Nucleotide Global Alignment
Description
- Query:
- TRCN0000478282
- Subject:
- NR_027513.3
- Aligned Length:
- 3344
- Identities:
- 187
- Gaps:
- 3131
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTTGACGCTGTGGCCCGGAAGTGGAGCGGCTGTCGCAGTGCGGCTCCGGCAGTGGCAGCGGAGGCCTGTGTTTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGGCCTTCGGCAAGCGACTGAGATGGCGAGCGCAACTGCACCTGCAGCCGCAGTCCCCACCCTGGCTTCGCCTT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGGAGCAGCTCCGGCACTTGGCGGAGGAGCTGCGGTTGCTCCTGCCTCGAGTGCGGGTCGGCGAAGCCCAGGAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ACCACCGAGGAGTTTAATCGAGAGATGTTCTGGAGAAGACTCAGAAACCCAGAAGTTCTGTGAACAAGTCCATG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTGCCATCAAGGCATTTATTGCAGTGTACTATTTGCTTCCAAAGGATCAGGCCCTGAGAACAATGACCTTATTT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCTACAACAGTGTCTGGGTTGCGTGCCAGCAGATGCCTCAGATACCAAGAGATAACAAAGCTGCAGCTCTTTTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATGCTGACCAAGAATGTGGATTTTGTGAAGGATGCACATGAAGAAATGGAGCAGGCTGTGGAAGAATGTGACCC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TTACTCTGGCCTCTTGAATGATACTGAGGAGAACAACTCTGACAACCACAATCATGAGGATGATGTGTTGGGGT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTCCCAGCAATCAGGACTTGTATTGGTCAGAGGACGATCAAGAGCTCATAATCCCATGCCTTGCGCTGGTGAGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GCATCCAAAGCCTGCCTGAAGAAAATTCGGATGTTAGTGGCAGAGAATGGGAAGAAGGATCAGGTGGCACAGCT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGATGACATTGTGGATATTTCTGATGAAATCAGCCCTAGTGTGGATGATTTGGCTCTGAGCATATATCCACCTA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TGTGTCACCTGACCGTGCGAATCAATTCTGCGAAACTTGTATCTGTTTTAAAGAAGGCACTTGAAATTACAAAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GCAAGTCATGTGACCCCTCAGCCAGAAGATAGTTGGATCCCTTTACTTATTAATGCCATTGATCATTGCATGAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TAGAATCAAGGAGCTCACTCAGAGTGAACTTGAATTATGACTTTTCAGGCTCATTTGTACTCTCTTCCCCTCTC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ATCGTCATGGTCAGGCTCTGATACCTGCTTTTAAAATGGAGCTAGAATGCTTGCTGGATTGAAAGGGAGTGCCT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ATCTATATTTAGCAAGAGACACTATTACCAAAGATTGTTGGTTAGGCCAGATTGACACCTATTTATAAACCATA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TGCGTATATTTTTCTGTGCTATATATGAAAAATAATTGCATGATTTCTCATTCCTGAGTCATTTCTCAGAGATT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CCTAGGAAAGCTGCCTTATTCTCTTTTTGCAGTAAAGTATGTTGTTTTCATTGTAAAGATGTTGATGGTCTCAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TAAAATGCTAACTTGCCAGTGATTAAATGAGTGCCCTTCCAAAGTTTCTTTTTACCAGAAATACAGTGGATTGA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GACTAGAACATTGCTTTCATTTGGGTTTGTAGGTTTAAAAATCTGATTCTAATCAGAAGTATATTTAGAACAAA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ACACTTTATTTATAAAAGATGACTCCAAAATTCATCTTAGTATTTCACCATGTTATATATTATTATCAGCAAGT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CCTTCTGAATATTATCACAGATTACTCCATGTCTCTAAAATATATTGGCATTGAGCTCATTTGTTAGGTTTGCC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CACCTTATTGAACAGATTTATTTTCCTTATACATACTTGTGTTGTCCTTGGTTACGTGTGTCCCCAAATGTAAA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TACCAAATTTTTATAAATCAAAAATTTTTTAGTGTGTAAGAGATTTTATGTAATTTTAAGGGCCTTTTCAGTTC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 