Nucleotide Global Alignment
Description
- Query:
- TRCN0000478143
- Subject:
- XR_385316.3
- Aligned Length:
- 3092
- Identities:
- 1520
- Gaps:
- 1391
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCAGAGATGACTGTCGGGACGCCATCCCTTGGGGCGCCGTTGCACAGGGCGCTGGGAGGACTGTCCCTCGGAGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCCATCCCCTCCAGGCGTCTGGTCACCGTCCTCTGCAGGAACCACCTAGAGATACCTGCAATGGCTTCCTCCCG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGCAGCCCACCGCCGCTCGATTTTTTCCCCCGTTGCTATGGCGACCGCGGCTTCCACCCGGCGTCGTGACGTCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCACGCCCTCCCCGGGCGCCCGGGCTGGCGAGGCCGCGTCACCCGGCGGCCAGCGGAGAGAAGAGCGAGGCGGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCTCCGAGGCTCGCCTGAGGAGACTCGGCGGCCTGGGCTCCGGGGCCCGGGAACCGGGATAAGCAGGCCGGCCG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCGCGGCGGAGGGGGGCGGGCTGGAGCGTGGCCCCGCGCTGGTCATCCGGGTTCCGGGGCCCGGCGGAGGCCGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCCGGGAGCGAGAGGGAAGTGCGGCCGCCCTGGAACCTGGATATCGCGCGAGGCAAGCCGCGCGCGGGCGGGCT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ATGGCGCAGGCGGGTTGCGGGGCCGGCGCTGGTGGCAGGGCCCGGTGCATGGTGGTCTGTCGGCGGAGTCGCCC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCGGGGGCTGTCAGATTGGTGACCCAGAAGGAAATCTGTGACCTCAGTGGTGACCAGAAGCCAACTTCATGTCT 666
Query 1 -----------------------ATGGAGAGCTTGGGGCTGCACACGGTGACCCTTAGTGATGGGACAACAGCC 51
|||||.|||.||||||||||.|||||||..||.||||||||||||||||||
Sbjct 667 GAAGGCACAAGTGGCAGTTTGTCATGGAAAGCCTGGGGCTGCAAACGGTGAGGCTCAGTGATGGGACAACAGCC 740
Query 52 TACGTCCAGCAAGCTGTCAAAGGAGAGAAGCTTCTTGAAGGGCAGGTGATCCAGCTCGAGGATGGGACCACCGC 125
|||||||||||.|||||||||||.||||||||.|||||||||||.|||||||||||.|||||.||||||||.||
Sbjct 741 TACGTCCAGCAGGCTGTCAAAGGGGAGAAGCTGCTTGAAGGGCAAGTGATCCAGCTGGAGGACGGGACCACTGC 814
Query 126 ATACATTCACCAGGTGACGGTACAGAAAGAAGCTCTCTCCTTTGAGGATGGTCAGCCTGTGCAGCTGGAAGATG 199
.||||||||||||||||||.||||||||||..||.||||||||||.|||||||||||.||||||||||||||.|
Sbjct 815 GTACATTCACCAGGTGACGATACAGAAAGAGTCTTTCTCCTTTGAAGATGGTCAGCCCGTGCAGCTGGAAGACG 888
Query 200 GCAGCATGGCTTACATACACCGCACACCCAGAGAAGGCTATGACCCCAGCACCCTGGAAGCCGTCCAACTGGAA 273
||||||||||.||||||||||.||||||||.|||.||||.||||||||||.||||||||||.|||||.||||||
Sbjct 889 GCAGCATGGCCTACATACACCACACACCCAAAGAGGGCTGTGACCCCAGCGCCCTGGAAGCTGTCCAGCTGGAA 962
Query 274 GATGGCTCCACTGCCTACATTCACCACCCTGTGGCTGTGCCATCGGAGAGCACCATCCTGGCCGTACAGACAGA 347
||.||.||||||||||||||.||.|||||||||.|||||||.|||||.|||.||||||||||.||.|||||.||
Sbjct 963 GACGGTTCCACTGCCTACATCCATCACCCTGTGCCTGTGCCGTCGGACAGCGCCATCCTGGCTGTGCAGACGGA 1036
Query 348 GGTGGGCTTGGAGGACCTGGCAGCAGAGGATGATGAGGGCTTCAGTGCAGACGCAGTGGTGGCCCTGGAGCAGT 421
||.|||||||||||||||||||||.||.||.||.||.||||||.|..|.|||.|||||||||||||||||||||
Sbjct 1037 GGCGGGCTTGGAGGACCTGGCAGCGGAAGACGAGGAAGGCTTCGGCACGGACACAGTGGTGGCCCTGGAGCAGT 1110
Query 422 ATGCCAGCAAGGTTCTTCATGACAG-CCAGATTCCC-CGTAATGGAAAAGGGCAGCAAGTTGGAGACAGAGCAT 493
||||||||||||||||.||.||.|| ||.|.||||| | |||||.|||||||||||.|||||||||.||||.|
Sbjct 1111 ATGCCAGCAAGGTTCTGCACGATAGCCCTGCTTCCCAC--AATGGCAAAGGGCAGCAGGTTGGAGACCGAGCTT 1182
Query 494 TCCGCTGTGGCTACAAGGGCTGTGGGCGTCTCTACACCACCGCTCATCACTTAAAGGTGCATGAACGAGCTCAT 567
|||||||||||||||||||||||||.||||||||||||||.||.||||||||||||||.||.|||||||||||.
