Nucleotide Global Alignment

Description

Query:
TRCN0000478282
Subject:
NR_126390.1
Aligned Length:
3943
Identities:
191
Gaps:
3728

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GGGCGGTTTGAGACCAGCCTGGGCAATATAGCAACCGTCCTGCTGGCACACAAACCCTCCTGCCTCTAAACAGA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  ATTTGATGGGCCCCTTGGCAAAGGCAGGTTTTAGAAACTCCTCGGGGGCTGGAGCGCAAGGAGAGTCTGAGCCA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GGCCAAGCCTCCCTGGGGGAACATGGCTGAAGGAAGACCTACAGACATCTCCCCTGGGTGGGAGCCTGTGTTCA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GAAGCAGCAGATCCAAGTCTCTGTGTGGCTGAGGAGAGGACATCCTGCTGGCAACACGGAGAATGCCATATAAC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AGCTAAGACAGAGATCAGAGCCATGCAGCTGCAAGCCGAAGCAGGCCAAGGATTGCCAGCAAACCAAGAGAGGC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TGGAAGAAGAGAGAAGGATCTTTCCCTGCTGATTTCACAGGGAGCATGGCCCTTGATCTCAGGACCTTGACCCC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  AGAACTTTCTGGCTGCCAATACCAAGTTCCTCCTCTCCATCTCACATTCAAAGAGCACACAGAGAGGCTCTAAT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TGGGTCTTTCTACATCCTGTGTCCGTACAGAGCTCTCGCGTTTGGGTGGGGACTTTGCACCGTGACCAGTCTAA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GATCAGCACCAGCCCCTGGTCCAATCAGCTGTGGCCAAGACCCTTGAAGACACAGAAACATGGCCAGTGTGGCT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  ATCTCTGATGGCAACATCAAGATGTCTAATGACATGAAGGCACACGAGTTGGTGACATCAGAGGAGGTGAAACA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GTGCAAGAAGGTAGTGCTCTTCTGACATAATGAGGCCAAGAAGAATGTCACCCTGGAAGGGGCAAGGAGATCCT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CGTAGGTGGTGCAGGCCAGACTGTTGATGGCCCTATGCCACCTTAGTCAAGATGCTGCCAGACAAGGACTGCTC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CTCCACCCTCTATGACACAGCCTGAGACCAAGAACAGCAAGAAGGAAGATCTGGAGTTTATCTTCTGGGACCCT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GAGTCTGTACCCTCTAAGAGCTAAGTGACCTATGCCAGCTCCAAGGATGTCATCAAGGGGAAGCTGATGGAGAT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CAAGCATGAATCACAAGGAGGTCAAGGGCCATAGCATCCTGGCAGAGAAGCTTGGAGGCAGCGCCATCATCTCC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TGGAGGGCATGCCTTTGTGAACCCCCTCCAGCCCCCTGCCTGGAACATCTGGCAGCTCCTGACCTATCTGCAGA  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  GAGTTGTCTGTCCCCTTCCTCCAAGACCAGAGGGGTTTGGGGGATCCCAGCAAGGGGAAGATAATCCCCTCACC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  CCAGTTACCAAGCAGCCCTCACCCCCAGGCCTTCCTCCTCCCTCCATCCCTGATGGTTCTGGCTTTCCCAGGCC  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  ACTTTTGACCTTCTAATTCCTCTTGGATTGAAACAGACAAAGTTCCCCTCACGCACCCTAGTTTGGGAGGAGCC  1406

Query    1  -----------------------------------------ATGGAGTCTCATTCTGTCGCCCAGACTGGAGTG  33
                                                     |..|.||||||.|||||||||||||||||||||
Sbjct 1407  TGTATTTTGTTTTTTGTTTGTTTGTTTGTTTGTTTTTTGAGACAGGGTCTCACTCTGTCGCCCAGACTGGAGTG  1480

Query   34  AAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGG-TCAAGCGATTCTCCTGCCTCGGCCTCCGGA  106
            .||.||||||||||||||||||..|||||||.||||| |.||| |||||.||||.|||||||||.||||||..|
Sbjct 1481  CAGCGGCATGATCTCGGCTCACCACAACCTCCGCCTC-CCAGGCTCAAGTGATTGTCCTGCCTCAGCCTCCCTA  1553

Query  107  GTAGCTGGGATTACAGGCA--CA-CGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTT  177
            |||||||||||||||||||  || |.||||  ||||||.|||| |||||||||||||||.||||||||||||||
Sbjct 1554  GTAGCTGGGATTACAGGCATCCACCACAAC--TGCCCGACTAA-TTTTTTTGTATTTTTGGTAGAGATGGGGTT  1624

Query  178  TCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG--------------------------------  219
            .||||||||||.|||||||||.||.||.|||||||||||||.                                
Sbjct 1625  CCACCATGTTGACCAGGCTGGCCTTGAGCTCCTGACCTCAAATGATCCACTCGCCTCAGCCTCCCAAAGTTCTG  1698

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1699  GGATTACAAGCATGAGTCACTGCACCCAGCCTAGCCTACATTTTTTTTTAACAACACCCATTTTTTTTTTTTTT  1772

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1773  TTTTGAGACAAAGTTTTGCTCTTGTTGCCCGGGCTGGAGTGCAATGGCGTGATCTTGGCTCACTGCAACCTCTG  1846

