Nucleotide Global Alignment

Description

Query:
TRCN0000478064
Subject:
XM_017319143.1
Aligned Length:
1772
Identities:
1360
Gaps:
265

Alignment

Query    1  ATGGGCGCCGCCGCCTCCAGGAGGAGGGCGCTGAGGAGCGAGGCCATGTCCTCGGTGGCGGCCAAAGTGCGAGC  74
            |||||.||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||..||||
Sbjct    1  ATGGGTGCCGCCGCCTCCAGGAGGAGGGCGCTGAGGAGCGAGGCCATGTCCTCGGTAGCGGCCAAAGTAAGAGC  74

Query   75  AGCCCGAGCGTTTGGAGAGTACCTGTCCCAGAGTCACCCTGAGAACCGCAACGGCGCAGATCACCTGCTGGCTG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||.|||||||||||||
Sbjct   75  AGCCCGAGCGTTTGGAGAGTACCTGTCCCAGAGTCACCCTGAGAACCGCAACGGTGCAGACCACCTGCTGGCTG  148

Query  149  ATGCCTACTCTGGCCACGACGGGTCCCCCGAGATGCAGCCGGCCCCCCAGAACAAGCGCCGCCTGTCCCTCGTC  222
            |.||||||||||||||||||||||||||.||||||||.||.||.||||||||||||||||||||.|||||||||
Sbjct  149  ACGCCTACTCTGGCCACGACGGGTCCCCAGAGATGCAACCTGCACCCCAGAACAAGCGCCGCCTCTCCCTCGTC  222

Query  223  TCCAACGGCTGCTACGAGGGCAGCCTCTCAGAGGAGCC---CAGCATTAGGAAGCCCGCAGGC----GAGGGCC  289
            |||||.|||.|.||.|||||||||.|||||||.|||.|   ||||   .|||||||    |||    |||||||
Sbjct  223  TCCAATGGCCGATATGAGGGCAGCATCTCAGATGAGGCAGTCAGC---GGGAAGCC----GGCTATAGAGGGCC  289

Query  290  CTCAGCCTCGAGTGTACACCATCTCTGGGGAGCCTGCCCTGCTGCCCAGCCCTGAGGCGGAGGCCATTGAGCTG  363
            |.|||||.|..|||||||||||||||.|.|||||.||||||||.||..||.||||.||.||.|||||||||||.
Sbjct  290  CCCAGCCCCACGTGTACACCATCTCTAGAGAGCCCGCCCTGCTACCTGGCTCTGAAGCTGAAGCCATTGAGCTA  363

Query  364  GCGGTGGTGAAGGGG------CGGCGGCAGCGGCACCCTCACCATCACAGCCAGCCCCTGCGCGCCAGCCCTGG  431
            ||.|||||.||.|||      |.||||.|.||||||||||||||.|||||||||||||||||.||||||||.||
Sbjct  364  GCAGTGGTAAAAGGGAGGAGACAGCGGGAACGGCACCCTCACCACCACAGCCAGCCCCTGCGTGCCAGCCCAGG  437

Query  432  TGGCAGCCGGGAGGACGTCAGCAGGCCCTGCCAGAGCTGGGCGGGCAGCCGCCAGGGCTCCAAGGAGTGCCCCG  505
            ..||||||||||||||.||||||||||||||||.||||||||.||.|||||||||||||||||.||||||||.|
Sbjct  438  CAGCAGCCGGGAGGACATCAGCAGGCCCTGCCAAAGCTGGGCAGGAAGCCGCCAGGGCTCCAAAGAGTGCCCAG  511

Query  506  GATGTGCCCAGCTGGCTCCTGGCCCCACCCCTCGGGCCTTTGGGCTGGACCAGCCACCTCTGCCTGAGACCTCC  579
            |||||||||||||||..|||||.|||.|..|||||||||||||||||||.|||||||||||.|||||| .||||
Sbjct  512  GATGTGCCCAGCTGGTCCCTGGTCCCTCTTCTCGGGCCTTTGGGCTGGAGCAGCCACCTCTACCTGAG-GCTCC  584

Query  580  -GGTCGCCGCAAGAAGCTGGAGAGGATGTACAGCGTTGACCGTGTGTCTGACGACATCCCTATTCGTACCTGGT  652
             ||.||||.||||||||||||.||||||||.||||||||..|.||||||||.||..||||.||.||||||||||
Sbjct  585  TGGCCGCCACAAGAAGCTGGAAAGGATGTATAGCGTTGATGGAGTGTCTGATGATGTCCCCATCCGTACCTGGT  658

Query  653  TCCCCAAGGAAAATCTTTTCAGCTTCCAGACAGCAACCACAACTATGCAAGCGGTGTTCAGGGGCTACGCGGAG  726
            |||||||||||||.|||||||||||||||||.||||||||||||||||||||                      
Sbjct  659  TCCCCAAGGAAAACCTTTTCAGCTTCCAGACGGCAACCACAACTATGCAAGC----------------------  710

Query  727  AGGAAGCGCCGGAAACGGGAGAATGATTCCGCGTCTGTAATCCAGAGGAACTTCCGCAAACACCTGCGCATGGT  800
                                                           |||||||||||||||||||||||||||
Sbjct  711  -----------------------------------------------GAACTTCCGCAAACACCTGCGCATGGT  737

Query  801  CGGCAGCCGGAGGGTGAAGGCCCAGACGTTCGCTGAGCGGCGCGAGCGGAGCTTCAGCCGGTCCTGGAGCGACC  874
            .|||||.|||.||||||||||||||||||||||||||||.|||||.||||||||||||||||||||||||||||
Sbjct  738  TGGCAGTCGGCGGGTGAAGGCCCAGACGTTCGCTGAGCGTCGCGAACGGAGCTTCAGCCGGTCCTGGAGCGACC  811

