Nucleotide Global Alignment

Description

Query:
TRCN0000478143
Subject:
XM_011514855.2
Aligned Length:
1767
Identities:
1499
Gaps:
246

Alignment

Query    1  ATGGAGAGCTTGGGGCTGCACACGGTGACCCTTAGTGATGGGACAACAGCCTACGTCCAGCAAGCTGTCAAAGG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  AGAGAAGCTTCTTGAAGGGCAGGTGATCCAGCTCGAGGATGGGACCACCGCATACATTCACCAGGTGACGGTAC  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  AGAAAGAAGCTCTCTCCTTTGAGGATGGTCAGCCTGTGCAGCTGGAAGATGGCAGCATGGCTTACATACACCGC  222
                                    ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ------------------------ATGGTCAGCCTGTGCAGCTGGAAGATGGCAGCATGGCTTACATACACCGC  50

Query  223  ACACCCAGAGAAGGCTATGACCCCAGCACCCTGGAAGCCGTCCAACTGGAAGATGGCTCCACTGCCTACATTCA  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   51  ACACCCAGAGAAGGCTATGACCCCAGCACCCTGGAAGCCGTCCAACTGGAAGATGGCTCCACTGCCTACATTCA  124

Query  297  CCACCCTGTGGCTGTGCCATCGGAGAGCACCATCCTGGCCGTACAGACAGAGGTGGGCTTGGAGGACCTGGCAG  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  125  CCACCCTGTGGCTGTGCCATCGGAGAGCACCATCCTGGCCGTACAGACAGAGGTGGGCTTGGAGGACCTGGCAG  198

Query  371  CAGAGGATGATGAGGGCTTCAGTGCAGACGCAGTGGTGGCCCTGGAGCAGTATGCCAGCA-------------A  431
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||             |
Sbjct  199  CAGAGGATGATGAGGGCTTCAGTGCAGACGCAGTGGTGGCCCTGGAGCAGTATGCCAGCAAGACTTTTCCCCCA  272

Query  432  GGTTCTTCATGACAGCCAGATTCCCCGTAATGGAAAAGGGCAGCAAGTTGGAGACAGAGCATTCCGCTGTGGCT  505
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  273  GGTTCTTCATGACAGCCAGATTCCCCGTAATGGAAAAGGGCAGCAAGTTGGAGACAGAGCATTCCGCTGTGGCT  346

Query  506  ACAAGGGCTGTGGGCGTCTCTACACCACCGCTCATCACTTAAAGGTGCATGAACGAGCTCATACAGGTGACCGT  579
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  347  ACAAGGGCTGTGGGCGTCTCTACACCACCGCTCATCACTTAAAGGTGCATGAACGAGCTCATACAGGTGACCGT  420

Query  580  CCATACAGATGTGACTTCCCCAGCTGTGGAAAGGCCTTTGCCACAGGCTATGGACTGAAGAGCCACGTTCGTAC  653
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  421  CCATACAGATGTGACTTCCCCAGCTGTGGAAAGGCCTTTGCCACAGGCTATGGACTGAAGAGCCACGTTCGTAC  494

Query  654  CCACACTGGTGAGAAACCATACAAGTGCCCAGAGGAGCTGTGCAGCAAGGCCTTCAAGACCTCAGGAGACCTGC  727
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  495  CCACACTGGTGAGAAACCATACAAGTGCCCAGAGGAGCTGTGCAGCAAGGCCTTCAAGACCTCAGGAGACCTGC  568

Query  728  AGAAGCATGTCCGTACCCACACTGGTGAACGCCCGTTCCAGTGCCCTTTTGAGGGCTGTGGCCGCTCCTTCACC  801
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  569  AGAAGCATGTCCGTACCCACACTGGTGAACGCCCGTTCCAGTGCCCTTTTGAGGGCTGTGGCCGCTCCTTCACC  642

Query  802  ACATCTAACATCCGCAAGGTACATGTGCGCACCCACACAGGCGAGAGGCCCTACACCTGCCCGGAGCCCCACTG  875
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  643  ACATCTAACATCCGCAAGGTACATGTGCGCACCCACACAGGCGAGAGGCCCTACACCTGCCCGGAGCCCCACTG  716

Query  876  TGGCCGCGGCTTCACCAGCGCCACCAACTATAAGAATCACGTGCGCATCCACACAGGGGAGAAGCCATACGTTT  949
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  717  TGGCCGCGGCTTCACCAGCGCCACCAACTATAAGAATCACGTGCGCATCCACACAGGGGAGAAGCCATACGTTT  790