Sbjct 1183 TCCGCTGTGGCTACAAGGGCTGTGGTCGTCTCTACACCACTGCCCATCACTTAAAGGTCCACGAACGAGCTCAC 1256
Query 568 ACAGGTGACCGTCCATACAGATGTGACTTCCCCAGCTGTGGAAAGGCCTTTGCCACAGGCTATGGACTGAAGAG 641
|||||.|||||.||||||||.||||||||.|||||||||||||||||||||||.|||||||||||.||.||.||
Sbjct 1257 ACAGGGGACCGCCCATACAGGTGTGACTTTCCCAGCTGTGGAAAGGCCTTTGCAACAGGCTATGGGCTAAAAAG 1330
Query 642 CCACGTTCGTACCCACACTGGTGAGAAACCATACAAGTGCCCAGAGGAGCTGTGCAGCAAGGCCTTCAAGACCT 715
.||.||||||||.|||||.|||||||||||||||||||||||||||||||||||||||||.|||||||||||||
Sbjct 1331 TCATGTTCGTACTCACACGGGTGAGAAACCATACAAGTGCCCAGAGGAGCTGTGCAGCAAAGCCTTCAAGACCT 1404
Query 716 CAGGAGACCTGCAGAAGCATGTCCGTACCCACACTGGTGAACGCCCGTTCCAGTGCCCTTTTGAGGGCTGTGGC 789
||||.|||||||||||.||.||.||.||||||||.|||||.|||||.||||.||||||||||||||||||||||
Sbjct 1405 CAGGGGACCTGCAGAAACACGTGCGGACCCACACAGGTGAGCGCCCATTCCGGTGCCCTTTTGAGGGCTGTGGC 1478
Query 790 CGCTCCTTCACCACATCTAACATCCGCAAGGTACATGTGCGCACCCACACAGGCGAGAGGCCCTACACCTGCCC 863
|||||||||||||||||.||.||||||||||||||||||||||||||||||||||||.||||||||||||||||
Sbjct 1479 CGCTCCTTCACCACATCAAATATCCGCAAGGTACATGTGCGCACCCACACAGGCGAGCGGCCCTACACCTGCCC 1552
Query 864 GGAGCCCCACTGTGGCCGCGGCTTCACCAGCGCCACCAACTATAAGAATCACGTGCGCATCCACACAGGGGAGA 937
.||||||||||||||.||.|||||||||||||||||||||||.||||||||.|||||||||||.||||||||||
Sbjct 1553 CGAGCCCCACTGTGGTCGTGGCTTCACCAGCGCCACCAACTACAAGAATCATGTGCGCATCCATACAGGGGAGA 1626
Query 938 AGCCATACGTTTGCACGGTGCCAGGCTGCGGGAAACGCTTCACCGAGTACTCGAGCTTGTATAAGCACCACGTG 1011
|||||||||||||||||||||||||||||||.||.|||||.||.||||||||||||.||||.||.|||||||||
Sbjct 1627 AGCCATACGTTTGCACGGTGCCAGGCTGCGGAAAGCGCTTTACGGAGTACTCGAGCCTGTACAAACACCACGTG 1700
Query 1012 GTGCACACACACTGCAAGCCCTACACCTGCAGCACCTGCGGCAAGACCTACCGGCAGACCTCCACCTTGGCCAT 1085
|||||||||||.||||||||||||||.|||||.|.|||.|||||||||||||||||.|||||||||.|||||||
Sbjct 1701 GTGCACACACATTGCAAGCCCTACACGTGCAGTAGCTGTGGCAAGACCTACCGGCAAACCTCCACCCTGGCCAT 1774
Query 1086 GCACAAGCGCAGTGCCCATGGCGAGCTGGAGGCCACGGAGGAGAGTGAGCAGGCCCTCTATGAGCAGCAGCAAC 1159
||||||||||||.||.||.||.|||||||||||||||||||||||.|||||||||||.||||||||||||||.|
Sbjct 1775 GCACAAGCGCAGCGCACACGGGGAGCTGGAGGCCACGGAGGAGAGCGAGCAGGCCCTGTATGAGCAGCAGCAGC 1848
Query 1160 TTGAGGCCGCCTCTGCAGCCGAGGAGAGTCCGCCACCCAAACGACCCCGGATAGCTTACCTTTCGGAGGTGAAG 1233
|.||||||||||||||.||.|||||.||.||.||||||||||.|.|||..||.||||||||||||||.||||||
Sbjct 1849 TGGAGGCCGCCTCTGCTGCTGAGGAAAGCCCCCCACCCAAACCAACCCACATTGCTTACCTTTCGGAAGTGAAG 1922
Query 1234 GAAGAGAG-AGATGACATCCCAGCCCAGGTGGCGATGGTGACTGAAGAAGATGGGGCCCCCCAGGTGGCTCTGA 1306
|||||||| || ||.|||||||.||||.||.||.||||||||.||.||.||||||.||||.|||||||||||||
Sbjct 1923 GAAGAGAGCAG-TGCCATCCCAACCCAAGTAGCCATGGTGACGGAGGAGGATGGGCCCCCTCAGGTGGCTCTGA 1995
Query 1307 TCACTCAGGATGGTGCCCAGCAGGTCAGCCTGTCCCCGGAAGACCTGCAGGCCCTGGGGAGTGCCATCAGTATG 1380