Query  875  CCACCCCCATGAAAGCCGACACTTCCCACGACTCCCGAGACAGCAGTGACCTGCAGAGCTCCCACTGCACGCTG  948
            |||||||.||||||||||||||||||||||||||||||||||||||||||||.||||||||.||||||||.|||
Sbjct  812  CCACCCCTATGAAAGCCGACACTTCCCACGACTCCCGAGACAGCAGTGACCTACAGAGCTCACACTGCACCCTG  885

Query  949  GACGAGGCCTTCGAGGACCTGGACTGGGACACTGAGAAGGGCCTGGAGGCTGTGGCCTGCGACACCGAAGGCTT  1022
            ||.|||||.|..||||||||||||||||||||.|||||.||.||||||||..||||||||.|||||||.|||||
Sbjct  886  GATGAGGCTTGTGAGGACCTGGACTGGGACACAGAGAAAGGTCTGGAGGCCATGGCCTGCAACACCGAGGGCTT  959

Query 1023  CGTGCCACCAAAGGTCATGCTCATTTCCTCCAAGGTGCCCAAGGCTGAGTACATCCCCACTATCATCCGCCGGG  1096
            |.|||||||.||||||||||||||.||||||||||||||.|||||.|||||.|||||.||||||||||||.|.|
Sbjct  960  CTTGCCACCCAAGGTCATGCTCATCTCCTCCAAGGTGCCAAAGGCCGAGTATATCCCTACTATCATCCGCAGAG  1033

Query 1097  ATGACCCCTCCATCATCCCCATCCTCTACGACCATGAGCACGCAACCTTCGAGGACATCCTTGAGGAGATAGAG  1170
            |||||||.||||||||.|||||||||||||||||.|||||.||||||||||||||||||||.|||||.||||||
Sbjct 1034  ATGACCCGTCCATCATTCCCATCCTCTACGACCACGAGCATGCAACCTTCGAGGACATCCTGGAGGAAATAGAG  1107

Query 1171  AGGAAGCTGAACGTCTACCACAAGGGAGCCAAGATCTGGAAAATGCTGATTTTCTGC-----------------  1227
            |.|||..|||||.||||.||||||||.||||||||||||||.|||||||||||||||                 
Sbjct 1108  AAGAAATTGAACATCTATCACAAGGGGGCCAAGATCTGGAAGATGCTGATTTTCTGCCAGGTAGAAGCAGCCTT  1181

Query 1228  --------------------------------------------------------------------------  1227
                                                                                      
Sbjct 1182  TCCTTTCCTCCCCAGGAAAAGAGGGCAGTGTGGTATGGGTAGGGCCCCAAGATCTTACTCAGTGTGGGCGTGTC  1255

Query 1228  --------------------------------------------------------------------------  1227
                                                                                      
Sbjct 1256  CATGTGGTACATTTGTGGACGACATGCACACGCCTCATCCTAGCCTCCCCCTAGCACTCCTGAGGCCTGACCGT  1329

Query 1228  ---------CAGGGAGGTCCTGGACACCTCTATCTCCTCAAGAACAAGGTGGCCACCTTTGCCAAAGTGGAGAA  1292
                     |||||.||.|||||||||||.|||.|.||||||||||||||||||||||||||||||||||||||
Sbjct 1330  GACCTCTTTCAGGGCGGCCCTGGACACCTTTATTTGCTCAAGAACAAGGTGGCCACCTTTGCCAAAGTGGAGAA  1403

Query 1293  GGAAGAGGACATGATTCACTTCTGGAAGCGGCTGAGCCGCCTGATGAGCAAAGTGAACCCAGAGCCGAACGTCA  1366
            |||||||||||||||.||||||||||||.||||||||||||||||||||||.||||||||.||||||||.||||
Sbjct 1404  GGAAGAGGACATGATCCACTTCTGGAAGAGGCTGAGCCGCCTGATGAGCAAGGTGAACCCCGAGCCGAATGTCA  1477

Query 1367  TCCACATCATGGGCTGCTACATTCTGGGGAACCCCAATGGAGAGAAGCTGTTCCAGAACCTCAGGACCCTCATG  1440
            ||||||||||||||||||||||||||||||||||.||.||.||||||||.||||||||||||||||||||||||
Sbjct 1478  TCCACATCATGGGCTGCTACATTCTGGGGAACCCTAACGGGGAGAAGCTATTCCAGAACCTCAGGACCCTCATG  1551

Query 1441  ACTCCTTATAGGGTCACCTTCGAGTCACCCCTGGAGCTCTCAGCCCAAGGGAAGCAGATGATCGAGACGTACTT  1514
            ||.|||||.|.|||.|||||.|||||.||.||.|||||.||.||||||||||||||||||||.|||||.|||||
Sbjct 1552  ACCCCTTACAAGGTTACCTTTGAGTCGCCTCTCGAGCTGTCTGCCCAAGGGAAGCAGATGATTGAGACCTACTT  1625

Query 1515  TGACTTCCGGTTGTATCGCCTGTGGAAGAGCCGCCAGCACTCGAAGCTGCTGGACTTTGACGACGTCCTG  1584
            ||||||||||.||||.||||||||||||||||||||||||||.|||||||||||||||||.|||||||||
Sbjct 1626  TGACTTCCGGCTGTACCGCCTGTGGAAGAGCCGCCAGCACTCAAAGCTGCTGGACTTTGATGACGTCCTG  1695

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