Nucleotide Global Alignment
Description
- Query:
- TRCN0000478282
- Subject:
- NR_028077.2
- Aligned Length:
- 4328
- Identities:
- 193
- Gaps:
- 4114
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACTTTTGATGGGTTCCGGGTCCCAAAAGGGTTCGAGGCCTCTTGCCTTCGCTCCGTAGGAGGGAGTTCTCTTCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCCCTGGGGGCCGCAGGACTGTCCAGGAATACAGTTTCCAGGTGAGATCTTACTTGAAACACCGGTAGTTCTA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCACAGCTAAAATGGCATCTACTTGGGCTATCCAGGCCCACATGGACCAGGATGAACCTTTGGAAGTAAAGATA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAGGAAGAGAAATATACCACCAGACAGGATTGGGACCTGCGTAAAAACAACACCCATAGCAGAGAGGTCTTCCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCAGTACTTCAGACAGTTCTGCTACCAGGAGACATCTGGTCCCCGTGAGGCTTTGAGCCGACTCCGAGAACTTT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCCATCAGTGGCTGAGGCCAGAGACCCACACCAAAGAACAGATTCTGGAGCTGCTGGTGCTGGAGCAGTTCCTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACCATCCTACCTGAGGAGCTCCAGGCCTGGGTGCAGGAGCAGCATCCAGAGAGTGGGGAGGAGGTGGTGACTGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCTGGAGGATTTAGAGAGAGAACTGGATGAACCAGGAGAGCAGGTCTCAGTCCACACTGGGGAACAGGAAATGT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCTTGCAGGAGACGGTACGTCTACGAAAAGAAGGAGAACCCAGTATGTCCCTCCAGTCCATGAAAGCCCAGCCA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AAGTATGAATCTCCAGAACTTGAATCCCAACAGGAGCAAGTTTTAGATGTTGAGACTGGAAATGAGTATGGGAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TTTAAAGCAAGAAGTTTCTGAAGAAATGGAACCACATGGGAAGACATCCAGTAAATTTGAAAATGATATGTCCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGTCTGCTAGGTGTGGAGAAACTCGTGAACCTGAAGAAATAACAGAAGAGCCCTCTGCTTGCTCCAGAGAAGAT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AAACAACCTACCTGTGATGAAAATGGAGTAAGCCTGACTGAGAACTCTGACCATACTGAACATCAGAGAATCTG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TCCAGGAGAAGAATCTTACGGATGTGATGACTGTGGAAAAGCTTTTAGTCAGCACTCACACCTCATAGAACATC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGAGGATCCATACTGGAGATAGACCCTACAAATGCGAAGAATGTGGAAAAGCTTTCCGTGGGAGAACTGTGCTT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ATTCGACACAAAATAATACACACTGGAGAGAAACCGTATAAGTGTAATGAATGTGGCAAAGCCTTTGGCCGGTG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GTCAGCTCTTAACCAACATCAGAGACTTCACACAGGAGAAAAACACTATCACTGTAATGACTGTGGCAAAGCCT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TTAGTCAGAAAGCAGGCCTCTTTCACCATATCAAGATCCACACAAGAGACAAACCTTATCAGTGCACTCAGTGT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AATAAAAGTTTTAGTCGGCGTTCCATACTTACTCAGCATCAAGGAGTTCATACCGGCGCCAAGCCGTATGAGTG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CAACGAGTGTGGAAAAGCCTTTGTTTATAACTCATCCCTTGTTTCCCATCAGGAAATCCACCACAAAGAAAAAT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GCTATCAGTGTAAGGAATGTGGGAAATCCTTCAGTCAGAGTGGCCTTATTCAGCATCAGAGAATTCACACTGGG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GAAAAACCCTACAAATGTGACGTATGTGAAAAAGCCTTTATTCAAAGGACAAGTCTTACAGAACATCAGCGAAT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TCACACTGGAGAAAGACCCTATAAATGTGATAAGTGTGGGAAGGCGTTTACTCAAAGATCAGTCCTCACGGAAC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 ATCAGAGAATCCACACTGGAGAGAGGCCCTACAAGTGTGATGAGTGTGGGAATGCCTTCCGAGGAATCACCAGC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CTCATTCAGCATCAGAGAATCCACACTGGGGAGAAGCCCTACCAATGTGATGAGTGTGGAAAAGCCTTCAGACA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GAGGAAGAAGACCAGCTACAAGGAAATACTTCTGAAAAATCACTCTGAACCCCAAGCTGGAGTGAATCTTCTCC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TGAGCTCTCTCATTCCAGAATGGCAATCTTGTTTCAGGAGAGATCTCTAATAGTGACTGATGGTAAAGGAAGAA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GGCTGTGCCTAGAACAAAGAATCAGGCTGGCAAAGAAATCACAGGTCTTTCCTCAAACTTTAAATTGCTACTCT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CTGGAGATAGCTACCTGGACTTTACAGAGCTGTCAGAAGACTTGGGAAGGTTTGCCAGCATTGGAAAAAGCCAC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TTGGACTTCACAGAGCTGTCAGAAGACTTAGGAAGCTTTGCCAGTAGTTCCTGAGACCAGAAATACATATTATG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 