Nucleotide Global Alignment
Description
- Query:
- TRCN0000478143
- Subject:
- XR_001743628.1
- Aligned Length:
- 2813
- Identities:
- 1543
- Gaps:
- 1268
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTCGCTGGCCATGCGTCACCCCGGCCTTGGTGGGGGCGGGGCTCCGAAGAGCTCGGTTCAGATCCCGGCCGCCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGGCTCCAGGAGCCCCGGAACCAGGATAAGTTGGATGGCTGCCGCGGCGAAGCGGGGGGCGGGGTGGACCGTGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCGGTATTTTCTATACGGGTTCCGGGGCCCGGTAGAGGCGCGCCAAGAGGAAAGGAAAGTGCGGCGGCCCTGGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ACCTGGATATCGCGCGAGATTTGTGACCCAGAAGGAAATCTCTGACCTCAGCTGTGGCTCTTGGTGCTGGCCAG 296
Query 1 ----------------------------------------ATGGAGAGCTTGGGGCTGCACACGGTGACCCTTA 34
||||||||||||||||||||||||||||||||||
Sbjct 297 AAGCCAACTTCATGTCTGAGTGCACGAGCAGCAGTTTGCCATGGAGAGCTTGGGGCTGCACACGGTGACCCTTA 370
Query 35 GTGATGGGACAACAGCCTACGTCCAGCAAGCTGTCAAAGGAGAGAAGCTTCTTGAAGGGCAGGTGATCCAGCTC 108
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GTGATGGGACAACAGCCTACGTCCAGCAAGCTGTCAAAGGAGAGAAGCTTCTTGAAGGGCAGGTGATCCAGCTC 444
Query 109 GAGGATGGGACCACCGCATACATTCACCAGGTGACGGTACAGAAAGAAGCTCTCTCCTTTGAGGATGGTCAGCC 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GAGGATGGGACCACCGCATACATTCACCAGGTGACGGTACAGAAAGAAGCTCTCTCCTTTGAGGATGGTCAGCC 518
Query 183 TGTGCAGCTGGAAGATGGCAGCATGGCTTACATACACCGCACACCCAGAGAAGGCTATGACCCCAGCACCCTGG 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TGTGCAGCTGGAAGATGGCAGCATGGCTTACATACACCGCACACCCAGAGAAGGCTATGACCCCAGCACCCTGG 592
Query 257 AAGCCGTCCAACTGGAAGATGGCTCCACTGCCTACATTCACCACCCTGTGGCTGTGCCATCGGAGAGCACCATC 330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AAGCCGTCCAACTGGAAGATGGCTCCACTGCCTACATTCACCACCCTGTGGCTGTGCCATCGGAGAGCACCATC 666
Query 331 CTGGCCGTACAGACAGAGGTGGGCTTGGAGGACCTGGCAGCAGAGGATGATGAGGGCTTCAGTGCAGACGCAGT 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CTGGCCGTACAGACAGAGGTGGGCTTGGAGGACCTGGCAGCAGAGGATGATGAGGGCTTCAGTGCAGACGCAGT 740
Query 405 GGTGGCCCTGGAGCAGTATGCCAGCA-------------AGGTTCTTCATGACAGCCAGATTCCCCGTAATGGA 465
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 741 GGTGGCCCTGGAGCAGTATGCCAGCAAGACTTTTCCCCCAGGTTCTTCATGACAGCCAGATTCCCCGTAATGGA 814
Query 466 AAAGGGCAGCAAGTTGGAGACAGAGCATTCCGCTGTGGCTACAAGGGCTGTGGGCGTCTCTACACCACCGCTCA 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AAAGGGCAGCAAGTTGGAGACAGAGCATTCCGCTGTGGCTACAAGGGCTGTGGGCGTCTCTACACCACCGCTCA 888
Query 540 TCACTTAAAGGTGCATGAACGAGCTCATACAGGTGACCGTCCATACAGATGTGACTTCCCCAGCTGTGGAAAGG 613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TCACTTAAAGGTGCATGAACGAGCTCATACAGGTGACCGTCCATACAGATGTGACTTCCCCAGCTGTGGAAAGG 962
Query 614 CCTTTGCCACAGGCTATGGACTGAAGAGCCACGTTCGTACCCACACTGGTGAGAAACCATACAAGTGCCCAGAG 687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CCTTTGCCACAGGCTATGGACTGAAGAGCCACGTTCGTACCCACACTGGTGAGAAACCATACAAGTGCCCAGAG 1036
Query 688 GAGCTGTGCAGCAAGGCCTTCAAGACCTCAGGAGACCTGCAGAAGCATGTCCGTACCCACACTGGTGAACGCCC 761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GAGCTGTGCAGCAAGGCCTTCAAGACCTCAGGAGACCTGCAGAAGCATGTCCGTACCCACACTGGTGAACGCCC 1110
Query 762 GTTCCAGTGCCCTTTTGAGGGCTGTGGCCGCTCCTTCACCACATCTAACATCCGCAAGGTACATGTGCGCACCC 835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GTTCCAGTGCCCTTTTGAGGGCTGTGGCCGCTCCTTCACCACATCTAACATCCGCAAGGTACATGTGCGCACCC 1184
Query 836 ACACAGGCGAGAGGCCCTACACCTGCCCGGAGCCCCACTGTGGCCGCGGCTTCACCAGCGCCACCAACTATAAG 909
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 ACACAGGCGAGAGGCCCTACACCTGCCCGGAGCCCCACTGTGGCCGCGGCTTCACCAGCGCCACCAACTATAAG 1258
Query 910 AATCACGTGCGCATCCACA--------------CAGGGGAGAAGCCATACGTTTGCACGGTGCCAGGCTGCGGG 969
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 AATCACGTGCGCATCCACACAGCCCAGTGTCCCCAGGGGAGAAGCCATACGTTTGCACGGTGCCAGGCTGCGGG 1332