ATCCTTTTGCAAAACCATCACCACTTAATTATACTTTTGCATCAGTCTAGAAGACTGCATATTGGAAAGCAGTG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TAAATCTATAATGATGTATATTCTGGTGAGCTGAATAGGGCATTATGCATGTCCTACAGGTCTCCGCCACCTCT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CATGCCCATCATCTTCCTTTTGTAGGTGTAATTCATAACATATGCCTTTCTGCTGTCTTTAGGTATAATCAGCA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 ACAGCAGTCATTCTTTGAGTGACTAATGTATACTTGGGGTTGGGGTTGAAATTCCTTAAGCCAAATGAGTTTTA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GCTTACTGTTTTGAAGTGCCATTTTGTATTGTTAACAAGTGTCATGAAGGGAAGGAACTAAAATCAAACTGACA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GAGTGTCAAGGCAACAAAATAACATAAACAAAATAATAACATTGTACAACAGTCTAGTTCTTTTATCCTTTCAT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 ATAGAGCCTATTTTTTATATACTTTTATATTTCTCTACTGGACCAAATTCATGTTATTAACATCAGACTTTAAT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TGTGGGATACTTAATGAATATAGAACTCTAATATAAAGACTTACCTCTAGCTGAATTATTCTCTCAGGTCCTGT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 ATTGTATAACTTCGTTCAGTCATGTTTGGATCTTTAAGGATAATGATCAGGGAAAGCACTGATCAATGTAATTT 2442
Query 1 -------------------------ATGGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCG 49
|||||||||...||||||.||||..||||||||.|||||||...|||||
Sbjct 2443 TTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTTGCTCTGTCCCCCAAGCTGGAGTGCAGTGGCACACTCTCG 2516
Query 50 GCTCACTGCAACCTCTGCCTCTCGAGG---TCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTAC 120
|||||||||||||||.||||| |.||| ||||||.||||||..||.||.|||||...|||||||||||.|||
Sbjct 2517 GCTCACTGCAACCTCCGCCTC-CCAGGTTCTCAAGCAATTCTCTGGCTTCAGCCTCTCAAGTAGCTGGGACTAC 2589
Query 121 AG--GCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCA 192
|| ||||| |.||||||.||.||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 2590 AGATGCACA--CCACCATGTCCAGCTAA---TTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCA 2658
Query 193 GGCTGGTCTCGAACTCCTGACCTCAAG----------------------------------------------- 219
||||||||||.||||||||||||||.|
Sbjct 2659 GGCTGGTCTCAAACTCCTGACCTCAGGTGATCTGCCCACGTCAGCCTCCCAAAGTGCTGGGATTACAGATGTGA 2732
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2733 GCCACCGAGCCCAGCTTGATCAATGTAATTTTAAGATTACCTAAAAATTCCATTTTGGGATAATATCCCACTTC 2806
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2807 ATCAGAAATATTAGAATGATTTAAGTGTTAGGTCCTTTCCCTTATCTGTAAGTTAATGAATGTATTAATGAGCA 2880
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2881 GTAAAATGGTTGCAAAAAACCTGAACCTGAACAATCTGAATGTACTCCTTAAAGGTATCTGAGCACCTTTTCAA 2954
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2955 CCTGAATGACTACTCATTTATCTGATAAAGTGATGTAGTTTGGATATTCAACCCTGCAAACCTCATGCTGAAAT 3028
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3029 TGGATTCCCAGTGTTGGAGGTGGGGCCTAATGGGAGGTGTTTGGATCCCTCATGAATGGCTTCGTTCCATTGGT 3102
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3103 GGGGTAATGAGTAAGTTCTCGCTCTATATGTCCCTCCCCCACCCCAGAGCTGGCTGTTAAAACGAGGCTGGCAC 3176
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3177 CTGGCACTTACCCCTACCCCTCAACCCATTCTTGCCCTGTGATCTCTGCTCACGTTGCCTCCCTTCATCTTCCT 3250
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3251 GCATAAGTGGAAGCAGCCTGAAGCCCTCACTGTTTCTTGTACAGCCTGCAGAGCCGTGAGCCAAATAAAGCTCT 3324
Query 220 -------------- 219
Sbjct 3325 TTTCTTTTAAACTA 3338