||||||||||.|||.||||||||||||||||||||||.|||||||||||||||||||||||||||||||||.||
Sbjct 1996 TCACTCAGGACGGTACCCAGCAGGTCAGCCTGTCCCCAGAAGACCTGCAGGCCCTGGGGAGTGCCATCAGTGTG 2069
Query 1381 GTCACCCAGCACGGCAGCACCACCCTCACCATCCCCAGTCCTGATGCCGACCTGGCCACATCTGGCACACATAC 1454
||.||.||||||||||||||||||||||||||||||.|||.|.|||..||.||.|||||||||||||||||.||
Sbjct 2070 GTGACACAGCACGGCAGCACCACCCTCACCATCCCCGGTCATCATGAAGAACTAGCCACATCTGGCACACACAC 2143
Query 1455 AGTCACCATGGTCAGCGCCGATGGCACCCAGACGCAGCCC----------GTCACAATCATTACCTCTGGGGCT 1518
.|||||||||||||||||.||||||||.|||||.|||||| |||||||||||||||||||||||.
Sbjct 2144 GGTCACCATGGTCAGCGCTGATGGCACGCAGACTCAGCCCGTATGACCAGGTCACAATCATTACCTCTGGGGCC 2217
Query 1519 GTGGTGGCTGAGGACTCAAGTGTAGCATCTCTTCGTCATCAACAGGTGGCACTGTTGGCCACAGCCAACGGAAC 1592
.|||||.|||||||||||||.||.||.|||||||.|||.|||||||||||.|||||||||||||||||||||||
Sbjct 2218 TTGGTGACTGAGGACTCAAGCGTGGCGTCTCTTCATCACCAACAGGTGGCGCTGTTGGCCACAGCCAACGGAAC 2291
Query 1593 GCACATTGCAGTGCAGCTGGAGGAACAGCAGACCTTAGAGGAGGCCATCAATGTGGCCACTGCGGCCATGCAGC 1666
.|||||.|||||||||||||||||.|||||||||.|.|||||||||||.|..||.||||||||.||.|||||||
Sbjct 2292 ACACATCGCAGTGCAGCTGGAGGACCAGCAGACCCTGGAGGAGGCCATAAGCGTAGCCACTGCTGCTATGCAGC 2365
Query 1667 AAGGGGCTGTGACCCTGGAGACAACAGTGTCGGAGAGTGGCTGC------------------------------ 1710
|||||||||||||||||||.||.||| |||||.||||||
Sbjct 2366 AAGGGGCTGTGACCCTGGAAACCACA------GAGAGCGGCTGCTGAGCCCAAGAGGACCAGCTCCCACACCAC 2433
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 2434 ACTGGAGAAGGCTCCATGCTCACAGGCAGCCCTGCCTCCGGGGCCCCCAGCCACAGCTGACCCCAAGAAGATGG 2507
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 2508 CCGCATAGGCCTCAGGGGTGATGAGGCAACAGGAAAATGGCCTCTAGTGGAAAGGTCTGTGGGCTACACCCAAG 2581
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 2582 ATGAGGGCCAGGCAGCAGGCAGTCGACACTGAGCTTGGTCACCAGGCTGCCAGACACCTGCGTCCCTCCCTTGG 2655
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 2656 CAGGATATTATTCCTGCTCTGTCCACTCCCTTCCTCAGGGAGGTGGTGACTAGGTGGACGAGGACTGGCCTCCA 2729
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 2730 CCCTGGCTGCTAGTACCACCAGGGGAAAGGCCGACAGCTTTCAGCCCAGCGCCTCCCAGCAATAACCGTCTCCT 2803
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 2804 GGGGCTACGGTGGCCAAGATGCCTAGCCACTTGGCACCAGGGACTTCCCACCACCACAGTCAGAATTAATTCCT 2877
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 2878 CAGGGGCCTGTGGCTGGAGTGAAGGTGCCTCTTCGCTTGTCTGTGGCAGAGAGGCAAGCGAGTGGCCTGTACCC 2951
Query 1711 -------------------------------------------------------------------------- 1710
Sbjct 2952 AGACTGCTGGGGACTGGGTTTCATTTGTTTTGTGGTTTGGGTTTTTAATCCTATTTTGATAATTTTTTTTCCTG 3025
Query 1711 ---------------------------------------------------------- 1710
Sbjct 3026 CTCTGGGTGGTGGTGGCAAACGGGCGGATGAGTATTTAATAAAAGTTGCAAGTTTCCA 3083
