Nucleotide Global Alignment

Description

Query:
TRCN0000478194
Subject:
XR_001755650.1
Aligned Length:
3076
Identities:
195
Gaps:
2865

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GAAACAAATTTTGGTCGGTGCTCCCTGGGCTGCTGGTCTTCTTTACCTTCCAGCTGCTCACAGAACAGAGAGTT  74

Query    1  ------------------------------------------------ATGCTTATAAACAAGTTGTGGCTGCT  26
                                                            ||||||||||||||||||||||||||
Sbjct   75  TCTACATACAAGCAGAAGATGTGAAAATATTGGGAATAAATAAAGTATATGCTTATAAACAAGTTGTGGCTGCT  148

Query   27  CCTGGTTACGTTGTGCCTGACCGAGGAACTGGCAGCAGCGGGAGAGAAGTCTTATGGAAAGCCATGTGGGGGCC  100
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CCTGGTTACGTTGTGCCTGACCGAGGAACTGGCAGCAGCGGGAGAGAAGTCTTATGGAAAGCCATGTGGGGGCC  222

Query  101  AGGACTGCAGTGGGAGCTGTCAGTGTTTTCCTGAGAAAGGAGCGAGA-CACAACTTG-----------------  156
            ||||||||||||||||||||||||||||||||||||||||||||||| .||.||.||                 
Sbjct  223  AGGACTGCAGTGGGAGCTGTCAGTGTTTTCCTGAGAAAGGAGCGAGAGGACGACCTGGACCAATTGGAATTCAA  296

Query  157  -------CAGCTACTGAATGATATGGCTGGCCGGCTCTACCATTTCA--GTGA---------------GGTTCT  206
                   |||.|.||.||.|||     |..|.||||||||...||.|  |.||               |||| |
Sbjct  297  GGCCCAACAGGTCCTCAAGGAT-----TCACTGGCTCTACTGGTTTATCGGGATTGAAAGGAGAAAGGGGTT-T  364

Query  207  -----GCCTAATCT----CTTT----------------------------------------------------  219
                 ||||  |||    |.||                                                    
Sbjct  365  CCCAGGCCT--TCTGGGACCTTATGGACCAAAAGGAGATAAGGGTCCCATGGGAGTTCCTGGCTTTCTTGGCAT  436

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  437  CAATGGGATTCCGGGCCACCCTGGACAACCAGGCCCCAGAGGCCCACCTGGTCTGGATGGCTGTAATGGAACTC  510

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  511  AAGGAGCTGTTGGATTTCCAGGCCCTGATGGCTATCCTGGGCTTCTCGGACCACCCGGGCTTCCTGGTCAGAAA  584

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  585  GGATCAAAAGGTGACCCTGTCCTTGCTCCAGGTAGTTTCAAAGGAATGAAGGGGGATCCTGGGCTGCCTGGACT  658

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  659  GGATGGAATCACTGGCCCACAAGGAGCACCCGGATTTCCTGGAGCTGTAGGACCTGCAGGACCACCAGGATTAC  732

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  733  AAGGTCCTCCAGGGCCTCCTGGTCCTCTTGGTCCTGATGGGAATATGGGGCTAGGTTTTCAAGGAGAGAAAGGA  806

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  807  GTCAAGGGGGATGTTGGCCTCCCTGGCCCAGCAGGACCTCCACCATCTACTGGAGAGCTGGAATTCATGGGATT  880

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  881  CCCCAAAGGGAAGAAAGGATCCAAGGGTGAACCAGGGCCTAAGGGTTTTCCAGGCATAAGTGGCCCTCCAGGCT  954

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  955  TCCCGGGCCTTGGAACTACTGGAGAAAAGGGAGAAAAGGGAGAAAAGGGAATCCCTGGTTTGCCAGGACCTAGG  1028

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1029  GGTCCCATGGGTTCAGAAGGAGTCCAAGGCCCTCCAGGGCAACAGGGCAAGAAAGGGACCCTGGGATTTCCTGG  1102

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1103  GCTTAATGGATTCCAAGGAATTGAGGGTCAAAAGGGTGACATTGGCCTGCCAGGCCCAGATGTTTTCATCGATA  1176

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1177  TAGATGGTGCTGTGATCTCAGGTAATCCTGGAGATCCTGGTGTACCTGGCCTCCCAGGCCTTAAAGGAGATGAA  1250

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1251  GGCATCCAAGGCCTACGTGGCCCTTCTGGTGTCCCTGGATTGCCAGCATTATCAGGTGTCCCAGGAGCCCTAGG  1324