AAGCAGGTGCTGGAACAGGCCCTGGCCCCTACTTGTGAAGCTGCAGATATAGATGGTGTTACTGAGAAGGAAAC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TAAGGACTTGGCTCCAAAACAAAACAAAACAAAATCTGGAGATGCTGAATTTTGTTGGGGGGAATGTCTGTAGA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 ACTGCAACATCAATGCAGTAAGTGTAGTAAAAGCTTTAGTTTATGGTGAGTCATTACTCAGCATCATGGAGTCC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 ACGATGAAGAGAATCTCTTTTCAATCTGTGCAATCAACAAGTTTTTGAAAGGCTTTTGTTTATAGTGGAACCCT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 CTTTTCCCCCTAGAAGAACCACCACAAGGAAAAATGCTGTCACCATAAGGAATGTGGGAAAGTTTTCAGCCACA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TGGCCTTATTTGACTTCAAAGAATCCACATGAGAGAGAGACTGCATAAATGTAATAACTGAGGAGGCCTTTGTT 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 CAGCAAAGAAACCTTATACAAACTCGTATAAAGAATGTAGGAAGACCTTCACCCAGAAGCCAGGACTGACTGTG 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 CACCAGAGAATCTGCACAATAAACATGATGAATGTGGAGATGCTTGCTTCAGCATTGGAGAATTCACAGTAAAG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 GGAAACCCTGCCAGTGTGATGAGTACGGAAAAGTCTTCAGAGGTTGGAACTTGGGAAAAATCAGTGAGTGAATT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 CATATTAGAGAGGCTCTTATAAATGAGAGGATTGTGGAAACTTGTATAGACAGAGATCAGACCTCAACAAGGGA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 GCCTCCACAGTATTGAAAAGTTAATATAATTAATGTAAGTGGGCAAGTTGTATGGGGAATGGGTAGTCTAAATT 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 GCTCATTTTAGCCAGTAAAAACATTAAATTAGTTTCTTAGATCAAGAAAAGGAAATGTTAGAAGTTATTTTTCC 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 CTTCCAGAGGGGTCTATATGTGTAAGCAACCAGGACTTTTGAAATAAGTTGCATCTCTGGATTTGTGATCTGTC 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 TCCTGGATGATTATCTCTGTTTTGGGAGACAGGTATTTTTTCTTCATGCCTGCTCTAGTCTCATCTCATATCTT 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 TAATTCATTCAGCAAGTATACACAATAGTATTATCGTCTACTGTTTGTTGTAAATATATATATATTATTTTCTT 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 TTTGGTCTGAGTAGGCTTGTATTGGTACCCTAGGACATAAAAATCACATATATCATGTTTCAGTAAATGCAGTG 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 AAAGGAACTATATTATTAAATTGCTGGGAATTTCTGTAAATTTGAGACTACCTTTATATTCTCCAACACAAGAC 3478
Query 1 --------------------------------------------------------------------ATGGAG 6
||||||
Sbjct 3479 CGTGTAGGTGTCCCTTCAGAGAGTATATTTTTCTAGCTTGGCTTCTTTATTTTCTTTATTTTTTTGAGATGGAG 3552
Query 7 TCT--CATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGG-T 77
||| | |.|||||||||||.||||||||.|.|||||.||||||||||||||||||||||.||||| |.||| |
Sbjct 3553 TCTTGC-TCCTGTCGCCCAGGCTGGAGTGCAATGGCACGATCTCGGCTCACTGCAACCTCCGCCTC-CCAGGTT 3624
Query 78 CAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTT 151
||||.||||||||||.|||.|.||||.||||||||||||||||||||||..||.|||||.|||.||||| ||
Sbjct 3625 CAAGTGATTCTCCTGTCTCAGTCTCCCGAGTAGCTGGGATTACAGGCACTTGCCACCATTCCCAGCTAA---TT 3695
Query 152 TTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG------ 219
|||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||...|
Sbjct 3696 TTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTTGTGATCTGC 3769
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3770 CCACCTTGGCCTCCCAAAGTTCAGGGATTACAGGCATGAGCCACCATGCCCGGCTGTTTTTTTAAGATAGAAAA 3843
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3844 ATATACTTCATGTATAGCCTATTGACAGATAATGACTGATATTTTTTCTTATAGATAACACATAATAAACATTG 3917
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3918 TGAAGACTAATAAGTAACTTGCTTATTCTTTTCAGTTCTAAAACCTGTAGGAAAGAATCTTTAGAAGCTGTCAA 3991
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3992 CAAGTTGATAATGTAGCCCAATCTCTACCCATGATAGGAGAGTAAGGCTTATATATTTTATAGTAGGGCACTAA 4065
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4066 ATACAGGAACCATGTATTTAAAAACTTTTTAGTGATTATCTCAGAATTCTAGGTGTCCCTCTGCTGTACATCCC 4139
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4140 TAAATTTTTTGCATAGGTATTATTAATAAATTCATTATTTTCAAAGATGGACTGTGTTCTGTAAAAAGCTTTTC 4213
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4214 CAGTATCTGCAAATCACACAGTTTTTTTTAACTCTATTACTATTATATAAAATGATTTCTTAATATTGAACCAA 4287
Query 220 ------------------------------------ 219
Sbjct 4288 CCTTGCATTCCTAGAATAAACCTCACTTAGCCATGA 4323