Query 970 AAACGCTTCACCGAGTACTCGAGCTTGTATAAGCACCACGTGGTGCACACACACTGCAAGCCCTACACCTGCAG 1043
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 AAACGCTTCACCGAGTACTCGAGCTTGTATAAGCACCACGTGGTGCACACACACTGCAAGCCCTACACCTGCAG 1406
Query 1044 CACCTGCGGCAAGACCTACCGGCAGACCTCCACCTTGGCCATGCACAAGCGCAGTGCCCATGGCGAGCTGGAGG 1117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||
Sbjct 1407 CACCTGCGGCAAGACCTACCGGCAGACCTCCACCTTGGCCATGCACAAGCGCAGTGCCCACGGCGAGCTGGAGG 1480
Query 1118 CCACGGAGGAGAGTGAGCAGGCCCTCTATGAGCAGCAGCAACTTGAGGCCGCCTCTGCAGCCGAGGAGAGTCCG 1191
|||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 CCACGGAGGAGAGCGAGCAGGCCCTCTATGAGCAGCAGCAACTTGAGGCCGCCTCTGCAGCCGAGGAGAGTCCG 1554
Query 1192 CCACCCAAACGACCCCGGATAGCTTACCTTTCGGAGGTGAAGGAAGAGAGAGATGACATCCCAGCCCAGGTGGC 1265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 CCACCCAAACGACCCCGGATAGCTTACCTTTCGGAGGTGAAGGAAGAGAGAGATGACATCCCAGCCCAGGTGGC 1628
Query 1266 GATGGTGACTGAAGAAGATGGGGCCCCCCAGGTGGCTCTGATCACTCAGGATGGTGCCCAGCAGGTCAGCCTGT 1339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 GATGGTGACTGAAGAAGATGGGGCCCCCCAGGTGGCTCTGATCACTCAGGATGGTGCCCAGCAG---------- 1692
Query 1340 CCCCGGAAGACCTGCAGGCCCTGGGGAGTGCCATCAGTATGGTCACCCAGCACGGCAGCACCACCCTCACCATC 1413
Sbjct 1693 -------------------------------------------------------------------------- 1692
Query 1414 CCCAGTCCTGATGCCGACCTGGCCACATCTGGCACACATACAGTCACCATGGTCAGCGCCGATGGCACCCAGAC 1487
Sbjct 1693 -------------------------------------------------------------------------- 1692
Query 1488 GCAGCCCGTCACAATCATTACCTCTGGGGCTGTGGTGGCTGAGGACTCAAGTGTAGCATCTCTTCGTCATCAAC 1561
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1693 -------GTCACAATCATTACCTCTGGGGCTGTGGTGGCTGAGGACTCAAGTGTAGCATCTCTTCGTCATCAAC 1759
Query 1562 AGGTGGCACTGTTGGCCACAGCCAACGGAACGCACATTGCAGTGCAGCTGGAGGAACAGCAGACCTTAGAGGAG 1635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1760 AGGTGGCACTGTTGGCCACAGCCAACGGAACGCACATTGCAGTGCAGCTGGAGGAACAGCAGACCTTAGAGGAG 1833
Query 1636 GCCATCAATGTGGCCACTGCGGCCATGCAGCAAGGGGCTGTGACCCTGGAGACAACAGTGTCGGAGAGTGGCTG 1709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1834 GCCATCAATGTGGCCACTGCGGCCATGCAGCAAGGGGCTGTGACCCTGGAGACAACAGTGTCGGAGAGTGGCTG 1907
Query 1710 C------------------------------------------------------------------------- 1710
|
Sbjct 1908 CTGAGTCCAAGAGGGCTGGGTCCCACACCATGCTGGAGGAAGTGCCATCTGCATGGCCACTCTTGCCCCCAAGG 1981
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 1982 GCCCAGGCTGTGGCTGACACATAGAAGGTGGCCACATAGGTCTCTGGGGTGAGAAGACAGCAAGAAAACTGCCT 2055
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 2056 AACTGAAGGGAATGGGGGCCCTGCTCAAGAAGGGGGCCAGGCAGCTGGAATCAGGGGAGTGCATCATCCTCGGG 2129
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 2130 AGCTGACAACAGCCAGGCTACACCAGGGCACCCGCCTCTCAAAATCAGCTGGGCGCCCACTCTCCTCCTAAAGA 2203
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 2204 ACACCCTTCTGGCCCTCAGTCTGTTCCCCTTCTCAGGTAGAGATTGGGGCTGCTATGGGGACTGGCCCTGTAGG 2277
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 2278 GTTGAGCCACAGACAGCTCTTCAGCCCAGTAGCAGTGGAGCAGGCCCTGTCCTGCCCTCCCAGCAATAACCACC 2351
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 2352 TCCCTGGAGGCCAGCTGAGATGCCTGGCTACTTGGCACCAGGGACTTCCTGACACCACAGTCAATTAATTCCTC 2425
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 2426 AGGGGCCTGTGGCTGAAGAAAAGGTGCCCAGCCCCCACCACTCCTCAGCTGCCCCCCAACCTCTCTATGGCAGA 2499
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 2500 GAGGCAGGGAGTGGCCCTGTACATAGACTGCTGGGGATTGGGTTTGATTTGTTTTGTTTTTTTTAATTCCATTT 2573
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 2574 TGATAATTTTTTTCCTGCTCTGGGTGGTGGTGGCACATGGATGAATGAGTATTTAATAAAAGTTCCAAATTTCC 2647
Query 1711 - 1710
Sbjct 2648 A 2648