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1325  GCCTCAGGGATTTCCAGGGCTGAAGGGGGACCAAGGAAACCCAGGCCGTACCACAATTGGAGCAGCTGGCCTCC  1398

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1399  CTGGCAGAGATGGTTTGCCAGGCCCACCAGGTCCACCAGGCCCACCTAGTCCAGAATTTGAGACTGAAACTCTA  1472

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1473  CACAACAAAGAGTCAGGGTTCCCTGGTCTCCGAGGAGAACAAGGTCCAAAAGGAAACCTAGGCCTCAAAGGAAT  1546

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1547  AAAAGGAGACTCAGGTTTCTGTGCTTGTGACGGTGGTGTTCCCAACACTGGACCACCCGGGGAACCAGGCCCAC  1620

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1621  CTGGTCCATGGGGTCTCATAGGCCTTCCAGGCCTTAAAGGAGCCAGAGGAGATCGAGGCTCTGGGGGTGCACAG  1694

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1695  GGCCCAGCAGGGGCTCCAGGCTTAGTTGGGCCTCTGGGTCCTTCAGGACCCAAAGGAAAGAAGGGGGAACCAAT  1768

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1769  TCTCAGTACAATCCAAGGAATGCCAGGAGATCGGGGTGATTCTGGCTCCCAGGGCTTCCGTGGTGTAATAGGAG  1842

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1843  AACCAGGCAAGGACGGAGTACCAGGTTTACCAGGTCTGCCAGGCCTTCCGGGTGATGGTGGACAGGGCTTCCCA  1916

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1917  GGTGAAAAGGGGTTACCTGGACTTCCTGGTGAAAAAGGCCATCCTGGTCCACCTGGCCTCCCAGGAAATGGGTT  1990

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1991  ACCAGGACTTCCTGGACCCCGTGGGCTTCCTGGAGATAAAGGCAAGGATGGATTACCGGGACAACAAGGCCTTC  2064

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2065  CCGGATCTAAGGGTGACTGCTGCTGTAGAGAGGTTGGTAAAGGAGACTTAGACACAGAGAGAGGAATCACCCTG  2138

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2139  CCCTGTATTATTCCTGGGTCATACGGTCCATCAGGATTTCCAGGCACTCCCGGATTCCCAGGCCCTAAAGGGTC  2212

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2213  TCGAGGCCTCCCTGGGACCCCAGGCCAGCCTGGGTCAAGTGGAAGTAAAGGAGAGCCAGGGAGTCCAGGATTGG  2286

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2287  TTCATCTTCCTGAATTACCAGGATTTCCTGGACCTCGTGGGGAGAAGGGCTTGCCTGGGTTTCCTGGGCTCCCT  2360

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2361  GGAAAAGATGGCTTGCCTGGGATGATTGGCAGTCCAGGCTTACCTGGTTCCAAGGGAGCCACTGGTGACATCTT  2434

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2435  TGGTGCTGAAAATGGTGCTCCGGGGGAACAAGGCCTACAAGGATTAACAGGGCACAAAGGATTTCTTGGAGACT  2508

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2509  CTGGCCTTCCAGGACTCAAGGGTGTGCACGGGAAGCCTGGCTTACTAGGCCCCAAAGGTGAGCGGGGCAGCCCT  2582

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2583  GGGACACCAGGACAGGTGGGACAGCCAGGCACCCCAGGATCTAGTGGTCCATATGGCATCAAGGGCAAATCTGG  2656

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2657  GCTCCCAGGAGCACCAGGCTTCCCAGGCATCTCAGGACATCCTGGAAAGAAAGGAACAAGAGGCAAGAAAGGTC  2730

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2731  CTCCTGGATCAATTGTAAAGAAAGGGCTGCCAGGGCTAAAAGGCCTTCCTGGAAATCCAGGCCTAGTAGGACTG  2804

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2805  AAAGGAAGCCCAGGCTCTCCAGGGGTCGCTGGGTTGCCAGCCCTCTCTGGACCCAAGGGAGAGAAGGGGTCTGT  2878

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2879  TGTATTCCTGGAACAAGAGGATTAAAAGGAATTCCAGGATCAACTGGAAAAATGGGACCATCTGGACGTGCTGG  2952

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2953  TACTCCTGGTGAAAAGGGAGACAGAGGCAATCCGGGGCCAGTCGGAATACCTAGTCCAAGACGTCCAATGTCAA  3026

Query  220  ------------------------------------------  219
                                                      
Sbjct 3027  ACCTTTGGCTCAAAGGAGACAAAGGCTCTCAAGGCTCAGCCG  3068

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