Nucleotide Global Alignment
Description
- Query:
- TRCN0000478282
- Subject:
- NR_136510.2
- Aligned Length:
- 4622
- Identities:
- 193
- Gaps:
- 4408
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACTTTTGATGGGTTCCGGGTCCCAAAAGGGTTCGAGGCCTCTTGCCTTCGCTCCGTAGGAGGGAGTTCTCTTCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCCCTGGGGGCCGCAGGACTGTCCAGGAATACAGTTTCCAGGTGAGATCTTACTTGAAACACCGGTAGTTCTA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCACAGCTAAAATGGCATCTACTTGGGCTATCCAGGCCCACATGGACCAGGATGAACCTTTGGAAGTAAAGATA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAGGAAGAGAAATATACCACCAGACAGGATTGGGACCTGCGTAAAAACAACACCCATAGCAGAGAGGTCTTCCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCAGTACTTCAGACAGTTCTGCTACCAGGAGACATCTGGTCCCCGTGAGGCTTTGAGCCGACTCCGAGAACTTT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCCATCAGTGGCTGAGGCCAGAGACCCACACCAAAGAACAGATTCTGGAGCTGCTGGTGCTGGAGCAGTTCCTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACCATCCTACCTGAGGAGCTCCAGGCCTGGGTGCAGGAGCAGCATCCAGAGAGTGGGGAGGAGGTGGTGACTGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCTGGAGGATTTAGAGAGAGAACTGGATGAACCAGGAGAGCAGAGTGAGTCTGTCAGCTACATCTCATTTTCCT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CAGGTCTCAGTCCACACTGGGGAACAGGAAATGTTCTTGCAGGAGACGGTACGTCTACGAAAAGAAGGAGAACC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CAGTATGTCCCTCCAGTCCATGAAAGCCCAGCCAAAGTATGAATCTCCAGAACTTGAATCCCAACAGGAGCAAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TTTTAGATGTTGAGACTGGAAATGAGTATGGGAATTTAAAGCAAGAAGTTTCTGAAGAAATGGAACCACATGGG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AAGACATCCAGTAAATTTGAAAATGATATGTCCAAGTCTGCTAGGTGTGGAGAAACTCGTGAACCTGAAGAAAT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AACAGAAGAGCCCTCTGCTTGCTCCAGAGAAGATAAACAACCTACCTGTGATGAAAATGGAGTAAGCCTGACTG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGAACTCTGACCATACTGAACATCAGAGAATCTGTCCAGGAGAAGAATCTTACGGATGTGATGACTGTGGAAAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GCTTTTAGTCAGCACTCACACCTCATAGAACATCAGAGGATCCATACTGGAGATAGACCCTACAAATGCGAAGA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ATGTGGAAAAGCTTTCCGTGGGAGAACTGTGCTTATTCGACACAAAATAATACACACTGGAGAGAAACCGTATA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AGTGTAATGAATGTGGCAAAGCCTTTGGCCGGTGGTCAGCTCTTAACCAACATCAGAGACTTCACACAGGAGAA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AAACACTATCACTGTAATGACTGTGGCAAAGCCTTTAGTCAGAAAGCAGGCCTCTTTCACCATATCAAGATCCA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CACAAGAGACAAACCTTATCAGTGCACTCAGTGTAATAAAAGTTTTAGTCGGCGTTCCATACTTACTCAGCATC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AAGGAGTTCATACCGGCGCCAAGCCGTATGAGTGCAACGAGTGTGGAAAAGCCTTTGTTTATAACTCATCCCTT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GTTTCCCATCAGGAAATCCACCACAAAGAAAAATGCTATCAGTGTAAGGAATGTGGGAAATCCTTCAGTCAGAG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TGGCCTTATTCAGCATCAGAGAATTCACACTGGGGAAAAACCCTACAAATGTGACGTATGTGAAAAAGCCTTTA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TTCAAAGGACAAGTCTTACAGAACATCAGCGAATTCACACTGGAGAAAGACCCTATAAATGTGATAAGTGTGGG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AAGGCGTTTACTCAAAGATCAGTCCTCACGGAACATCAGAGAATCCACACTGGAGAGAGGCCCTACAAGTGTGA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TGAGTGTGGGAATGCCTTCCGAGGAATCACCAGCCTCATTCAGCATCAGAGAATCCACACTGGGGAGAAGCCCT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 ACCAATGTGATGAGTGTGGAAAAGCCTTCAGACAGAGGTCAGATCTTAGTAAACACCAGAGAATCCATAATAGA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CGTGGTACCTATGTATGTAAAGAGTGTGGGAAATCATTCAGGCAGAACTCAGCTCTTACTCAACATCAGACTAT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CCACAAAGGAGAAAAATCTGTTTCTGTGTGATGACTACAGGGAAGTTATCTCACAGAGTTCAGGCCGGTAAACA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AGACATTAAGTGTTTAAGGCAAAAAGCATGGAGAGGTTGGGGAAGAGCCAAGTTTCTAAAGTAATGAAAAGTGA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GGAAGAAGACCAGCTACAAGGAAATACTTCTGAAAAATCACTCTGAACCCCAAGCTGGAGTGAATCTTCTCCTG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 