Nucleotide Global Alignment

Description

Query:
TRCN0000478282
Subject:
NR_001278.1
Aligned Length:
3004
Identities:
187
Gaps:
2789

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CTGGAACCATGGAGCTCAGCGTCCTCCTCTTCCTTGCACTCCTCACAGGCCTCTTGCTACTCCTGGTTCAGCGT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CACCCTAACTCCCATGGCACCCTCCCACCAGGGCCCCGCCCTCTGCCCCTTTTGGGGAACCTTCTGCAGATGGA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CAGAAGAGGCCTACTCAAATCCTTTCTGAGGTTCCGAGAGAAATATGGGGACGTCTTCACGGTACACCTGGGAC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CGAGGCCCGTGGTCATGCTGTGTGGAGTAGAGGCCATACGGGAGGCCCTGGTGGACAACGCTGAGGCCTTCTCT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GGCCGGGGAAAAATCGTCATCATGGACCCAGTCTACCAGGGATATGGCATGCTCTTTGCCAATGGAAACCGCTG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GAAGGTGCTTCGGCGATTCTCTGTGACCACCATGAGGGACTTCGGGATGGGAAAGCGGAGTGTGGAGGAGCGGA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TTCAGGACGAGGCTCAGTGTCTGATAGAGGAACTTCGGAAATCCAAGGGAGCCCTCGTGGACCCCACCTTCCTC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TTCCATTCCATTACCGCCAACATCATCTGCTCCATCATCTTTGGAAAACGCTTCCACTACCAAGATCAAGAGTT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CCTGAAGACGCTGAACTTGTTCTGCCAGAGTTTCTTACTCATCAGCTCTATATCCAGCCAGCTGTTTGAGCTCT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TCTCTGGCTTCTTGAAATACTTTCCTGGGGCACACAGGCAAGTTTACAAAAACCTACAGGAAATCAATGCTTAC  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  ATTGGCCACAGTGTGGAGAAGCACCGTGAAACCCTGGACCCCAGCGCCCCCAGGGACCTCATCGACACCTACCT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GCTCCACATGGAAAAAGAGAAATCCAACCCACACAGTGAATTCAGCCACCAGAACCTCATCATCAACACGCTCT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CGCTCTTCTTTGCTGGCACTGAGACCACCAGCACCACTCTCCGCTACGGCTTCCTGCTCATGCTCAAATACCCT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  CATGTCGCAGAGAGAGTCTACAAGGAGATTGAACAGGTGGTTGGCCCACATCGCCCTCCAGCGCTTGATGACCG  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  AGCCAAAATGCCATACACAGAGGCAGTCATCCGTGAGATTCAGAGATTTGCTGACCTTCTCCCCATGGGTGTGC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CCCACATTGTCACCCAACACACCAGCTTCTGAGGGTACACCATCCCCAAGGACACGGAAGTATTTCTCATCCTG  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  AGCACTGCTCTCCGTGACCCACACTACTTTGAAAAACCAGACGCCTTCAATCCTGACCACTTTCTGGATGCCAA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TGGGGCACTGAAAAAGAATGAAGCTTTTATCCCCTTCTCCTTAGGGAAGCGGATTTGTCTTGGTGAAGGCATTG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  CCCGTGCGGAATTGTTCCTCTTCTTCACCACCATCCTCCAGAACTTCTCCGTGGCCAGCCCCGTGGCTCCTGAA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GACATCGATCTGACACCCCAGGAGTGTGGTGTGGGCAAAATACCCCCAACATACCAGATCTGCTTCCTGCCCCG  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  CTGAAGGGGCTGAGGGAAGGGGGTCAAAGGATTCCAGGGTCATTCAGTGTCCCCACCTCTGTAGATAATGGCTC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  TGACTCCCTGCAACTTCCTGCCTCTGAGAGACCTGCTGCAAGCCAGCTTCCTTCCCTTCCATGGCACCAGTTGT  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  CTGAGGTCGCAGTGCAAATGAGTGGAGGAGTGAGATTATTGAAAATTATAATATACAAAATTATATATATATAT  1702

Query    1  ------ATGGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCC  68
                  |..||||||||.||.||.||||||.||||||||.||||||.|||||||||||||||||||||||..||
Sbjct 1703  TTTGAGACAGAGTCTCACTCAGTTGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCACTGCAACCTCCACC  1776

Query   69  TCTCGAGG-TCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCG  141
             |.||.|| |||||..|||||||||||||.||||||..||||||||||||||||||.....||.||||||||.|
Sbjct 1777  -CCCGGGGTTCAAGAAATTCTCCTGCCTCAGCCTCCCTAGTAGCTGGGATTACAGGTGTGTGCTACCATGCCTG  1849

Query  142  GCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCT  215
            |||||   |||||||||||||||||||||||||||||||||.||||||||||||||.||||.|||||||||.||
Sbjct 1850  GCTAA---TTTTTGTATTTTTAGTAGAGATGGGGTTTCACCGTGTTGGCCAGGCTGATCTCAAACTCCTGAACT  1920

Query  216  CAAG----------------------------------------------------------------------  219
            ||||                                                                      
Sbjct 1921  CAAGTGATTCACCCACCTTAGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGTCACCATGCCCGGCCATGTATA  1994

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1995  TATATAATTTTAAAAATTAAGATGAAATTCACATAAAATAAAATTAGCCATTTTAAAGTGTACAATTTAGTGGT  2068

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2069  GTGTGGTTCATTCACAAAGCTGTACAACCACCACCATCTAGTTCCAAACATTTTCTTTTTTTCTGAGACGGAGT  2142

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2143  CTCACTCTGTCACCCAGGTTCGAGTTCAGTGGTCTTGAACTCCTGATGTCAGGTGATTCTCCTAGTTCCAAATG  2216

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2217  TTTTCATTATCTCCCCCCAACAAAACCCATACCTATCAAGCTGTCACTCCCCATACCCCATTCTCTTTTTCATC  2290

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2291  TCAGCCCCTGTCAATCTGGTTTTTGTCCTTATGGACTTACCAATTCTGAATATTTCCTATAAACAGAATCACAC  2364

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2365  AATATTTGATTTTTTTTTTAAAACTAAGCCTTGCTCTGTCTCCCAGGCTGGAGTGCTGTGGCGTGATTTTGGTT  2438

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2439  CACTGCAACCTCCGCCTTCCAAGTTCAAGAGATTCTCCTGCCTCAGCTTCCAAGTAGCTGGGATTACAGGCATG  2512

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2513  TGGTACCACGCCTGGCTAATTTTCTTGTATTTTTAGTAGGGACATGTTGGCCAGGCTGGTTGTGAGCTCCTGGC  2586

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2587  CTCAGGTGATCCACACGCCTCAGTGTCCCAGAGTGCTGATATTACAGGCGTAATATGTGATCTTTTGTGTCTGG  2660

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2661  TTCCTTTCACGTTGAACGCTATTTTTGAGGTTCGTGCCTGTTGTAGACCACAGTCACACACTGCTGTAGTCTTC  2734

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2735  CCCCATCCTCATTCCCAGCTGCCTCCTCCTACTGTTTCCCTCTATCAAAAAGCCTCCTTGGCGCAGGTTCCCTG  2808

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2809  AGCTGTGGGATTCTGCACTGGTGCTTTGGATTCCCTGATATGTTCCTTCAAATCCACTGAGAATTAAATAAACA  2882

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2883  TCGCTAAAGCATGACCTCCCCACGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA  2956

Query  220  --------------------------------------------  219
                                                        
Sbjct 2957  AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA  3000

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