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1847  CCTCCCGGTTCAAGTGATTCTCCCGCCTCAGCCTCCCGAGTAGCTGAGATTACAGGCATTCGCCACCATGCCCC  1920

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1921  ACTAATTTCGTATTTTTAGTAGAGACGGGGTTTCTCCATGTTGGTCAGGCTTATCTCGGCCTCAGGTGATCCAC  1994

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1995  CCACCTCAGCCTCCTAAAGTACTGGGATTACAGGCATGAGCCACTGCACCTGGCCACCCCATGCTACCAACTTC  2068

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2069  TAATCACAATAACTGTTGACTCTGTGCTTGTGTGTTCCATTCTGTGTGTGAGTGGAATGTGGTAGAGGTGACCC  2142

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2143  TCCCTGGGCCGGCTGATTCCTCTCCCTTTTCACCTGGTCACCGCCACTCGTAGAAGCAGGACCAGTAAGGGACT  2216

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2217  TCAATTAGAAAACAAAACAAGACAGATTATAGGAATAGCAGATGTAGAGAAAAAACACTACCTCTAGGGCCGAG  2290

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2291  GCAAAATATTCAAGGAAGACAAGCTTGGACGAAGCCTCCCCTCCAAGGCTGAGATGCACATCGTTGATGAAAGA  2364

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2365  TGTGGCCACTGGATGGGATAAGAGTTTGCTGAGGTGCTGCAGACCATGGCTGGCAAGCAGAAAACCACCTGCTG  2438

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2439  GGTGCTGGGGAAACTTTCCAGGAAGCCTCCTGTTGGGGTGACAGTGAACCTTCCAGGAGGGTTCACATCTCTGG  2512

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2513  GTCTCCCACTGGCCCCACCAGCTGCAGTATTGCAGGAGCAAGAGGAAAAACACTGGGACCAGGAAGAAAGCCTC  2586

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2587  TGCCACTTGCAATGTCCCTCAGTGGCTGGCTACTGACAAAACGTAACATCGTGGCAGGTGGCAAGGGAGGAACA  2660

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2661  TTTACAGAGTCCATCTCTGATGTCACCAGCAGGGCCAGGAAGGGTTGATCTGGAGCTTGGAGGCCATACATCAG  2734

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2735  TAACTGGTTCAAATGGGACACTCCACAGTGGAAGAGCCAGTCCAACTAGATACATGACCTGTGAAAGTGCATGC  2808

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2809  ATGGAGGCCATTATCTTAAGCCAATTAATGCAGGAACAGAAAACCAAACACCACATGCTCTCACCCATAAGTGG  2882

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2883  GAGCTAAACATTGGATACACATGGACACAAAGATAGAAACAACAGACCCCGGGAACTACTAGAGTGGGGAGAGA  2956

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2957  GGGAGGAGACCAAGGGCTGAAAAACTACCTGTTTGTTACTATGCTCTTTACCTGGGTAATGGGATCATTTGTAG  3030

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3031  CCCAAAGCCTCCATGTTGCTGGAAAGGACATGATTTCATATATATATATGTATGTGTGTATATATACATACATA  3104

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3105  TATATATATACACATATATATATATATTTTTTTTTTGAGACGGAGTCTTGCTCTGTCACCCAGGCTCGAGTGCA  3178

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3179  GTGATGCTATCTCGGCGCACTGCAACCTCTGCCTCCCGGGTTCAAGCAATTCTCCTGCCTCATCCTCCCAAGTA  3252

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3253  GCTGGCATTACAGGCACATGTCACCACACCCAGCTAATTTCTTTTGTATTTTAATATAGACGGGGTTTCACCGT  3326

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3327  GTTGCCCAGGTTGGTCTCCCGAGCTCAGGCAATCCACCTGCCTTGATGGGCACCTAGGTTGGTTTCACGTCCTT  3400

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3401  GCTGTTGTGACTGGTGCTGCGATGTACATATGAGTGCATGTTTTTTTGGTAGAATGATTTGTTTTCCTTTGGGT  3474

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3475  ACATACCCAGTAACGGGATTGCTGCATCGAATGGTAGTTGTGTTTTCAGTTCTTTGAGAAATCTCCCACATTTT  3548

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3549  GAATCACATGTTTTAATTTTCAGATATATGACAACCTCCCCACACAGCCTATATTTTTGCTTCATTATTCCTAT  3622

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3623  TTTTATTTGTACATAAATTAGGTCACTTTCCTGCCCTGATCTACTGAAACTTCTAAATTTGCTACTTCCAAAGT  3696

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3697  CAATGCCAAATTCAGACTGGCTTTGGTCAGGGGAGGAAGTTAGGCAAGCCAGGATAAAAATTTAGTCTGGCCCA  3770

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3771  ACAACCTCCTCAGGAATGCGGGTTTAGTCTTAGCTCCTCCATTCCCTGGGACAATTATACTTGATTTCAAGTCA  3844

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3845  GGTTTTCTTAATTCCCAGTCAGCTGCTGTCACACTAACTGTCATTTGTTCTTTTATAAACTAGAAGATTTGCAG  3918

Query  220  ---------------------  219
                                 
Sbjct 3919  ATTAAAAAAAAAAAAGAAAAA  3939

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