AGCTCTCTCATTCCAGAATGGCAATCTTGTTTCAGGAGAGATCTCTAATAGTGACTGATGGTAAAGGAAGAAGG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CTGTGCCTAGAACAAAGAATCAGGCTGGCAAAGAAATCACAGGTCTTTCCTCAAACTTTAAATTGCTACTCTCT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GGAGATAGCTACCTGGACTTTACAGAGCTGTCAGAAGACTTGGGAAGGTTTGCCAGCATTGGAAAAAGCCACTT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GGACTTCACAGAGCTGTCAGAAGACTTAGGAAGCTTTGCCAGTAGTTCCTGAGACCAGAAATACATATTATGAA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GCAGGTGCTGGAACAGGCCCTGGCCCCTACTTGTGAAGCTGCAGATATAGATGGTGTTACTGAGAAGGAAACTA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 AGGACTTGGCTCCAAAACAAAACAAAACAAAATCTGGAGATGCTGAATTTTGTTGGGGGGAATGTCTGTAGAAC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TGCAACATCAATGCAGTAAGTGTAGTAAAAGCTTTAGTTTATGGTGAGTCATTACTCAGCATCATGGAGTCCAC 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 GATGAAGAGAATCTCTTTTCAATCTGTGCAATCAACAAGTTTTTGAAAGGCTTTTGTTTATAGTGGAACCCTCT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TTTCCCCCTAGAAGAACCACCACAAGGAAAAATGCTGTCACCATAAGGAATGTGGGAAAGTTTTCAGCCACATG 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GCCTTATTTGACTTCAAAGAATCCACATGAGAGAGAGACTGCATAAATGTAATAACTGAGGAGGCCTTTGTTCA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 GCAAAGAAACCTTATACAAACTCGTATAAAGAATGTAGGAAGACCTTCACCCAGAAGCCAGGACTGACTGTGCA 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 CCAGAGAATCTGCACAATAAACATGATGAATGTGGAGATGCTTGCTTCAGCATTGGAGAATTCACAGTAAAGGG 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 AAACCCTGCCAGTGTGATGAGTACGGAAAAGTCTTCAGAGGTTGGAACTTGGGAAAAATCAGTGAGTGAATTCA 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 TATTAGAGAGGCTCTTATAAATGAGAGGATTGTGGAAACTTGTATAGACAGAGATCAGACCTCAACAAGGGAGC 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 CTCCACAGTATTGAAAAGTTAATATAATTAATGTAAGTGGGCAAGTTGTATGGGGAATGGGTAGTCTAAATTGC 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 TCATTTTAGCCAGTAAAAACATTAAATTAGTTTCTTAGATCAAGAAAAGGAAATGTTAGAAGTTATTTTTCCCT 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 TCCAGAGGGGTCTATATGTGTAAGCAACCAGGACTTTTGAAATAAGTTGCATCTCTGGATTTGTGATCTGTCTC 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 CTGGATGATTATCTCTGTTTTGGGAGACAGGTATTTTTTCTTCATGCCTGCTCTAGTCTCATCTCATATCTTTA 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 ATTCATTCAGCAAGTATACACAATAGTATTATCGTCTACTGTTTGTTGTAAATATATATATATTATTTTCTTTT 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 TGGTCTGAGTAGGCTTGTATTGGTACCCTAGGACATAAAAATCACATATATCATGTTTCAGTAAATGCAGTGAA 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 AGGAACTATATTATTAAATTGCTGGGAATTTCTGTAAATTTGAGACTACCTTTATATTCTCCAACACAAGACCG 3774
Query 1 ------------------------------------------------------------------ATGGAGTC 8
||||||||
Sbjct 3775 TGTAGGTGTCCCTTCAGAGAGTATATTTTTCTAGCTTGGCTTCTTTATTTTCTTTATTTTTTTGAGATGGAGTC 3848
Query 9 T--CATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGG-TCA 79
| | |.|||||||||||.||||||||.|.|||||.||||||||||||||||||||||.||||| |.||| |||
Sbjct 3849 TTGC-TCCTGTCGCCCAGGCTGGAGTGCAATGGCACGATCTCGGCTCACTGCAACCTCCGCCTC-CCAGGTTCA 3920
Query 80 AGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTT 153
||.||||||||||.|||.|.||||.||||||||||||||||||||||..||.|||||.|||.||||| ||||
Sbjct 3921 AGTGATTCTCCTGTCTCAGTCTCCCGAGTAGCTGGGATTACAGGCACTTGCCACCATTCCCAGCTAA---TTTT 3991
Query 154 TGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG-------- 219
|||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||...|
Sbjct 3992 TGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTTGTGATCTGCCC 4065
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4066 ACCTTGGCCTCCCAAAGTTCAGGGATTACAGGCATGAGCCACCATGCCCGGCTGTTTTTTTAAGATAGAAAAAT 4139
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4140 ATACTTCATGTATAGCCTATTGACAGATAATGACTGATATTTTTTCTTATAGATAACACATAATAAACATTGTG 4213
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4214 AAGACTAATAAGTAACTTGCTTATTCTTTTCAGTTCTAAAACCTGTAGGAAAGAATCTTTAGAAGCTGTCAACA 4287
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4288 AGTTGATAATGTAGCCCAATCTCTACCCATGATAGGAGAGTAAGGCTTATATATTTTATAGTAGGGCACTAAAT 4361
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4362 ACAGGAACCATGTATTTAAAAACTTTTTAGTGATTATCTCAGAATTCTAGGTGTCCCTCTGCTGTACATCCCTA 4435
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4436 AATTTTTTGCATAGGTATTATTAATAAATTCATTATTTTCAAAGATGGACTGTGTTCTGTAAAAAGCTTTTCCA 4509
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4510 GTATCTGCAAATCACACAGTTTTTTTTAACTCTATTACTATTATATAAAATGATTTCTTAATATTGAACCAACC 4583
Query 220 ---------------------------------- 219
Sbjct 4584 TTGCATTCCTAGAATAAACCTCACTTAGCCATGA 4617