Query  950  GCACGGTGCCAGGCTGCGGGAAACGCTTCACCGAGTACTCGAGCTTGTATAAGCACCACGTGGTGCACACACAC  1023
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  791  GCACGGTGCCAGGCTGCGGGAAACGCTTCACCGAGTACTCGAGCTTGTATAAGCACCACGTGGTGCACACACAC  864

Query 1024  TGCAAGCCCTACACCTGCAGCACCTGCGGCAAGACCTACCGGCAGACCTCCACCTTGGCCATGCACAAGCGCAG  1097
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  865  TGCAAGCCCTACACCTGCAGCACCTGCGGCAAGACCTACCGGCAGACCTCCACCTTGGCCATGCACAAGCGCAG  938

Query 1098  TGCCCATGGCGAGCTGGAGGCCACGGAGGAGAGTGAGCAGGCCCTCTATGAGCAGCAGCAACTTGAGGCCGCCT  1171
            ||||||.||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||
Sbjct  939  TGCCCACGGCGAGCTGGAGGCCACGGAGGAGAGCGAGCAGGCCCTCTATGAGCAGCAGCAACTTGAGGCCGCCT  1012

Query 1172  CTGCAGCCGAGGAGAGTCCGCCACCCAAACGACCCCGGATAGCTTACCTTTCGGAGGTGAAGGAAGAGAGAGAT  1245
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1013  CTGCAGCCGAGGAGAGTCCGCCACCCAAACGACCCCGGATAGCTTACCTTTCGGAGGTGAAGGAAGAGAGAGAT  1086

Query 1246  GACATCCCAGCCCAGGTGGCGATGGTGACTGAAGAAGATGGGGCCCCCCAGGTGGCTCTGATCACTCAGGATGG  1319
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1087  GACATCCCAGCCCAGGTGGCGATGGTGACTGAAGAAGATGGGGCCCCCCAGGTGGCTCTGATCACTCAGGATGG  1160

Query 1320  TGCCCAGCAGGTCAGCCTGTCCCCGGAAGACCTGCAGGCCCTGGGGAGTGCCATCAGTATGGTCACCCAGCACG  1393
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1161  TGCCCAGCAGGTCAGCCTGTCCCCGGAAGACCTGCAGGCCCTGGGGAGTGCCATCAGTATGGTCACCCAGCACG  1234

Query 1394  GCAGCACCACCCTCACCATCCCCAGTCCTGATGCCGACCTGGCCACATCTGGCACACATACAGTCACCATGGTC  1467
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1235  GCAGCACCACCCTCACCATCCCCAGTCCTGATGCCGACCTGGCCACATCTGGCACACATACAGTCACCATGGTC  1308

Query 1468  AGCGCCGATGGCACCCAGACGCAGCCCGTCACAATCATTACCTCTGGGGCTGTGGTGGCTGAGGACTCAAGTGT  1541
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1309  AGCGCCGATGGCACCCAGACGCAGCCCGTCACAATCATTACCTCTGGGGCTGTGGTGGCTGAGGACTCAAGTGT  1382

Query 1542  AGCATCTCTTCGTCATCAACAGGTGGCACTGTTGGCCACAGCCAACGGAACGCACATTGCAGTGCAGCTGGAGG  1615
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||| .
Sbjct 1383  AGCATCTCTTCGTCATCAACAGGTGGCACTGTTGGCCACAGCCAACGGAACGCACATTGCAGTGCA---GGA-T  1452

Query 1616  AAC------AGCAG---ACCTTAGAGG---AGGC----CATCAATGTG-GCCACTG----------CGGCCATG  1662
            |||      .||||   ||||  |.||   |.||    |||||.|.|| |.|.|||          .||..|||
Sbjct 1453  AACTCCGATGGCAGTCCACCT--GTGGTCCAAGCCCTTCATCATTTTGTGTCTCTGTTTCTTCATCTGGAAATG  1524

Query 1663  CAGCAAGG-GGCTG-------TGACCCTGGAGACAACAGT----GTCGGAGAGTGGCTGC-----  1710
                |||| |||||       |||.|      ||.||.||    .||.|..||| .||.|     
Sbjct 1525  ----AAGGAGGCTGACGTAGATGATC------ACCACGGTTCTCTTCAGCCAGT-CCTTCCTCCG  1578

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