbjct 1926 --------------CCA--------------AGTTAT--------ATATAAA---------------------- 1941
Query 1189 TGGAGCCCAGCAGCTGACAACCACAGCCCAATCTCCTCCTACAACCTTCAAGCTCGCAGCCCATTTTCCCTGGG 1262
Sbjct 1942 -------------------------------------------------------------------------- 1941
Query 1263 CTGGCAAACAGTAAAGACAGTCCCAGAAATCATAACAGGGGACATGGAGTCAGCCATGGCTGTGGACCTAAATC 1336
Sbjct 1942 -------------------------------------------------------------------------- 1941
Query 1337 CCTGGGTGGAATATGAATTTCGAGTGGTAGCCACCAACCCTATTGGGACAGGAGATCCAAGCACCCCATCTCGA 1410
Sbjct 1942 -------------------------------------------------------------------------- 1941
Query 1411 ATGATCCGCACAAATGAAGCAGTTCCGAAGACAGCACCCACCAATGTAAGCGGAAGAAGTGGAAGAAGGCATGA 1484
Sbjct 1942 -------------------------------------------------------------------------- 1941
Query 1485 GTTAGTCATTGCCTGGGAGCCAGTATCTGAAGAGTTTCAGAATGGGGAAGGCTTCGGCTATATTGTGGCTTTCA 1558
Sbjct 1942 -------------------------------------------------------------------------- 1941
Query 1559 GACCCAATGGAACACGTGGCTGGAAGGAAAAAATGGTGACATCCTCTGAAGCTTCCAAATTCATTTATCGAGAT 1632
Sbjct 1942 -------------------------------------------------------------------------- 1941
Query 1633 GAAAGTGTCCCTCCTCTTACTCCCTTTGAAGTGAAAGTTGGCGTTTATAACAATAAAGGAGATGGGCCTTTTAG 1706
Sbjct 1942 -------------------------------------------------------------------------- 1941
Query 1707 TCAAATTGTGGTCATCTGTTCAGCTGAAGGAGAACCCAGTGCTGCTCCCACAGATGTCAAGGCGACAAGTGTGT 1780
Sbjct 1942 -------------------------------------------------------------------------- 1941
Query 1781 CTGTGTCAGAGATTCTTGTTGCATGGAAACACATTAAAGAGAGTCTAGGAAGACCACAGGGATTTGAGGTA 1851
Sbjct 1942 ----------------------------------------------------------------------- 1941
